Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm6952-201ENSMUST00000118629 159 ntBASIC3.4□□□□□ -1.87
Usp40Q8BWR4 Gm22957-201ENSMUST00000122511 123 ntBASIC3.4□□□□□ -1.87
Usp40Q8BWR4 Gm24894-201ENSMUST00000122744 118 ntBASIC3.4□□□□□ -1.87
Usp40Q8BWR4 Gm24212-201ENSMUST00000158258 132 ntBASIC3.4□□□□□ -1.87
Usp40Q8BWR4 Gm17161-201ENSMUST00000169187 524 ntBASIC3.4□□□□□ -1.87
Usp40Q8BWR4 Mir6399-201ENSMUST00000184050 84 ntBASIC3.4□□□□□ -1.87
Usp40Q8BWR4 Gm19257-201ENSMUST00000186121 183 ntBASIC3.4□□□□□ -1.87
Usp40Q8BWR4 Gm18546-201ENSMUST00000197245 676 ntBASIC3.4□□□□□ -1.87
Usp40Q8BWR4 AC154262.1-201ENSMUST00000225976 286 ntBASIC3.4□□□□□ -1.87
Usp40Q8BWR4 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
Usp40Q8BWR4 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC3.39□□□□□ -1.87
Usp40Q8BWR4 Gm23772-201ENSMUST00000104433 102 ntBASIC3.39□□□□□ -1.87
Usp40Q8BWR4 Gm7123-201ENSMUST00000117647 213 ntBASIC3.39□□□□□ -1.87
Usp40Q8BWR4 Gm23230-201ENSMUST00000157298 133 ntBASIC3.39□□□□□ -1.87
Usp40Q8BWR4 Gm22521-201ENSMUST00000158272 134 ntBASIC3.39□□□□□ -1.87
Usp40Q8BWR4 Gm3852-201ENSMUST00000182781 264 ntBASIC3.39□□□□□ -1.87
Usp40Q8BWR4 Gm42834-201ENSMUST00000196845 256 ntBASIC3.39□□□□□ -1.87
Usp40Q8BWR4 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC3.39□□□□□ -1.87
Usp40Q8BWR4 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Usp40Q8BWR4 Mir186-201ENSMUST00000083497 71 ntBASIC3.39□□□□□ -1.87
Usp40Q8BWR4 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Usp40Q8BWR4 AC159625.1-201ENSMUST00000220994 2625 ntBASIC3.39□□□□□ -1.87
Usp40Q8BWR4 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Usp40Q8BWR4 Gm42862-201ENSMUST00000197494 2621 ntBASIC3.38□□□□□ -1.87
Usp40Q8BWR4 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Usp40Q8BWR4 Gm24892-201ENSMUST00000122747 104 ntBASIC3.38□□□□□ -1.87
Usp40Q8BWR4 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.38□□□□□ -1.87
Usp40Q8BWR4 Gm25623-201ENSMUST00000157216 108 ntBASIC3.38□□□□□ -1.87
Usp40Q8BWR4 Gm24210-201ENSMUST00000158263 133 ntBASIC3.38□□□□□ -1.87
Usp40Q8BWR4 Gm28650-201ENSMUST00000188413 411 ntBASIC3.38□□□□□ -1.87
Usp40Q8BWR4 Mir6925-201ENSMUST00000197857 70 ntBASIC3.38□□□□□ -1.87
Usp40Q8BWR4 Gm44429-201ENSMUST00000203542 186 ntBASIC3.38□□□□□ -1.87
Usp40Q8BWR4 Gm43898-201ENSMUST00000204456 424 ntBASIC3.38□□□□□ -1.87
Usp40Q8BWR4 AF357341-201ENSMUST00000083088 75 ntBASIC3.38□□□□□ -1.87
Usp40Q8BWR4 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Usp40Q8BWR4 Gm44114-201ENSMUST00000203270 2727 ntBASIC3.37□□□□□ -1.87
Usp40Q8BWR4 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
Usp40Q8BWR4 Gm14400-201ENSMUST00000117234 2135 ntBASIC3.37□□□□□ -1.87
Usp40Q8BWR4 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Usp40Q8BWR4 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Usp40Q8BWR4 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
Usp40Q8BWR4 Gm26011-201ENSMUST00000104410 104 ntBASIC3.37□□□□□ -1.87
Usp40Q8BWR4 Snord89-201ENSMUST00000104516 110 ntBASIC3.37□□□□□ -1.87
Usp40Q8BWR4 Gm16171-201ENSMUST00000118004 324 ntBASIC3.37□□□□□ -1.87
Usp40Q8BWR4 Gm13862-201ENSMUST00000121220 197 ntBASIC3.37□□□□□ -1.87
Usp40Q8BWR4 Gm25107-201ENSMUST00000122472 129 ntBASIC3.37□□□□□ -1.87
Usp40Q8BWR4 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC3.37□□□□□ -1.87
Usp40Q8BWR4 Gm22227-201ENSMUST00000157356 259 ntBASIC3.37□□□□□ -1.87
Usp40Q8BWR4 Gm22586-201ENSMUST00000157507 122 ntBASIC3.37□□□□□ -1.87
Usp40Q8BWR4 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Usp40Q8BWR4 Gm27399-201ENSMUST00000184250 78 ntBASIC3.37□□□□□ -1.87
Usp40Q8BWR4 AC167669.4-201ENSMUST00000225967 140 ntBASIC3.37□□□□□ -1.87
Usp40Q8BWR4 Mir29b-2-201ENSMUST00000083478 81 ntBASIC3.37□□□□□ -1.87
Usp40Q8BWR4 Gm25006-201ENSMUST00000083813 107 ntBASIC3.37□□□□□ -1.87
Usp40Q8BWR4 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.37□□□□□ -1.87
Usp40Q8BWR4 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Usp40Q8BWR4 Gm22750-201ENSMUST00000102076 103 ntBASIC3.36□□□□□ -1.87
Usp40Q8BWR4 Gm12934-201ENSMUST00000119221 343 ntBASIC3.36□□□□□ -1.87
Usp40Q8BWR4 Gm24634-201ENSMUST00000158672 107 ntBASIC3.36□□□□□ -1.87
Usp40Q8BWR4 Gm22664-201ENSMUST00000158719 105 ntBASIC3.36□□□□□ -1.87
Usp40Q8BWR4 Gm29553-201ENSMUST00000189692 279 ntBASIC3.36□□□□□ -1.87
Usp40Q8BWR4 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC3.36□□□□□ -1.87
Usp40Q8BWR4 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.36□□□□□ -1.87
Usp40Q8BWR4 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC3.36□□□□□ -1.87
Usp40Q8BWR4 Gm10730-201ENSMUST00000194097 2723 ntBASIC3.36□□□□□ -1.87
Usp40Q8BWR4 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Usp40Q8BWR4 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
Usp40Q8BWR4 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC3.35□□□□□ -1.87
Usp40Q8BWR4 Gm23101-201ENSMUST00000157550 137 ntBASIC3.35□□□□□ -1.87
Usp40Q8BWR4 Gm22666-201ENSMUST00000158717 164 ntBASIC3.35□□□□□ -1.87
Usp40Q8BWR4 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Usp40Q8BWR4 Mir497-201ENSMUST00000200557 84 ntBASIC3.35□□□□□ -1.87
Usp40Q8BWR4 Igkv1-136-201ENSMUST00000200635 297 ntBASIC3.35□□□□□ -1.87
Usp40Q8BWR4 AC147101.2-201ENSMUST00000219756 184 ntBASIC3.35□□□□□ -1.87
Usp40Q8BWR4 Gm22248-201ENSMUST00000082482 150 ntBASIC3.35□□□□□ -1.87
Usp40Q8BWR4 Gm22683-201ENSMUST00000082854 137 ntBASIC3.35□□□□□ -1.87
Usp40Q8BWR4 Snord61-201ENSMUST00000083176 71 ntBASIC3.35□□□□□ -1.87
Usp40Q8BWR4 Gm25789-201ENSMUST00000083294 76 ntBASIC3.35□□□□□ -1.87
Usp40Q8BWR4 Gm22055-201ENSMUST00000083388 107 ntBASIC3.35□□□□□ -1.87
Usp40Q8BWR4 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Usp40Q8BWR4 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Usp40Q8BWR4 Gm25753-201ENSMUST00000116792 121 ntBASIC3.34□□□□□ -1.87
Usp40Q8BWR4 Gm11786-201ENSMUST00000120799 155 ntBASIC3.34□□□□□ -1.87
Usp40Q8BWR4 Gm6025-201ENSMUST00000121517 201 ntBASIC3.34□□□□□ -1.87
Usp40Q8BWR4 Gm22612-201ENSMUST00000158293 101 ntBASIC3.34□□□□□ -1.87
Usp40Q8BWR4 Gm24771-201ENSMUST00000158508 137 ntBASIC3.34□□□□□ -1.87
Usp40Q8BWR4 Gm24842-201ENSMUST00000158681 54 ntBASIC3.34□□□□□ -1.87
Usp40Q8BWR4 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC3.34□□□□□ -1.87
Usp40Q8BWR4 Gm44477-201ENSMUST00000199661 110 ntBASIC3.34□□□□□ -1.87
Usp40Q8BWR4 Gm25851-201ENSMUST00000082794 107 ntBASIC3.34□□□□□ -1.87
Usp40Q8BWR4 Gm22251-201ENSMUST00000083216 107 ntBASIC3.34□□□□□ -1.87
Usp40Q8BWR4 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC3.34□□□□□ -1.88
Usp40Q8BWR4 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Usp40Q8BWR4 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.34□□□□□ -1.88
Usp40Q8BWR4 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Usp40Q8BWR4 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Usp40Q8BWR4 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Usp40Q8BWR4 Gm15861-201ENSMUST00000120979 339 ntBASIC3.33□□□□□ -1.88
Usp40Q8BWR4 Gm13560-201ENSMUST00000121865 329 ntBASIC3.33□□□□□ -1.88
Usp40Q8BWR4 Gm23655-201ENSMUST00000122627 105 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 149 ms