Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.1□□□□□ -2.23
Ccdc40Q8BI79 Gm27545-201ENSMUST00000184755 202 ntBASIC1.1□□□□□ -2.23
Ccdc40Q8BI79 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
Ccdc40Q8BI79 Gm43602-201ENSMUST00000196772 300 ntBASIC1.1□□□□□ -2.23
Ccdc40Q8BI79 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC1.1□□□□□ -2.23
Ccdc40Q8BI79 Gm8125-201ENSMUST00000216602 738 ntBASIC1.1□□□□□ -2.23
Ccdc40Q8BI79 AC154636.2-201ENSMUST00000222538 161 ntBASIC1.1□□□□□ -2.23
Ccdc40Q8BI79 Gm23299-201ENSMUST00000082708 79 ntBASIC1.1□□□□□ -2.23
Ccdc40Q8BI79 Mir32-201ENSMUST00000083610 70 ntBASIC1.1□□□□□ -2.23
Ccdc40Q8BI79 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
Ccdc40Q8BI79 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
Ccdc40Q8BI79 Gm23142-201ENSMUST00000101848 105 ntBASIC1.09□□□□□ -2.23
Ccdc40Q8BI79 Gm26240-201ENSMUST00000101893 105 ntBASIC1.09□□□□□ -2.23
Ccdc40Q8BI79 Gm27419-201ENSMUST00000184576 109 ntBASIC1.09□□□□□ -2.23
Ccdc40Q8BI79 Gm23705-201ENSMUST00000104370 130 ntBASIC1.08□□□□□ -2.24
Ccdc40Q8BI79 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
Ccdc40Q8BI79 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC1.08□□□□□ -2.24
Ccdc40Q8BI79 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC1.08□□□□□ -2.24
Ccdc40Q8BI79 Gm37713-201ENSMUST00000191746 198 ntBASIC1.08□□□□□ -2.24
Ccdc40Q8BI79 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.08□□□□□ -2.24
Ccdc40Q8BI79 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC1.08□□□□□ -2.24
Ccdc40Q8BI79 AC162857.1-201ENSMUST00000226614 400 ntBASIC1.08□□□□□ -2.24
Ccdc40Q8BI79 Gm9795-201ENSMUST00000062156 693 ntBASIC1.08□□□□□ -2.24
Ccdc40Q8BI79 Gm24431-201ENSMUST00000104073 66 ntBASIC1.07□□□□□ -2.24
Ccdc40Q8BI79 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC1.07□□□□□ -2.24
Ccdc40Q8BI79 Gm25011-201ENSMUST00000158398 126 ntBASIC1.07□□□□□ -2.24
Ccdc40Q8BI79 Gm23636-201ENSMUST00000175070 95 ntBASIC1.07□□□□□ -2.24
Ccdc40Q8BI79 Gm27410-201ENSMUST00000183851 115 ntBASIC1.07□□□□□ -2.24
Ccdc40Q8BI79 Gm29022-201ENSMUST00000190702 225 ntBASIC1.07□□□□□ -2.24
Ccdc40Q8BI79 Gm38274-201ENSMUST00000195689 148 ntBASIC1.07□□□□□ -2.24
Ccdc40Q8BI79 Gm44387-201ENSMUST00000196298 145 ntBASIC1.07□□□□□ -2.24
Ccdc40Q8BI79 CT954323.1-201ENSMUST00000222774 229 ntBASIC1.07□□□□□ -2.24
Ccdc40Q8BI79 Gm23614-201ENSMUST00000082598 107 ntBASIC1.07□□□□□ -2.24
Ccdc40Q8BI79 Snord35a-201ENSMUST00000083884 90 ntBASIC1.07□□□□□ -2.24
Ccdc40Q8BI79 Mir669p-2-201ENSMUST00000103868 87 ntBASIC1.06□□□□□ -2.24
Ccdc40Q8BI79 Mir669p-1-201ENSMUST00000103884 87 ntBASIC1.06□□□□□ -2.24
Ccdc40Q8BI79 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
Ccdc40Q8BI79 Gm11798-201ENSMUST00000119150 421 ntBASIC1.06□□□□□ -2.24
Ccdc40Q8BI79 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC1.06□□□□□ -2.24
Ccdc40Q8BI79 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
Ccdc40Q8BI79 Gm27640-201ENSMUST00000184580 147 ntBASIC1.06□□□□□ -2.24
Ccdc40Q8BI79 Gm28344-201ENSMUST00000185704 279 ntBASIC1.06□□□□□ -2.24
Ccdc40Q8BI79 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC1.06□□□□□ -2.24
Ccdc40Q8BI79 AC157476.1-201ENSMUST00000215555 169 ntBASIC1.06□□□□□ -2.24
Ccdc40Q8BI79 CT025526.1-201ENSMUST00000217327 267 ntBASIC1.06□□□□□ -2.24
Ccdc40Q8BI79 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.06□□□□□ -2.24
Ccdc40Q8BI79 Gm25650-201ENSMUST00000083784 162 ntBASIC1.06□□□□□ -2.24
Ccdc40Q8BI79 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
Ccdc40Q8BI79 Gm22545-201ENSMUST00000104350 132 ntBASIC1.05□□□□□ -2.24
Ccdc40Q8BI79 Gm23921-201ENSMUST00000175258 107 ntBASIC1.05□□□□□ -2.24
Ccdc40Q8BI79 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
Ccdc40Q8BI79 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
Ccdc40Q8BI79 Mir6962-201ENSMUST00000199512 63 ntBASIC1.05□□□□□ -2.24
Ccdc40Q8BI79 Gm45543-201ENSMUST00000209327 88 ntBASIC1.05□□□□□ -2.24
Ccdc40Q8BI79 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.05□□□□□ -2.24
Ccdc40Q8BI79 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.05□□□□□ -2.24
Ccdc40Q8BI79 Mir22-201ENSMUST00000083595 95 ntBASIC1.05□□□□□ -2.24
Ccdc40Q8BI79 Gm11792-201ENSMUST00000120640 168 ntBASIC1.04□□□□□ -2.24
Ccdc40Q8BI79 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.04□□□□□ -2.24
Ccdc40Q8BI79 Gm23114-201ENSMUST00000158478 117 ntBASIC1.04□□□□□ -2.24
Ccdc40Q8BI79 Gm26914-201ENSMUST00000182262 223 ntBASIC1.04□□□□□ -2.24
Ccdc40Q8BI79 Mir6380-201ENSMUST00000184334 81 ntBASIC1.04□□□□□ -2.24
Ccdc40Q8BI79 Gm29014-201ENSMUST00000191422 326 ntBASIC1.04□□□□□ -2.24
Ccdc40Q8BI79 Gm43624-201ENSMUST00000197368 180 ntBASIC1.04□□□□□ -2.24
Ccdc40Q8BI79 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.04□□□□□ -2.24
Ccdc40Q8BI79 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.03□□□□□ -2.24
Ccdc40Q8BI79 Gm11334-201ENSMUST00000121969 156 ntBASIC1.03□□□□□ -2.24
Ccdc40Q8BI79 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.03□□□□□ -2.24
Ccdc40Q8BI79 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
Ccdc40Q8BI79 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC1.03□□□□□ -2.24
Ccdc40Q8BI79 Gm22802-201ENSMUST00000175621 89 ntBASIC1.03□□□□□ -2.24
Ccdc40Q8BI79 Gm28862-201ENSMUST00000188246 163 ntBASIC1.03□□□□□ -2.24
Ccdc40Q8BI79 Gm28288-201ENSMUST00000191019 214 ntBASIC1.03□□□□□ -2.24
Ccdc40Q8BI79 Gm42855-201ENSMUST00000197388 253 ntBASIC1.03□□□□□ -2.24
Ccdc40Q8BI79 Gm25851-201ENSMUST00000082794 107 ntBASIC1.03□□□□□ -2.24
Ccdc40Q8BI79 Gm24523-201ENSMUST00000083965 132 ntBASIC1.03□□□□□ -2.24
Ccdc40Q8BI79 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
Ccdc40Q8BI79 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
Ccdc40Q8BI79 Gm22515-201ENSMUST00000158273 305 ntBASIC1.02□□□□□ -2.25
Ccdc40Q8BI79 Gm24810-201ENSMUST00000175317 70 ntBASIC1.02□□□□□ -2.25
Ccdc40Q8BI79 Gm25750-201ENSMUST00000175483 112 ntBASIC1.02□□□□□ -2.25
Ccdc40Q8BI79 Gm27326-201ENSMUST00000183504 95 ntBASIC1.02□□□□□ -2.25
Ccdc40Q8BI79 Mir7665-201ENSMUST00000184907 63 ntBASIC1.02□□□□□ -2.25
Ccdc40Q8BI79 Gm37337-201ENSMUST00000192601 993 ntBASIC1.02□□□□□ -2.25
Ccdc40Q8BI79 Gm44358-201ENSMUST00000196301 98 ntBASIC1.02□□□□□ -2.25
Ccdc40Q8BI79 Gm44811-201ENSMUST00000209120 228 ntBASIC1.02□□□□□ -2.25
Ccdc40Q8BI79 AC163646.2-201ENSMUST00000227962 141 ntBASIC1.02□□□□□ -2.25
Ccdc40Q8BI79 Gm22884-201ENSMUST00000083127 140 ntBASIC1.02□□□□□ -2.25
Ccdc40Q8BI79 Gm43877-201ENSMUST00000205029 2238 ntBASIC1.01□□□□□ -2.25
Ccdc40Q8BI79 Mir7014-201ENSMUST00000183853 63 ntBASIC1.01□□□□□ -2.25
Ccdc40Q8BI79 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
Ccdc40Q8BI79 Gm44325-201ENSMUST00000196757 77 ntBASIC1.01□□□□□ -2.25
Ccdc40Q8BI79 Gm44473-201ENSMUST00000204039 152 ntBASIC1.01□□□□□ -2.25
Ccdc40Q8BI79 Gm26135-201ENSMUST00000101993 72 ntBASIC1□□□□□ -2.25
Ccdc40Q8BI79 Gm23967-201ENSMUST00000175062 78 ntBASIC1□□□□□ -2.25
Ccdc40Q8BI79 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC1□□□□□ -2.25
Ccdc40Q8BI79 Snord50b-201ENSMUST00000178497 72 ntBASIC1□□□□□ -2.25
Ccdc40Q8BI79 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC1□□□□□ -2.25
Ccdc40Q8BI79 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC1□□□□□ -2.25
Ccdc40Q8BI79 AC168062.3-201ENSMUST00000227025 165 ntBASIC1□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms