Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm24174-201ENSMUST00000158933 111 ntBASIC1.87□□□□□ -2.11
Nup88Q8CEC0 Gm16162-201ENSMUST00000162296 297 ntBASIC1.87□□□□□ -2.11
Nup88Q8CEC0 Gm24510-201ENSMUST00000174965 94 ntBASIC1.87□□□□□ -2.11
Nup88Q8CEC0 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC1.87□□□□□ -2.11
Nup88Q8CEC0 Gm27511-201ENSMUST00000183502 127 ntBASIC1.87□□□□□ -2.11
Nup88Q8CEC0 Gm9251-201ENSMUST00000197202 628 ntBASIC1.87□□□□□ -2.11
Nup88Q8CEC0 Mir376a-201ENSMUST00000197584 68 ntBASIC1.87□□□□□ -2.11
Nup88Q8CEC0 Mir7227-201ENSMUST00000200408 59 ntBASIC1.87□□□□□ -2.11
Nup88Q8CEC0 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC1.87□□□□□ -2.11
Nup88Q8CEC0 AC145736.2-201ENSMUST00000216305 365 ntBASIC1.87□□□□□ -2.11
Nup88Q8CEC0 AC163033.1-201ENSMUST00000218608 157 ntBASIC1.87□□□□□ -2.11
Nup88Q8CEC0 Gm26447-201ENSMUST00000082448 129 ntBASIC1.87□□□□□ -2.11
Nup88Q8CEC0 Gm24151-201ENSMUST00000082758 141 ntBASIC1.87□□□□□ -2.11
Nup88Q8CEC0 Gm10360-201ENSMUST00000097219 272 ntBASIC1.87□□□□□ -2.11
Nup88Q8CEC0 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Nup88Q8CEC0 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Nup88Q8CEC0 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Nup88Q8CEC0 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Nup88Q8CEC0 Mir293-201ENSMUST00000104841 80 ntBASIC1.86□□□□□ -2.11
Nup88Q8CEC0 Gm26181-201ENSMUST00000157687 106 ntBASIC1.86□□□□□ -2.11
Nup88Q8CEC0 Gm22315-201ENSMUST00000158010 143 ntBASIC1.86□□□□□ -2.11
Nup88Q8CEC0 Gm22665-201ENSMUST00000158720 275 ntBASIC1.86□□□□□ -2.11
Nup88Q8CEC0 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC1.86□□□□□ -2.11
Nup88Q8CEC0 Gm7958-201ENSMUST00000178255 468 ntBASIC1.86□□□□□ -2.11
Nup88Q8CEC0 Gm7950-201ENSMUST00000179633 468 ntBASIC1.86□□□□□ -2.11
Nup88Q8CEC0 Mir6419-201ENSMUST00000184784 113 ntBASIC1.86□□□□□ -2.11
Nup88Q8CEC0 Gm28383-201ENSMUST00000187563 139 ntBASIC1.86□□□□□ -2.11
Nup88Q8CEC0 Gm29262-201ENSMUST00000190084 196 ntBASIC1.86□□□□□ -2.11
Nup88Q8CEC0 Gm45907-201ENSMUST00000213023 193 ntBASIC1.86□□□□□ -2.11
Nup88Q8CEC0 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC1.86□□□□□ -2.11
Nup88Q8CEC0 Snora3-201ENSMUST00000083082 132 ntBASIC1.86□□□□□ -2.11
Nup88Q8CEC0 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
Nup88Q8CEC0 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.86□□□□□ -2.11
Nup88Q8CEC0 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Nup88Q8CEC0 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Nup88Q8CEC0 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Nup88Q8CEC0 Mir669i-201ENSMUST00000117007 127 ntBASIC1.85□□□□□ -2.11
Nup88Q8CEC0 Gm15861-201ENSMUST00000120979 339 ntBASIC1.85□□□□□ -2.11
Nup88Q8CEC0 Gm13725-201ENSMUST00000122139 207 ntBASIC1.85□□□□□ -2.11
Nup88Q8CEC0 Gm22216-201ENSMUST00000157557 114 ntBASIC1.85□□□□□ -2.11
Nup88Q8CEC0 Gm22603-201ENSMUST00000157603 96 ntBASIC1.85□□□□□ -2.11
Nup88Q8CEC0 Gm25333-201ENSMUST00000158035 246 ntBASIC1.85□□□□□ -2.11
Nup88Q8CEC0 Mir3057-201ENSMUST00000175040 91 ntBASIC1.85□□□□□ -2.11
Nup88Q8CEC0 Gm22242-201ENSMUST00000175224 118 ntBASIC1.85□□□□□ -2.11
Nup88Q8CEC0 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Nup88Q8CEC0 AC125167.1-201ENSMUST00000198698 141 ntBASIC1.85□□□□□ -2.11
Nup88Q8CEC0 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.85□□□□□ -2.11
Nup88Q8CEC0 AC154245.1-201ENSMUST00000224615 601 ntBASIC1.85□□□□□ -2.11
Nup88Q8CEC0 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Nup88Q8CEC0 Gm24406-201ENSMUST00000083026 128 ntBASIC1.85□□□□□ -2.11
Nup88Q8CEC0 Gm24764-201ENSMUST00000083686 199 ntBASIC1.85□□□□□ -2.11
Nup88Q8CEC0 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
Nup88Q8CEC0 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.84□□□□□ -2.11
Nup88Q8CEC0 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Nup88Q8CEC0 Gm13714-201ENSMUST00000117313 221 ntBASIC1.84□□□□□ -2.11
Nup88Q8CEC0 Gm13967-201ENSMUST00000120404 380 ntBASIC1.84□□□□□ -2.11
Nup88Q8CEC0 Gm11606-201ENSMUST00000120706 617 ntBASIC1.84□□□□□ -2.11
Nup88Q8CEC0 Gm23656-201ENSMUST00000122626 112 ntBASIC1.84□□□□□ -2.11
Nup88Q8CEC0 Gm23370-201ENSMUST00000199545 130 ntBASIC1.84□□□□□ -2.11
Nup88Q8CEC0 Gm23055-201ENSMUST00000082805 94 ntBASIC1.84□□□□□ -2.11
Nup88Q8CEC0 Mir320-201ENSMUST00000083594 82 ntBASIC1.84□□□□□ -2.11
Nup88Q8CEC0 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
Nup88Q8CEC0 Gm24902-201ENSMUST00000158126 123 ntBASIC1.83□□□□□ -2.12
Nup88Q8CEC0 Gm28453-203ENSMUST00000187041 189 ntBASIC1.83□□□□□ -2.12
Nup88Q8CEC0 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.83□□□□□ -2.12
Nup88Q8CEC0 Gm37801-201ENSMUST00000194754 274 ntBASIC1.83□□□□□ -2.12
Nup88Q8CEC0 Gm42594-201ENSMUST00000199511 246 ntBASIC1.83□□□□□ -2.12
Nup88Q8CEC0 AC116460.1-201ENSMUST00000219040 313 ntBASIC1.83□□□□□ -2.12
Nup88Q8CEC0 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.83□□□□□ -2.12
Nup88Q8CEC0 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.83□□□□□ -2.12
Nup88Q8CEC0 Gm23345-201ENSMUST00000083817 150 ntBASIC1.83□□□□□ -2.12
Nup88Q8CEC0 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Nup88Q8CEC0 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.82□□□□□ -2.12
Nup88Q8CEC0 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Nup88Q8CEC0 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Nup88Q8CEC0 Gm14937-201ENSMUST00000119709 208 ntBASIC1.82□□□□□ -2.12
Nup88Q8CEC0 Gm6025-201ENSMUST00000121517 201 ntBASIC1.82□□□□□ -2.12
Nup88Q8CEC0 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.82□□□□□ -2.12
Nup88Q8CEC0 Gm22883-201ENSMUST00000157376 106 ntBASIC1.82□□□□□ -2.12
Nup88Q8CEC0 Gm19777-201ENSMUST00000191940 358 ntBASIC1.82□□□□□ -2.12
Nup88Q8CEC0 Gm29818-201ENSMUST00000218070 165 ntBASIC1.82□□□□□ -2.12
Nup88Q8CEC0 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.82□□□□□ -2.12
Nup88Q8CEC0 AC163295.1-201ENSMUST00000227840 314 ntBASIC1.82□□□□□ -2.12
Nup88Q8CEC0 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
Nup88Q8CEC0 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.81□□□□□ -2.12
Nup88Q8CEC0 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Nup88Q8CEC0 Gm27723-201ENSMUST00000157398 63 ntBASIC1.81□□□□□ -2.12
Nup88Q8CEC0 Gm23714-201ENSMUST00000179259 105 ntBASIC1.81□□□□□ -2.12
Nup88Q8CEC0 Mir7683-201ENSMUST00000183842 61 ntBASIC1.81□□□□□ -2.12
Nup88Q8CEC0 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.81□□□□□ -2.12
Nup88Q8CEC0 Mir221-201ENSMUST00000083488 95 ntBASIC1.81□□□□□ -2.12
Nup88Q8CEC0 Mir181a-2-201ENSMUST00000083489 76 ntBASIC1.81□□□□□ -2.12
Nup88Q8CEC0 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.81□□□□□ -2.12
Nup88Q8CEC0 Gm23060-201ENSMUST00000102345 109 ntBASIC1.8□□□□□ -2.12
Nup88Q8CEC0 Gm15213-201ENSMUST00000122098 216 ntBASIC1.8□□□□□ -2.12
Nup88Q8CEC0 Gm25831-201ENSMUST00000158924 163 ntBASIC1.8□□□□□ -2.12
Nup88Q8CEC0 Gm28849-201ENSMUST00000188127 174 ntBASIC1.8□□□□□ -2.12
Nup88Q8CEC0 Gm28330-201ENSMUST00000190353 171 ntBASIC1.8□□□□□ -2.12
Nup88Q8CEC0 Gm37693-201ENSMUST00000194562 234 ntBASIC1.8□□□□□ -2.12
Nup88Q8CEC0 Gm38060-201ENSMUST00000194822 464 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 149.4 ms