| Crtc3 | Q91X84 | Gm37557-201 | ENSMUST00000191640 | 139 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Mucl1-202 | ENSMUST00000226484 | 758 nt | APPRIS P5 BASIC | 2.15 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm23246-201 | ENSMUST00000083371 | 67 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Zfp160-201 | ENSMUST00000088811 | 3791 nt | APPRIS P1 TSL 1 (best) BASIC | 2.14 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm7173-205 | ENSMUST00000197180 | 9412 nt | APPRIS ALT2 TSL 5 BASIC | 2.14 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Mir767-201 | ENSMUST00000103256 | 107 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm26018-201 | ENSMUST00000104406 | 128 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm14748-201 | ENSMUST00000119819 | 411 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm6829-201 | ENSMUST00000119858 | 360 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm23535-201 | ENSMUST00000157542 | 106 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm22767-201 | ENSMUST00000158365 | 165 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Snord11-201 | ENSMUST00000158468 | 84 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm24053-201 | ENSMUST00000158620 | 105 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm7592-201 | ENSMUST00000160674 | 627 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm25457-201 | ENSMUST00000179509 | 107 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm27793-201 | ENSMUST00000183405 | 76 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Mir6376-201 | ENSMUST00000185149 | 131 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | AC163289.1-201 | ENSMUST00000215919 | 262 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm24283-201 | ENSMUST00000104233 | 107 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm26342-201 | ENSMUST00000104557 | 129 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm16561-201 | ENSMUST00000163001 | 192 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Mir6905-201 | ENSMUST00000184228 | 70 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Trbv18-201 | ENSMUST00000194256 | 294 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm44352-201 | ENSMUST00000196358 | 110 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm5002-201 | ENSMUST00000207145 | 223 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | AC158597.1-201 | ENSMUST00000216234 | 150 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | CU062626.2-201 | ENSMUST00000223953 | 274 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm11351-202 | ENSMUST00000225724 | 478 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm24044-201 | ENSMUST00000083107 | 156 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm26265-201 | ENSMUST00000083277 | 135 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm25789-201 | ENSMUST00000083294 | 76 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm45558-201 | ENSMUST00000209384 | 1895 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm44578-201 | ENSMUST00000207236 | 3835 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm23551-201 | ENSMUST00000116852 | 121 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm24015-201 | ENSMUST00000157725 | 232 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm25599-201 | ENSMUST00000157816 | 103 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm26482-201 | ENSMUST00000158015 | 62 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm24131-201 | ENSMUST00000158539 | 107 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Mir5118-201 | ENSMUST00000175551 | 67 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Mir466b-1-201 | ENSMUST00000177988 | 82 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm27991-201 | ENSMUST00000184804 | 137 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Mir8090-201 | ENSMUST00000185078 | 136 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm32175-201 | ENSMUST00000193641 | 346 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Mir1a-2-201 | ENSMUST00000198520 | 72 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm26379-202 | ENSMUST00000200225 | 132 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm44182-201 | ENSMUST00000204052 | 115 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm18991-201 | ENSMUST00000209225 | 746 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | AC114010.1-201 | ENSMUST00000222060 | 379 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Mir302d-201 | ENSMUST00000083513 | 66 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Vmn1r178-202 | ENSMUST00000226450 | 2880 nt | APPRIS P1 BASIC | 2.12 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Usp9y-201 | ENSMUST00000091188 | 8094 nt | APPRIS P1 TSL 1 (best) BASIC | 2.12 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm18795-201 | ENSMUST00000222371 | 3266 nt | TSL 5 BASIC | 2.12 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Vmn1r178-205 | ENSMUST00000227993 | 2518 nt | APPRIS P1 BASIC | 2.11 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Snhg14-209 | ENSMUST00000188976 | 2193 nt | TSL 1 (best) BASIC | 2.11 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Ighv9-3-201 | ENSMUST00000103473 | 351 nt | APPRIS P1 BASIC | 2.11 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm22678-201 | ENSMUST00000116974 | 101 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm14588-201 | ENSMUST00000119895 | 172 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm12926-201 | ENSMUST00000121158 | 409 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm13797-201 | ENSMUST00000121792 | 120 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm15365-201 | ENSMUST00000122392 | 300 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm23324-201 | ENSMUST00000157421 | 131 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm24900-201 | ENSMUST00000158128 | 134 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm21060-201 | ENSMUST00000179346 | 168 nt | APPRIS P1 BASIC | 2.11 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm28992-201 | ENSMUST00000190534 | 139 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | AC141895.1-201 | ENSMUST00000218141 | 273 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | AC173345.2-201 | ENSMUST00000222795 | 153 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | AC183092.1-201 | ENSMUST00000224301 | 153 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | AC165138.1-201 | ENSMUST00000226984 | 270 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | AC027184.1-201 | ENSMUST00000226991 | 424 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm25813-201 | ENSMUST00000082748 | 191 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Mir93-201 | ENSMUST00000083593 | 88 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm24698-201 | ENSMUST00000083883 | 130 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm15314-201 | ENSMUST00000120740 | 1887 nt | BASIC | 2.1 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Traj39-201 | ENSMUST00000103703 | 63 nt | APPRIS P1 BASIC | 2.1 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm25915-201 | ENSMUST00000104265 | 126 nt | BASIC | 2.1 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm22159-201 | ENSMUST00000158412 | 130 nt | BASIC | 2.1 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Mir721-201 | ENSMUST00000200230 | 88 nt | BASIC | 2.1 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | CT009696.2-201 | ENSMUST00000216668 | 432 nt | BASIC | 2.1 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | AC153646.2-201 | ENSMUST00000220516 | 109 nt | BASIC | 2.1 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | AC159632.1-201 | ENSMUST00000221808 | 317 nt | TSL 1 (best) BASIC | 2.1 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm18617-201 | ENSMUST00000222311 | 259 nt | BASIC | 2.1 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm25589-201 | ENSMUST00000082502 | 166 nt | BASIC | 2.1 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm25130-201 | ENSMUST00000082650 | 156 nt | BASIC | 2.1 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm25634-201 | ENSMUST00000082667 | 105 nt | BASIC | 2.1 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Snora69-201 | ENSMUST00000083708 | 131 nt | BASIC | 2.1 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Olfr1046-202 | ENSMUST00000213987 | 2770 nt | APPRIS P1 TSL 5 BASIC | 2.1 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Olfr1437-202 | ENSMUST00000207241 | 3751 nt | APPRIS P1 TSL 2 BASIC | 2.1 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm44527-201 | ENSMUST00000182210 | 2945 nt | TSL 2 BASIC | 2.09 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Mir344e-201 | ENSMUST00000104677 | 66 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm12449-201 | ENSMUST00000117572 | 234 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm12143-201 | ENSMUST00000119666 | 332 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Tra2b-ps-201 | ENSMUST00000119906 | 168 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm15536-201 | ENSMUST00000121411 | 114 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | n-R5s164-201 | ENSMUST00000122664 | 112 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm24440-201 | ENSMUST00000157236 | 63 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Mir1936-201 | ENSMUST00000158699 | 93 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm24512-201 | ENSMUST00000174963 | 65 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Gm22800-201 | ENSMUST00000175627 | 94 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Hmga1b-202 | ENSMUST00000178955 | 120 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| Crtc3 | Q91X84 | Vmn2r-ps20-201 | ENSMUST00000179853 | 382 nt | BASIC | 2.09 | □□□□□ -2.07 | | |