Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 AC147101.1-201ENSMUST00000217964 312 ntBASIC0.53□□□□□ -2.32
Trub1Q8C0D0 AC163033.1-201ENSMUST00000218608 157 ntBASIC0.53□□□□□ -2.32
Trub1Q8C0D0 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
Trub1Q8C0D0 Gm24311-201ENSMUST00000082570 104 ntBASIC0.53□□□□□ -2.32
Trub1Q8C0D0 Gm22884-201ENSMUST00000083127 140 ntBASIC0.53□□□□□ -2.32
Trub1Q8C0D0 Mir33-201ENSMUST00000083531 69 ntBASIC0.53□□□□□ -2.32
Trub1Q8C0D0 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
Trub1Q8C0D0 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC0.52□□□□□ -2.33
Trub1Q8C0D0 Gm11407-201ENSMUST00000120362 1058 ntBASIC0.52□□□□□ -2.33
Trub1Q8C0D0 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC0.52□□□□□ -2.33
Trub1Q8C0D0 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC0.52□□□□□ -2.33
Trub1Q8C0D0 Gm27926-201ENSMUST00000157180 66 ntBASIC0.52□□□□□ -2.33
Trub1Q8C0D0 Gm23542-201ENSMUST00000158208 96 ntBASIC0.52□□□□□ -2.33
Trub1Q8C0D0 Gm25750-201ENSMUST00000175483 112 ntBASIC0.52□□□□□ -2.33
Trub1Q8C0D0 Gm22802-201ENSMUST00000175621 89 ntBASIC0.52□□□□□ -2.33
Trub1Q8C0D0 Gm43220-201ENSMUST00000199299 282 ntBASIC0.52□□□□□ -2.33
Trub1Q8C0D0 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.52□□□□□ -2.33
Trub1Q8C0D0 AC192616.1-201ENSMUST00000221922 132 ntBASIC0.52□□□□□ -2.33
Trub1Q8C0D0 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
Trub1Q8C0D0 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC0.52□□□□□ -2.33
Trub1Q8C0D0 AC164297.1-201ENSMUST00000224484 1561 ntBASIC0.52□□□□□ -2.33
Trub1Q8C0D0 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.51□□□□□ -2.33
Trub1Q8C0D0 Gm26500-201ENSMUST00000101867 106 ntBASIC0.51□□□□□ -2.33
Trub1Q8C0D0 Gm22163-201ENSMUST00000158408 135 ntBASIC0.51□□□□□ -2.33
Trub1Q8C0D0 Gm24277-201ENSMUST00000158661 104 ntBASIC0.51□□□□□ -2.33
Trub1Q8C0D0 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.51□□□□□ -2.33
Trub1Q8C0D0 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC0.51□□□□□ -2.33
Trub1Q8C0D0 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC0.51□□□□□ -2.33
Trub1Q8C0D0 AC132918.1-201ENSMUST00000227877 925 ntBASIC0.51□□□□□ -2.33
Trub1Q8C0D0 Gm23055-201ENSMUST00000082805 94 ntBASIC0.51□□□□□ -2.33
Trub1Q8C0D0 Gm25789-201ENSMUST00000083294 76 ntBASIC0.51□□□□□ -2.33
Trub1Q8C0D0 Gm24271-201ENSMUST00000102327 111 ntBASIC0.5□□□□□ -2.33
Trub1Q8C0D0 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
Trub1Q8C0D0 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
Trub1Q8C0D0 AC155712.1-201ENSMUST00000219704 160 ntBASIC0.5□□□□□ -2.33
Trub1Q8C0D0 AC154636.2-201ENSMUST00000222538 161 ntBASIC0.5□□□□□ -2.33
Trub1Q8C0D0 AC144733.1-201ENSMUST00000222893 1289 ntBASIC0.5□□□□□ -2.33
Trub1Q8C0D0 Gm24356-201ENSMUST00000082859 106 ntBASIC0.5□□□□□ -2.33
Trub1Q8C0D0 Gm24920-201ENSMUST00000083018 85 ntBASIC0.5□□□□□ -2.33
Trub1Q8C0D0 Mir133a-1-201ENSMUST00000083465 68 ntBASIC0.5□□□□□ -2.33
Trub1Q8C0D0 Mir448-201ENSMUST00000083516 112 ntBASIC0.5□□□□□ -2.33
Trub1Q8C0D0 Gm23041-201ENSMUST00000083868 106 ntBASIC0.5□□□□□ -2.33
Trub1Q8C0D0 Gm26108-201ENSMUST00000083973 191 ntBASIC0.5□□□□□ -2.33
Trub1Q8C0D0 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
Trub1Q8C0D0 Gm22771-201ENSMUST00000104449 91 ntBASIC0.49□□□□□ -2.33
Trub1Q8C0D0 n-R5s207-201ENSMUST00000122497 118 ntBASIC0.49□□□□□ -2.33
Trub1Q8C0D0 Gm22482-201ENSMUST00000122563 359 ntBASIC0.49□□□□□ -2.33
Trub1Q8C0D0 Gm23605-201ENSMUST00000157255 127 ntBASIC0.49□□□□□ -2.33
Trub1Q8C0D0 Gm17148-201ENSMUST00000164702 249 ntBASIC0.49□□□□□ -2.33
Trub1Q8C0D0 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC0.49□□□□□ -2.33
Trub1Q8C0D0 Gm24799-201ENSMUST00000178431 79 ntBASIC0.49□□□□□ -2.33
Trub1Q8C0D0 Gm28343-201ENSMUST00000185386 112 ntBASIC0.49□□□□□ -2.33
Trub1Q8C0D0 Gm29490-201ENSMUST00000190923 342 ntBASIC0.49□□□□□ -2.33
Trub1Q8C0D0 Gm43432-201ENSMUST00000196352 121 ntBASIC0.49□□□□□ -2.33
Trub1Q8C0D0 Gm24152-201ENSMUST00000082764 163 ntBASIC0.49□□□□□ -2.33
Trub1Q8C0D0 Mir362-201ENSMUST00000093592 65 ntBASIC0.49□□□□□ -2.33
Trub1Q8C0D0 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.49□□□□□ -2.33
Trub1Q8C0D0 Gm15102-201ENSMUST00000118740 1502 ntBASIC0.48□□□□□ -2.33
Trub1Q8C0D0 Gm15101-201ENSMUST00000178818 1502 ntBASIC0.48□□□□□ -2.33
Trub1Q8C0D0 Gm23130-201ENSMUST00000104252 74 ntBASIC0.48□□□□□ -2.33
Trub1Q8C0D0 Gm11410-201ENSMUST00000120053 1143 ntBASIC0.48□□□□□ -2.33
Trub1Q8C0D0 Gm24385-201ENSMUST00000122694 350 ntBASIC0.48□□□□□ -2.33
Trub1Q8C0D0 n-R5s63-201ENSMUST00000122756 103 ntBASIC0.48□□□□□ -2.33
Trub1Q8C0D0 Gm16358-201ENSMUST00000146046 210 ntBASIC0.48□□□□□ -2.33
Trub1Q8C0D0 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
Trub1Q8C0D0 Gm24438-201ENSMUST00000157893 115 ntBASIC0.48□□□□□ -2.33
Trub1Q8C0D0 Gm25976-201ENSMUST00000158695 130 ntBASIC0.48□□□□□ -2.33
Trub1Q8C0D0 Gm25166-201ENSMUST00000158909 111 ntBASIC0.48□□□□□ -2.33
Trub1Q8C0D0 Gm22565-201ENSMUST00000175540 69 ntBASIC0.48□□□□□ -2.33
Trub1Q8C0D0 Gm26430-201ENSMUST00000178054 107 ntBASIC0.48□□□□□ -2.33
Trub1Q8C0D0 Gm26335-201ENSMUST00000178449 107 ntBASIC0.48□□□□□ -2.33
Trub1Q8C0D0 Gm44010-201ENSMUST00000204432 331 ntBASIC0.48□□□□□ -2.33
Trub1Q8C0D0 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC0.48□□□□□ -2.33
Trub1Q8C0D0 AC153541.1-201ENSMUST00000213786 294 ntBASIC0.48□□□□□ -2.33
Trub1Q8C0D0 Gm18113-201ENSMUST00000220630 303 ntBASIC0.48□□□□□ -2.33
Trub1Q8C0D0 CT009713.9-201ENSMUST00000223604 389 ntBASIC0.48□□□□□ -2.33
Trub1Q8C0D0 Gm22673-201ENSMUST00000104415 131 ntBASIC0.47□□□□□ -2.33
Trub1Q8C0D0 Gm14296-202ENSMUST00000108931 750 ntBASIC0.47□□□□□ -2.33
Trub1Q8C0D0 Gm12433-201ENSMUST00000119659 255 ntBASIC0.47□□□□□ -2.33
Trub1Q8C0D0 Gm14980-201ENSMUST00000121247 736 ntBASIC0.47□□□□□ -2.33
Trub1Q8C0D0 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC0.47□□□□□ -2.33
Trub1Q8C0D0 Gm18185-201ENSMUST00000186725 667 ntBASIC0.47□□□□□ -2.33
Trub1Q8C0D0 Gm29229-201ENSMUST00000188874 323 ntBASIC0.47□□□□□ -2.33
Trub1Q8C0D0 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.47□□□□□ -2.33
Trub1Q8C0D0 Mir490-201ENSMUST00000093567 84 ntBASIC0.47□□□□□ -2.33
Trub1Q8C0D0 Gm22003-201ENSMUST00000101885 107 ntBASIC0.46□□□□□ -2.34
Trub1Q8C0D0 Gm14782-201ENSMUST00000120151 195 ntBASIC0.46□□□□□ -2.34
Trub1Q8C0D0 Gm14287-201ENSMUST00000121060 117 ntBASIC0.46□□□□□ -2.34
Trub1Q8C0D0 Gm25805-201ENSMUST00000122788 108 ntBASIC0.46□□□□□ -2.34
Trub1Q8C0D0 Gm23410-201ENSMUST00000179967 107 ntBASIC0.46□□□□□ -2.34
Trub1Q8C0D0 Gm22756-201ENSMUST00000180118 107 ntBASIC0.46□□□□□ -2.34
Trub1Q8C0D0 Mir6346-201ENSMUST00000183982 81 ntBASIC0.46□□□□□ -2.34
Trub1Q8C0D0 Gm28921-201ENSMUST00000190219 378 ntBASIC0.46□□□□□ -2.34
Trub1Q8C0D0 Gm44726-201ENSMUST00000203427 217 ntBASIC0.46□□□□□ -2.34
Trub1Q8C0D0 Gm44921-201ENSMUST00000205290 301 ntBASIC0.46□□□□□ -2.34
Trub1Q8C0D0 AC117202.2-201ENSMUST00000226491 1101 ntBASIC0.46□□□□□ -2.34
Trub1Q8C0D0 Gm22505-201ENSMUST00000082956 108 ntBASIC0.46□□□□□ -2.34
Trub1Q8C0D0 Gm22704-201ENSMUST00000083027 137 ntBASIC0.46□□□□□ -2.34
Trub1Q8C0D0 Gm22363-201ENSMUST00000083100 108 ntBASIC0.46□□□□□ -2.34
Trub1Q8C0D0 Gm23814-201ENSMUST00000083230 102 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 202 ms