Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Msh4Q99MT2 Gm23892-201ENSMUST00000158105 130 ntBASIC2.07□□□□□ -2.08
Msh4Q99MT2 Gm23542-201ENSMUST00000158208 96 ntBASIC2.07□□□□□ -2.08
Msh4Q99MT2 Gm26022-201ENSMUST00000158663 108 ntBASIC2.07□□□□□ -2.08
Msh4Q99MT2 Gm22666-201ENSMUST00000158717 164 ntBASIC2.07□□□□□ -2.08
Msh4Q99MT2 Gm23141-201ENSMUST00000178682 94 ntBASIC2.07□□□□□ -2.08
Msh4Q99MT2 Gm9156-201ENSMUST00000189660 463 ntBASIC2.07□□□□□ -2.08
Msh4Q99MT2 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.07□□□□□ -2.08
Msh4Q99MT2 Snora69-201ENSMUST00000083708 131 ntBASIC2.07□□□□□ -2.08
Msh4Q99MT2 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Msh4Q99MT2 Gm25094-201ENSMUST00000103992 131 ntBASIC2.06□□□□□ -2.08
Msh4Q99MT2 Gm11204-201ENSMUST00000122438 147 ntBASIC2.06□□□□□ -2.08
Msh4Q99MT2 Gm24632-201ENSMUST00000122770 323 ntBASIC2.06□□□□□ -2.08
Msh4Q99MT2 Gm22554-201ENSMUST00000157798 147 ntBASIC2.06□□□□□ -2.08
Msh4Q99MT2 Mir1951-201ENSMUST00000157981 89 ntBASIC2.06□□□□□ -2.08
Msh4Q99MT2 Gm22768-201ENSMUST00000158366 153 ntBASIC2.06□□□□□ -2.08
Msh4Q99MT2 Gm22159-201ENSMUST00000158412 130 ntBASIC2.06□□□□□ -2.08
Msh4Q99MT2 Gm25368-201ENSMUST00000158847 131 ntBASIC2.06□□□□□ -2.08
Msh4Q99MT2 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC2.06□□□□□ -2.08
Msh4Q99MT2 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC2.06□□□□□ -2.08
Msh4Q99MT2 Snora19-201ENSMUST00000082962 132 ntBASIC2.06□□□□□ -2.08
Msh4Q99MT2 Gm23658-201ENSMUST00000083233 132 ntBASIC2.06□□□□□ -2.08
Msh4Q99MT2 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.06□□□□□ -2.08
Msh4Q99MT2 Gm24079-201ENSMUST00000104352 132 ntBASIC2.05□□□□□ -2.08
Msh4Q99MT2 Gm24374-201ENSMUST00000104394 106 ntBASIC2.05□□□□□ -2.08
Msh4Q99MT2 Gm23854-201ENSMUST00000158378 108 ntBASIC2.05□□□□□ -2.08
Msh4Q99MT2 Gm26426-201ENSMUST00000177866 123 ntBASIC2.05□□□□□ -2.08
Msh4Q99MT2 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Msh4Q99MT2 Gm26060-201ENSMUST00000180094 123 ntBASIC2.05□□□□□ -2.08
Msh4Q99MT2 Ighv12-2-201ENSMUST00000191949 362 ntBASIC2.05□□□□□ -2.08
Msh4Q99MT2 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC2.05□□□□□ -2.08
Msh4Q99MT2 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Msh4Q99MT2 Gm43563-201ENSMUST00000196761 198 ntBASIC2.05□□□□□ -2.08
Msh4Q99MT2 Snord43-201ENSMUST00000199549 108 ntBASIC2.05□□□□□ -2.08
Msh4Q99MT2 Mir7217-201ENSMUST00000200304 62 ntBASIC2.05□□□□□ -2.08
Msh4Q99MT2 Gm44563-201ENSMUST00000207958 178 ntBASIC2.05□□□□□ -2.08
Msh4Q99MT2 Gm25813-201ENSMUST00000082748 191 ntBASIC2.05□□□□□ -2.08
Msh4Q99MT2 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Msh4Q99MT2 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.05□□□□□ -2.08
Msh4Q99MT2 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.04□□□□□ -2.08
Msh4Q99MT2 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Msh4Q99MT2 Gm12941-201ENSMUST00000117934 220 ntBASIC2.04□□□□□ -2.08
Msh4Q99MT2 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.04□□□□□ -2.08
Msh4Q99MT2 Gm24010-201ENSMUST00000157731 282 ntBASIC2.04□□□□□ -2.08
Msh4Q99MT2 Gm22093-201ENSMUST00000158980 111 ntBASIC2.04□□□□□ -2.08
Msh4Q99MT2 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC2.04□□□□□ -2.08
Msh4Q99MT2 Mir7050-201ENSMUST00000184636 60 ntBASIC2.04□□□□□ -2.08
Msh4Q99MT2 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.04□□□□□ -2.08
Msh4Q99MT2 Gm37715-201ENSMUST00000193206 235 ntBASIC2.04□□□□□ -2.08
Msh4Q99MT2 AC125167.1-201ENSMUST00000198698 141 ntBASIC2.04□□□□□ -2.08
Msh4Q99MT2 AC133598.3-201ENSMUST00000224322 568 ntBASIC2.04□□□□□ -2.08
Msh4Q99MT2 Gm42862-201ENSMUST00000197494 2621 ntBASIC2.04□□□□□ -2.08
Msh4Q99MT2 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Msh4Q99MT2 Gm13433-201ENSMUST00000121701 240 ntBASIC2.03□□□□□ -2.08
Msh4Q99MT2 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Msh4Q99MT2 Gm22433-201ENSMUST00000158550 142 ntBASIC2.03□□□□□ -2.08
Msh4Q99MT2 Gm23182-201ENSMUST00000158688 135 ntBASIC2.03□□□□□ -2.08
Msh4Q99MT2 Mir3086-201ENSMUST00000175072 87 ntBASIC2.03□□□□□ -2.08
Msh4Q99MT2 Mir6388-201ENSMUST00000184417 75 ntBASIC2.03□□□□□ -2.08
Msh4Q99MT2 Gm6105-201ENSMUST00000200580 624 ntBASIC2.03□□□□□ -2.08
Msh4Q99MT2 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.03□□□□□ -2.08
Msh4Q99MT2 Gm24042-201ENSMUST00000083114 103 ntBASIC2.03□□□□□ -2.08
Msh4Q99MT2 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
Msh4Q99MT2 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
Msh4Q99MT2 Gm24121-201ENSMUST00000102029 106 ntBASIC2.02□□□□□ -2.09
Msh4Q99MT2 Gm22145-201ENSMUST00000157396 148 ntBASIC2.02□□□□□ -2.09
Msh4Q99MT2 Gm25371-201ENSMUST00000158162 101 ntBASIC2.02□□□□□ -2.09
Msh4Q99MT2 Gm22664-201ENSMUST00000158719 105 ntBASIC2.02□□□□□ -2.09
Msh4Q99MT2 Gm23548-201ENSMUST00000158963 106 ntBASIC2.02□□□□□ -2.09
Msh4Q99MT2 Gm16584-201ENSMUST00000159267 189 ntBASIC2.02□□□□□ -2.09
Msh4Q99MT2 Gm27979-201ENSMUST00000185126 56 ntBASIC2.02□□□□□ -2.09
Msh4Q99MT2 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC2.02□□□□□ -2.09
Msh4Q99MT2 Gm18617-201ENSMUST00000222311 259 ntBASIC2.02□□□□□ -2.09
Msh4Q99MT2 Mir30d-201ENSMUST00000083503 82 ntBASIC2.02□□□□□ -2.09
Msh4Q99MT2 Mir301-201ENSMUST00000083655 86 ntBASIC2.02□□□□□ -2.09
Msh4Q99MT2 Mir107-201ENSMUST00000083660 87 ntBASIC2.02□□□□□ -2.09
Msh4Q99MT2 Mir151-201ENSMUST00000083678 68 ntBASIC2.02□□□□□ -2.09
Msh4Q99MT2 Snora33-201ENSMUST00000093556 129 ntBASIC2.02□□□□□ -2.09
Msh4Q99MT2 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Msh4Q99MT2 Gm23466-201ENSMUST00000157133 106 ntBASIC2.01□□□□□ -2.09
Msh4Q99MT2 Gm25113-201ENSMUST00000157185 143 ntBASIC2.01□□□□□ -2.09
Msh4Q99MT2 Gm24237-201ENSMUST00000157790 132 ntBASIC2.01□□□□□ -2.09
Msh4Q99MT2 Gm23258-201ENSMUST00000158319 106 ntBASIC2.01□□□□□ -2.09
Msh4Q99MT2 Gm22264-201ENSMUST00000178200 107 ntBASIC2.01□□□□□ -2.09
Msh4Q99MT2 Gm27959-201ENSMUST00000185172 111 ntBASIC2.01□□□□□ -2.09
Msh4Q99MT2 Mir7116-201ENSMUST00000195956 70 ntBASIC2.01□□□□□ -2.09
Msh4Q99MT2 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.01□□□□□ -2.09
Msh4Q99MT2 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC2.01□□□□□ -2.09
Msh4Q99MT2 AC126672.1-201ENSMUST00000217096 396 ntBASIC2.01□□□□□ -2.09
Msh4Q99MT2 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC2.01□□□□□ -2.09
Msh4Q99MT2 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.01□□□□□ -2.09
Msh4Q99MT2 Gm22421-201ENSMUST00000083058 107 ntBASIC2.01□□□□□ -2.09
Msh4Q99MT2 Gm25513-201ENSMUST00000083861 162 ntBASIC2.01□□□□□ -2.09
Msh4Q99MT2 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.01□□□□□ -2.09
Msh4Q99MT2 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Msh4Q99MT2 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2□□□□□ -2.09
Msh4Q99MT2 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2□□□□□ -2.09
Msh4Q99MT2 n-R5s187-201ENSMUST00000122769 111 ntBASIC2□□□□□ -2.09
Msh4Q99MT2 Gm23101-201ENSMUST00000157550 137 ntBASIC2□□□□□ -2.09
Msh4Q99MT2 Ear-ps4-201ENSMUST00000166834 450 ntBASIC2□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms