Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC1.24□□□□□ -2.21
Sf3b1Q99NB9 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.24□□□□□ -2.21
Sf3b1Q99NB9 Gm24163-201ENSMUST00000093660 132 ntBASIC1.24□□□□□ -2.21
Sf3b1Q99NB9 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.24□□□□□ -2.21
Sf3b1Q99NB9 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC1.23□□□□□ -2.21
Sf3b1Q99NB9 Gm16358-201ENSMUST00000146046 210 ntBASIC1.23□□□□□ -2.21
Sf3b1Q99NB9 Gm22537-201ENSMUST00000158172 199 ntBASIC1.23□□□□□ -2.21
Sf3b1Q99NB9 Gm24211-201ENSMUST00000158264 107 ntBASIC1.23□□□□□ -2.21
Sf3b1Q99NB9 Gm22164-201ENSMUST00000158413 106 ntBASIC1.23□□□□□ -2.21
Sf3b1Q99NB9 Gm24277-201ENSMUST00000158661 104 ntBASIC1.23□□□□□ -2.21
Sf3b1Q99NB9 Gm23921-201ENSMUST00000175258 107 ntBASIC1.23□□□□□ -2.21
Sf3b1Q99NB9 Gm28288-201ENSMUST00000191019 214 ntBASIC1.23□□□□□ -2.21
Sf3b1Q99NB9 Gm34139-201ENSMUST00000196166 294 ntBASIC1.23□□□□□ -2.21
Sf3b1Q99NB9 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.23□□□□□ -2.21
Sf3b1Q99NB9 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.23□□□□□ -2.21
Sf3b1Q99NB9 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Sf3b1Q99NB9 Gm24966-201ENSMUST00000082443 79 ntBASIC1.23□□□□□ -2.21
Sf3b1Q99NB9 Snord96a-201ENSMUST00000082791 81 ntBASIC1.23□□□□□ -2.21
Sf3b1Q99NB9 Gm24043-201ENSMUST00000083108 116 ntBASIC1.23□□□□□ -2.21
Sf3b1Q99NB9 Mir196b-201ENSMUST00000083509 85 ntBASIC1.23□□□□□ -2.21
Sf3b1Q99NB9 Mir496a-201ENSMUST00000093627 79 ntBASIC1.23□□□□□ -2.21
Sf3b1Q99NB9 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.23□□□□□ -2.21
Sf3b1Q99NB9 Gm14922-201ENSMUST00000121131 163 ntBASIC1.22□□□□□ -2.21
Sf3b1Q99NB9 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
Sf3b1Q99NB9 Gm26038-201ENSMUST00000158151 106 ntBASIC1.22□□□□□ -2.21
Sf3b1Q99NB9 Gm24818-201ENSMUST00000175093 161 ntBASIC1.22□□□□□ -2.21
Sf3b1Q99NB9 Gm27711-201ENSMUST00000183802 118 ntBASIC1.22□□□□□ -2.21
Sf3b1Q99NB9 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC1.22□□□□□ -2.21
Sf3b1Q99NB9 AC125167.1-201ENSMUST00000198698 141 ntBASIC1.22□□□□□ -2.21
Sf3b1Q99NB9 AC125311.1-201ENSMUST00000226950 220 ntBASIC1.22□□□□□ -2.21
Sf3b1Q99NB9 Gm23055-201ENSMUST00000082805 94 ntBASIC1.22□□□□□ -2.21
Sf3b1Q99NB9 Gm24038-201ENSMUST00000082872 159 ntBASIC1.22□□□□□ -2.21
Sf3b1Q99NB9 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.22□□□□□ -2.21
Sf3b1Q99NB9 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.21□□□□□ -2.22
Sf3b1Q99NB9 Gm14574-201ENSMUST00000120644 279 ntBASIC1.21□□□□□ -2.22
Sf3b1Q99NB9 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.21□□□□□ -2.22
Sf3b1Q99NB9 Gm23339-201ENSMUST00000158962 139 ntBASIC1.21□□□□□ -2.22
Sf3b1Q99NB9 Gm26400-201ENSMUST00000175012 85 ntBASIC1.21□□□□□ -2.22
Sf3b1Q99NB9 Gm25069-201ENSMUST00000175238 86 ntBASIC1.21□□□□□ -2.22
Sf3b1Q99NB9 Mir7093-201ENSMUST00000184195 101 ntBASIC1.21□□□□□ -2.22
Sf3b1Q99NB9 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.21□□□□□ -2.22
Sf3b1Q99NB9 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
Sf3b1Q99NB9 Gm43250-201ENSMUST00000196536 273 ntBASIC1.21□□□□□ -2.22
Sf3b1Q99NB9 Gm18188-201ENSMUST00000219386 478 ntBASIC1.21□□□□□ -2.22
Sf3b1Q99NB9 Rny3-201ENSMUST00000083011 102 ntBASIC1.21□□□□□ -2.22
Sf3b1Q99NB9 Gm26329-201ENSMUST00000093723 110 ntBASIC1.21□□□□□ -2.22
Sf3b1Q99NB9 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Sf3b1Q99NB9 Gm13967-201ENSMUST00000120404 380 ntBASIC1.2□□□□□ -2.22
Sf3b1Q99NB9 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC1.2□□□□□ -2.22
Sf3b1Q99NB9 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC1.2□□□□□ -2.22
Sf3b1Q99NB9 Gm37713-201ENSMUST00000191746 198 ntBASIC1.2□□□□□ -2.22
Sf3b1Q99NB9 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC1.2□□□□□ -2.22
Sf3b1Q99NB9 Gm34783-201ENSMUST00000209159 303 ntBASIC1.2□□□□□ -2.22
Sf3b1Q99NB9 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC1.2□□□□□ -2.22
Sf3b1Q99NB9 AC163033.1-201ENSMUST00000218608 157 ntBASIC1.2□□□□□ -2.22
Sf3b1Q99NB9 Snord1a-201ENSMUST00000083160 74 ntBASIC1.2□□□□□ -2.22
Sf3b1Q99NB9 Gm24261-201ENSMUST00000083744 104 ntBASIC1.2□□□□□ -2.22
Sf3b1Q99NB9 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.2□□□□□ -2.22
Sf3b1Q99NB9 Gm26339-201ENSMUST00000102368 99 ntBASIC1.19□□□□□ -2.22
Sf3b1Q99NB9 Mir1904-201ENSMUST00000122702 80 ntBASIC1.19□□□□□ -2.22
Sf3b1Q99NB9 Gm22485-201ENSMUST00000157990 109 ntBASIC1.19□□□□□ -2.22
Sf3b1Q99NB9 Gm24942-201ENSMUST00000158328 114 ntBASIC1.19□□□□□ -2.22
Sf3b1Q99NB9 Gm22663-201ENSMUST00000158721 102 ntBASIC1.19□□□□□ -2.22
Sf3b1Q99NB9 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC1.19□□□□□ -2.22
Sf3b1Q99NB9 Gm25929-201ENSMUST00000082784 107 ntBASIC1.19□□□□□ -2.22
Sf3b1Q99NB9 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.19□□□□□ -2.22
Sf3b1Q99NB9 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.19□□□□□ -2.22
Sf3b1Q99NB9 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
Sf3b1Q99NB9 Gm25274-201ENSMUST00000104296 135 ntBASIC1.18□□□□□ -2.22
Sf3b1Q99NB9 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Sf3b1Q99NB9 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Sf3b1Q99NB9 Gm12449-201ENSMUST00000117572 234 ntBASIC1.18□□□□□ -2.22
Sf3b1Q99NB9 Gm22279-201ENSMUST00000157200 93 ntBASIC1.18□□□□□ -2.22
Sf3b1Q99NB9 Gm25982-201ENSMUST00000157920 101 ntBASIC1.18□□□□□ -2.22
Sf3b1Q99NB9 Gm25976-201ENSMUST00000158695 130 ntBASIC1.18□□□□□ -2.22
Sf3b1Q99NB9 Gm16399-201ENSMUST00000181423 219 ntBASIC1.18□□□□□ -2.22
Sf3b1Q99NB9 Gm27656-201ENSMUST00000185055 80 ntBASIC1.18□□□□□ -2.22
Sf3b1Q99NB9 Gm42719-201ENSMUST00000197393 355 ntBASIC1.18□□□□□ -2.22
Sf3b1Q99NB9 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.18□□□□□ -2.22
Sf3b1Q99NB9 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.18□□□□□ -2.22
Sf3b1Q99NB9 Gm23245-201ENSMUST00000083370 135 ntBASIC1.18□□□□□ -2.22
Sf3b1Q99NB9 Mir155-201ENSMUST00000083463 65 ntBASIC1.18□□□□□ -2.22
Sf3b1Q99NB9 Gm25513-201ENSMUST00000083861 162 ntBASIC1.18□□□□□ -2.22
Sf3b1Q99NB9 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.18□□□□□ -2.22
Sf3b1Q99NB9 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Sf3b1Q99NB9 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.17□□□□□ -2.22
Sf3b1Q99NB9 Gm26914-201ENSMUST00000182262 223 ntBASIC1.17□□□□□ -2.22
Sf3b1Q99NB9 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC1.17□□□□□ -2.22
Sf3b1Q99NB9 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.17□□□□□ -2.22
Sf3b1Q99NB9 Mir7661-201ENSMUST00000197023 61 ntBASIC1.17□□□□□ -2.22
Sf3b1Q99NB9 Gm24494-201ENSMUST00000083804 81 ntBASIC1.17□□□□□ -2.22
Sf3b1Q99NB9 Gm12080-201ENSMUST00000119821 1883 ntBASIC1.17□□□□□ -2.22
Sf3b1Q99NB9 Gm25170-201ENSMUST00000104191 129 ntBASIC1.16□□□□□ -2.22
Sf3b1Q99NB9 Gm23705-201ENSMUST00000104370 130 ntBASIC1.16□□□□□ -2.22
Sf3b1Q99NB9 Gm22149-201ENSMUST00000104442 136 ntBASIC1.16□□□□□ -2.22
Sf3b1Q99NB9 Gm22598-201ENSMUST00000157600 127 ntBASIC1.16□□□□□ -2.22
Sf3b1Q99NB9 Gm25884-201ENSMUST00000157782 62 ntBASIC1.16□□□□□ -2.22
Sf3b1Q99NB9 Gm23277-201ENSMUST00000157914 136 ntBASIC1.16□□□□□ -2.22
Sf3b1Q99NB9 Gm22944-201ENSMUST00000158662 133 ntBASIC1.16□□□□□ -2.22
Sf3b1Q99NB9 Gm23419-201ENSMUST00000175523 84 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms