Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm24487-201ENSMUST00000178017 63 ntBASIC0.6□□□□□ -2.31
Ccdc28aQ8CEI3 Gm44960-201ENSMUST00000207403 141 ntBASIC0.6□□□□□ -2.31
Ccdc28aQ8CEI3 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC0.6□□□□□ -2.31
Ccdc28aQ8CEI3 Gm22685-201ENSMUST00000082848 106 ntBASIC0.6□□□□□ -2.31
Ccdc28aQ8CEI3 Gm24356-201ENSMUST00000082859 106 ntBASIC0.6□□□□□ -2.31
Ccdc28aQ8CEI3 Gm24038-201ENSMUST00000082872 159 ntBASIC0.6□□□□□ -2.31
Ccdc28aQ8CEI3 Gm25789-201ENSMUST00000083294 76 ntBASIC0.6□□□□□ -2.31
Ccdc28aQ8CEI3 Gm22656-201ENSMUST00000104199 171 ntBASIC0.59□□□□□ -2.31
Ccdc28aQ8CEI3 Gm14782-201ENSMUST00000120151 195 ntBASIC0.59□□□□□ -2.31
Ccdc28aQ8CEI3 Gm11792-201ENSMUST00000120640 168 ntBASIC0.59□□□□□ -2.31
Ccdc28aQ8CEI3 n-R5s188-201ENSMUST00000122646 105 ntBASIC0.59□□□□□ -2.31
Ccdc28aQ8CEI3 Gm23114-201ENSMUST00000158478 117 ntBASIC0.59□□□□□ -2.31
Ccdc28aQ8CEI3 Gm22435-201ENSMUST00000158552 128 ntBASIC0.59□□□□□ -2.31
Ccdc28aQ8CEI3 Gm24799-201ENSMUST00000178431 79 ntBASIC0.59□□□□□ -2.31
Ccdc28aQ8CEI3 Gm27545-201ENSMUST00000184755 202 ntBASIC0.59□□□□□ -2.31
Ccdc28aQ8CEI3 Gm42719-201ENSMUST00000197393 355 ntBASIC0.59□□□□□ -2.31
Ccdc28aQ8CEI3 Gm44326-201ENSMUST00000198226 101 ntBASIC0.59□□□□□ -2.31
Ccdc28aQ8CEI3 AC125167.1-201ENSMUST00000198698 141 ntBASIC0.59□□□□□ -2.31
Ccdc28aQ8CEI3 Gm18188-201ENSMUST00000219386 478 ntBASIC0.59□□□□□ -2.31
Ccdc28aQ8CEI3 Mir216a-201ENSMUST00000083605 72 ntBASIC0.59□□□□□ -2.31
Ccdc28aQ8CEI3 Gm24261-201ENSMUST00000083744 104 ntBASIC0.59□□□□□ -2.31
Ccdc28aQ8CEI3 Gm25513-201ENSMUST00000083861 162 ntBASIC0.59□□□□□ -2.31
Ccdc28aQ8CEI3 Gm12432-201ENSMUST00000119540 186 ntBASIC0.58□□□□□ -2.32
Ccdc28aQ8CEI3 Gm25805-201ENSMUST00000122788 108 ntBASIC0.58□□□□□ -2.32
Ccdc28aQ8CEI3 Gm25434-201ENSMUST00000158278 167 ntBASIC0.58□□□□□ -2.32
Ccdc28aQ8CEI3 Gm24277-201ENSMUST00000158661 104 ntBASIC0.58□□□□□ -2.32
Ccdc28aQ8CEI3 Gm26236-201ENSMUST00000175536 137 ntBASIC0.58□□□□□ -2.32
Ccdc28aQ8CEI3 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC0.58□□□□□ -2.32
Ccdc28aQ8CEI3 Mir7014-201ENSMUST00000183853 63 ntBASIC0.58□□□□□ -2.32
Ccdc28aQ8CEI3 Gm20257-202ENSMUST00000188643 130 ntBASIC0.58□□□□□ -2.32
Ccdc28aQ8CEI3 AL928567.1-201ENSMUST00000197891 138 ntBASIC0.58□□□□□ -2.32
Ccdc28aQ8CEI3 Gm43220-201ENSMUST00000199299 282 ntBASIC0.58□□□□□ -2.32
Ccdc28aQ8CEI3 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC0.58□□□□□ -2.32
Ccdc28aQ8CEI3 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC0.58□□□□□ -2.32
Ccdc28aQ8CEI3 Gm33654-201ENSMUST00000221704 215 ntBASIC0.58□□□□□ -2.32
Ccdc28aQ8CEI3 AC098718.1-201ENSMUST00000226166 175 ntBASIC0.58□□□□□ -2.32
Ccdc28aQ8CEI3 Gm24152-201ENSMUST00000082764 163 ntBASIC0.58□□□□□ -2.32
Ccdc28aQ8CEI3 Gm43877-201ENSMUST00000205029 2238 ntBASIC0.58□□□□□ -2.32
Ccdc28aQ8CEI3 Gm22545-201ENSMUST00000104350 132 ntBASIC0.57□□□□□ -2.32
Ccdc28aQ8CEI3 Gm25884-201ENSMUST00000157782 62 ntBASIC0.57□□□□□ -2.32
Ccdc28aQ8CEI3 Gm24393-201ENSMUST00000158135 97 ntBASIC0.57□□□□□ -2.32
Ccdc28aQ8CEI3 Gm22113-201ENSMUST00000158343 104 ntBASIC0.57□□□□□ -2.32
Ccdc28aQ8CEI3 Gm20462-201ENSMUST00000172623 408 ntBASIC0.57□□□□□ -2.32
Ccdc28aQ8CEI3 Gm27236-201ENSMUST00000184147 442 ntBASIC0.57□□□□□ -2.32
Ccdc28aQ8CEI3 Gm29490-201ENSMUST00000190923 342 ntBASIC0.57□□□□□ -2.32
Ccdc28aQ8CEI3 Gm44325-201ENSMUST00000196757 77 ntBASIC0.57□□□□□ -2.32
Ccdc28aQ8CEI3 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC0.57□□□□□ -2.32
Ccdc28aQ8CEI3 Gm45704-201ENSMUST00000212582 403 ntBASIC0.57□□□□□ -2.32
Ccdc28aQ8CEI3 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC0.57□□□□□ -2.32
Ccdc28aQ8CEI3 AC164161.1-201ENSMUST00000214076 639 ntBASIC0.57□□□□□ -2.32
Ccdc28aQ8CEI3 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
Ccdc28aQ8CEI3 Gm24966-201ENSMUST00000082443 79 ntBASIC0.57□□□□□ -2.32
Ccdc28aQ8CEI3 Mir155-201ENSMUST00000083463 65 ntBASIC0.57□□□□□ -2.32
Ccdc28aQ8CEI3 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
Ccdc28aQ8CEI3 Gm10033-201ENSMUST00000072427 1813 ntBASIC0.57□□□□□ -2.32
Ccdc28aQ8CEI3 Gm15102-201ENSMUST00000118740 1502 ntBASIC0.56□□□□□ -2.32
Ccdc28aQ8CEI3 Gm15101-201ENSMUST00000178818 1502 ntBASIC0.56□□□□□ -2.32
Ccdc28aQ8CEI3 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
Ccdc28aQ8CEI3 Gm11859-201ENSMUST00000118099 455 ntBASIC0.56□□□□□ -2.32
Ccdc28aQ8CEI3 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC0.56□□□□□ -2.32
Ccdc28aQ8CEI3 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.56□□□□□ -2.32
Ccdc28aQ8CEI3 Mir8090-201ENSMUST00000185078 136 ntBASIC0.56□□□□□ -2.32
Ccdc28aQ8CEI3 Gm45119-201ENSMUST00000207612 199 ntBASIC0.56□□□□□ -2.32
Ccdc28aQ8CEI3 Gm23627-201ENSMUST00000082459 107 ntBASIC0.56□□□□□ -2.32
Ccdc28aQ8CEI3 Gm22502-201ENSMUST00000082488 107 ntBASIC0.56□□□□□ -2.32
Ccdc28aQ8CEI3 Gm22977-201ENSMUST00000082615 107 ntBASIC0.56□□□□□ -2.32
Ccdc28aQ8CEI3 Gm24624-201ENSMUST00000082617 164 ntBASIC0.56□□□□□ -2.32
Ccdc28aQ8CEI3 Gm22302-201ENSMUST00000082657 106 ntBASIC0.56□□□□□ -2.32
Ccdc28aQ8CEI3 Gm24149-201ENSMUST00000082757 107 ntBASIC0.56□□□□□ -2.32
Ccdc28aQ8CEI3 Gm26082-201ENSMUST00000104070 127 ntBASIC0.55□□□□□ -2.32
Ccdc28aQ8CEI3 Gm12225-201ENSMUST00000117995 298 ntBASIC0.55□□□□□ -2.32
Ccdc28aQ8CEI3 Gm11522-201ENSMUST00000120533 176 ntBASIC0.55□□□□□ -2.32
Ccdc28aQ8CEI3 Gm11334-201ENSMUST00000121969 156 ntBASIC0.55□□□□□ -2.32
Ccdc28aQ8CEI3 Gm24385-201ENSMUST00000122694 350 ntBASIC0.55□□□□□ -2.32
Ccdc28aQ8CEI3 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC0.55□□□□□ -2.32
Ccdc28aQ8CEI3 Gm22228-201ENSMUST00000157364 101 ntBASIC0.55□□□□□ -2.32
Ccdc28aQ8CEI3 Gm25909-201ENSMUST00000157619 121 ntBASIC0.55□□□□□ -2.32
Ccdc28aQ8CEI3 Gm24853-201ENSMUST00000158026 121 ntBASIC0.55□□□□□ -2.32
Ccdc28aQ8CEI3 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC0.55□□□□□ -2.32
Ccdc28aQ8CEI3 Gm18291-201ENSMUST00000190791 301 ntBASIC0.55□□□□□ -2.32
Ccdc28aQ8CEI3 Gm44358-201ENSMUST00000196301 98 ntBASIC0.55□□□□□ -2.32
Ccdc28aQ8CEI3 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC0.55□□□□□ -2.32
Ccdc28aQ8CEI3 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC0.55□□□□□ -2.32
Ccdc28aQ8CEI3 AC126554.1-201ENSMUST00000222161 271 ntBASIC0.55□□□□□ -2.32
Ccdc28aQ8CEI3 AC154636.2-201ENSMUST00000222538 161 ntBASIC0.55□□□□□ -2.32
Ccdc28aQ8CEI3 Gm24037-201ENSMUST00000082871 180 ntBASIC0.55□□□□□ -2.32
Ccdc28aQ8CEI3 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC0.55□□□□□ -2.32
Ccdc28aQ8CEI3 Mir362-201ENSMUST00000093592 65 ntBASIC0.55□□□□□ -2.32
Ccdc28aQ8CEI3 Gm12433-201ENSMUST00000119659 255 ntBASIC0.54□□□□□ -2.32
Ccdc28aQ8CEI3 Gm22199-201ENSMUST00000122660 126 ntBASIC0.54□□□□□ -2.32
Ccdc28aQ8CEI3 Gm16358-201ENSMUST00000146046 210 ntBASIC0.54□□□□□ -2.32
Ccdc28aQ8CEI3 Gm22447-201ENSMUST00000158155 92 ntBASIC0.54□□□□□ -2.32
Ccdc28aQ8CEI3 Gm26004-201ENSMUST00000158804 116 ntBASIC0.54□□□□□ -2.32
Ccdc28aQ8CEI3 Gm23660-201ENSMUST00000178362 79 ntBASIC0.54□□□□□ -2.32
Ccdc28aQ8CEI3 Gm24088-201ENSMUST00000179100 79 ntBASIC0.54□□□□□ -2.32
Ccdc28aQ8CEI3 Gm23191-201ENSMUST00000179147 107 ntBASIC0.54□□□□□ -2.32
Ccdc28aQ8CEI3 Gm25284-201ENSMUST00000180345 141 ntBASIC0.54□□□□□ -2.32
Ccdc28aQ8CEI3 Mir7052-201ENSMUST00000184821 65 ntBASIC0.54□□□□□ -2.32
Ccdc28aQ8CEI3 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC0.54□□□□□ -2.32
Ccdc28aQ8CEI3 Gm28661-201ENSMUST00000188231 681 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms