Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm14761-201ENSMUST00000121363 262 ntBASIC0.14□□□□□ -2.39
Nup35Q8R4R6 Gm24191-201ENSMUST00000157977 122 ntBASIC0.14□□□□□ -2.39
Nup35Q8R4R6 Gm25643-201ENSMUST00000158874 103 ntBASIC0.14□□□□□ -2.39
Nup35Q8R4R6 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC0.14□□□□□ -2.39
Nup35Q8R4R6 Mir6365-201ENSMUST00000183990 101 ntBASIC0.14□□□□□ -2.39
Nup35Q8R4R6 Gm27817-201ENSMUST00000184302 233 ntBASIC0.14□□□□□ -2.39
Nup35Q8R4R6 Gm37997-201ENSMUST00000193515 267 ntBASIC0.14□□□□□ -2.39
Nup35Q8R4R6 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC0.14□□□□□ -2.39
Nup35Q8R4R6 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC0.14□□□□□ -2.39
Nup35Q8R4R6 Gm43810-201ENSMUST00000201018 232 ntBASIC0.14□□□□□ -2.39
Nup35Q8R4R6 AC162934.3-201ENSMUST00000223015 841 ntBASIC0.14□□□□□ -2.39
Nup35Q8R4R6 Gm24966-201ENSMUST00000082443 79 ntBASIC0.14□□□□□ -2.39
Nup35Q8R4R6 Snord68-201ENSMUST00000082516 86 ntBASIC0.14□□□□□ -2.39
Nup35Q8R4R6 Gm26066-201ENSMUST00000083385 109 ntBASIC0.14□□□□□ -2.39
Nup35Q8R4R6 Gm23321-201ENSMUST00000104465 126 ntBASIC0.13□□□□□ -2.39
Nup35Q8R4R6 Mir872-201ENSMUST00000104728 81 ntBASIC0.13□□□□□ -2.39
Nup35Q8R4R6 Gm12837-201ENSMUST00000120131 373 ntBASIC0.13□□□□□ -2.39
Nup35Q8R4R6 Gm24517-201ENSMUST00000122560 107 ntBASIC0.13□□□□□ -2.39
Nup35Q8R4R6 Gm24379-201ENSMUST00000122695 86 ntBASIC0.13□□□□□ -2.39
Nup35Q8R4R6 Gm25968-201ENSMUST00000157167 100 ntBASIC0.13□□□□□ -2.39
Nup35Q8R4R6 Gm27475-201ENSMUST00000183420 61 ntBASIC0.13□□□□□ -2.39
Nup35Q8R4R6 Mir7065-201ENSMUST00000185110 61 ntBASIC0.13□□□□□ -2.39
Nup35Q8R4R6 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
Nup35Q8R4R6 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
Nup35Q8R4R6 Gm29817-201ENSMUST00000210098 172 ntBASIC0.13□□□□□ -2.39
Nup35Q8R4R6 Gm30155-201ENSMUST00000223458 339 ntBASIC0.13□□□□□ -2.39
Nup35Q8R4R6 Gm25697-201ENSMUST00000082902 98 ntBASIC0.13□□□□□ -2.39
Nup35Q8R4R6 Mir710-201ENSMUST00000102088 110 ntBASIC0.12□□□□□ -2.39
Nup35Q8R4R6 Gm12143-201ENSMUST00000119666 332 ntBASIC0.12□□□□□ -2.39
Nup35Q8R4R6 Gm21894-201ENSMUST00000179631 546 ntBASIC0.12□□□□□ -2.39
Nup35Q8R4R6 Gm20923-201ENSMUST00000190009 319 ntBASIC0.12□□□□□ -2.39
Nup35Q8R4R6 Gm21088-201ENSMUST00000190875 316 ntBASIC0.12□□□□□ -2.39
Nup35Q8R4R6 Gm28926-201ENSMUST00000191063 680 ntBASIC0.12□□□□□ -2.39
Nup35Q8R4R6 Gm44923-201ENSMUST00000206673 85 ntBASIC0.12□□□□□ -2.39
Nup35Q8R4R6 CT033781.2-201ENSMUST00000221113 153 ntBASIC0.12□□□□□ -2.39
Nup35Q8R4R6 Mir490-201ENSMUST00000093567 84 ntBASIC0.12□□□□□ -2.39
Nup35Q8R4R6 Gm10033-201ENSMUST00000072427 1813 ntBASIC0.11□□□□□ -2.39
Nup35Q8R4R6 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.11□□□□□ -2.39
Nup35Q8R4R6 Gm24833-201ENSMUST00000116775 120 ntBASIC0.11□□□□□ -2.39
Nup35Q8R4R6 Gm24198-201ENSMUST00000157812 108 ntBASIC0.11□□□□□ -2.39
Nup35Q8R4R6 Gm16546-201ENSMUST00000159442 355 ntBASIC0.11□□□□□ -2.39
Nup35Q8R4R6 Gm22914-201ENSMUST00000175195 77 ntBASIC0.11□□□□□ -2.39
Nup35Q8R4R6 Gm24111-201ENSMUST00000175491 97 ntBASIC0.11□□□□□ -2.39
Nup35Q8R4R6 Gm25121-201ENSMUST00000179846 79 ntBASIC0.11□□□□□ -2.39
Nup35Q8R4R6 Mir6985-201ENSMUST00000184641 61 ntBASIC0.11□□□□□ -2.39
Nup35Q8R4R6 Gm37128-201ENSMUST00000192599 232 ntBASIC0.11□□□□□ -2.39
Nup35Q8R4R6 AC157476.1-201ENSMUST00000215555 169 ntBASIC0.11□□□□□ -2.39
Nup35Q8R4R6 AC192616.3-201ENSMUST00000220797 1124 ntBASIC0.11□□□□□ -2.39
Nup35Q8R4R6 AC154636.2-201ENSMUST00000222538 161 ntBASIC0.11□□□□□ -2.39
Nup35Q8R4R6 Gm11410-201ENSMUST00000120053 1143 ntBASIC0.1□□□□□ -2.39
Nup35Q8R4R6 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC0.1□□□□□ -2.39
Nup35Q8R4R6 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
Nup35Q8R4R6 Gm18417-201ENSMUST00000176564 648 ntBASIC0.1□□□□□ -2.39
Nup35Q8R4R6 Gm17067-202ENSMUST00000180131 123 ntBASIC0.1□□□□□ -2.39
Nup35Q8R4R6 Gm36953-201ENSMUST00000195295 268 ntBASIC0.1□□□□□ -2.39
Nup35Q8R4R6 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC0.1□□□□□ -2.39
Nup35Q8R4R6 Gm45541-201ENSMUST00000210443 54 ntBASIC0.1□□□□□ -2.39
Nup35Q8R4R6 AC153141.1-201ENSMUST00000218636 501 ntBASIC0.1□□□□□ -2.39
Nup35Q8R4R6 CT009718.4-201ENSMUST00000221881 109 ntBASIC0.1□□□□□ -2.39
Nup35Q8R4R6 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.1□□□□□ -2.39
Nup35Q8R4R6 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC0.09□□□□□ -2.4
Nup35Q8R4R6 Gm22469-201ENSMUST00000104118 133 ntBASIC0.09□□□□□ -2.4
Nup35Q8R4R6 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC0.09□□□□□ -2.4
Nup35Q8R4R6 Gm11254-201ENSMUST00000122368 653 ntBASIC0.09□□□□□ -2.4
Nup35Q8R4R6 Gm23996-201ENSMUST00000158062 131 ntBASIC0.09□□□□□ -2.4
Nup35Q8R4R6 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.09□□□□□ -2.4
Nup35Q8R4R6 AC100209.2-201ENSMUST00000224461 451 ntBASIC0.09□□□□□ -2.4
Nup35Q8R4R6 Gm22809-201ENSMUST00000082743 156 ntBASIC0.09□□□□□ -2.4
Nup35Q8R4R6 Gm25404-201ENSMUST00000082970 107 ntBASIC0.09□□□□□ -2.4
Nup35Q8R4R6 Gm25789-201ENSMUST00000083294 76 ntBASIC0.09□□□□□ -2.4
Nup35Q8R4R6 AC133079.1-201ENSMUST00000220943 1881 ntBASIC0.09□□□□□ -2.4
Nup35Q8R4R6 Mir190b-201ENSMUST00000104803 80 ntBASIC0.08□□□□□ -2.4
Nup35Q8R4R6 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.08□□□□□ -2.4
Nup35Q8R4R6 Gm22733-201ENSMUST00000158094 91 ntBASIC0.08□□□□□ -2.4
Nup35Q8R4R6 Gm20391-201ENSMUST00000174722 106 ntBASIC0.08□□□□□ -2.4
Nup35Q8R4R6 Gm44488-201ENSMUST00000199467 119 ntBASIC0.08□□□□□ -2.4
Nup35Q8R4R6 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC0.08□□□□□ -2.4
Nup35Q8R4R6 Gm44948-201ENSMUST00000209050 149 ntBASIC0.08□□□□□ -2.4
Nup35Q8R4R6 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC0.08□□□□□ -2.4
Nup35Q8R4R6 AC159297.2-201ENSMUST00000219567 1075 ntBASIC0.08□□□□□ -2.4
Nup35Q8R4R6 AC104832.1-201ENSMUST00000222938 550 ntBASIC0.08□□□□□ -2.4
Nup35Q8R4R6 Mir344-201ENSMUST00000083634 95 ntBASIC0.08□□□□□ -2.4
Nup35Q8R4R6 Snord38a-201ENSMUST00000083746 71 ntBASIC0.08□□□□□ -2.4
Nup35Q8R4R6 Gm25627-201ENSMUST00000084003 153 ntBASIC0.08□□□□□ -2.4
Nup35Q8R4R6 Gm24163-201ENSMUST00000093660 132 ntBASIC0.08□□□□□ -2.4
Nup35Q8R4R6 Gm11856-201ENSMUST00000118712 276 ntBASIC0.07□□□□□ -2.4
Nup35Q8R4R6 Gm23169-201ENSMUST00000157157 112 ntBASIC0.07□□□□□ -2.4
Nup35Q8R4R6 Gm22945-201ENSMUST00000158557 157 ntBASIC0.07□□□□□ -2.4
Nup35Q8R4R6 Gm28992-201ENSMUST00000190534 139 ntBASIC0.07□□□□□ -2.4
Nup35Q8R4R6 Gm43513-201ENSMUST00000199779 1076 ntBASIC0.07□□□□□ -2.4
Nup35Q8R4R6 Gm20144-201ENSMUST00000203031 165 ntBASIC0.07□□□□□ -2.4
Nup35Q8R4R6 AC164629.1-201ENSMUST00000220250 1113 ntBASIC0.07□□□□□ -2.4
Nup35Q8R4R6 AC164297.3-201ENSMUST00000224238 94 ntBASIC0.07□□□□□ -2.4
Nup35Q8R4R6 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
Nup35Q8R4R6 Mir224-201ENSMUST00000083608 82 ntBASIC0.07□□□□□ -2.4
Nup35Q8R4R6 Gm22578-201ENSMUST00000083730 107 ntBASIC0.07□□□□□ -2.4
Nup35Q8R4R6 Gm22786-201ENSMUST00000104086 122 ntBASIC0.06□□□□□ -2.4
Nup35Q8R4R6 Mir1b-201ENSMUST00000117012 122 ntBASIC0.06□□□□□ -2.4
Nup35Q8R4R6 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC0.06□□□□□ -2.4
Nup35Q8R4R6 Gm22631-201ENSMUST00000179656 94 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms