Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Gm25267-201ENSMUST00000158522 63 ntBASIC2.62□□□□□ -1.99
Pif1Q80SX8 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Pif1Q80SX8 Gm25994-201ENSMUST00000175392 101 ntBASIC2.62□□□□□ -1.99
Pif1Q80SX8 Gm25939-201ENSMUST00000179876 191 ntBASIC2.62□□□□□ -1.99
Pif1Q80SX8 Gm37693-201ENSMUST00000194562 234 ntBASIC2.62□□□□□ -1.99
Pif1Q80SX8 Gm43199-201ENSMUST00000200019 307 ntBASIC2.62□□□□□ -1.99
Pif1Q80SX8 Snord7-201ENSMUST00000083781 97 ntBASIC2.62□□□□□ -1.99
Pif1Q80SX8 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Pif1Q80SX8 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Pif1Q80SX8 Gm2869-201ENSMUST00000124359 2621 ntBASIC2.62□□□□□ -1.99
Pif1Q80SX8 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.61□□□□□ -1.99
Pif1Q80SX8 Gm25466-201ENSMUST00000103995 132 ntBASIC2.61□□□□□ -1.99
Pif1Q80SX8 Gm23128-201ENSMUST00000104257 132 ntBASIC2.61□□□□□ -1.99
Pif1Q80SX8 Gm14588-201ENSMUST00000119895 172 ntBASIC2.61□□□□□ -1.99
Pif1Q80SX8 Gm15214-201ENSMUST00000122155 470 ntBASIC2.61□□□□□ -1.99
Pif1Q80SX8 Gm23230-201ENSMUST00000157298 133 ntBASIC2.61□□□□□ -1.99
Pif1Q80SX8 Gm23325-201ENSMUST00000157422 129 ntBASIC2.61□□□□□ -1.99
Pif1Q80SX8 Gm25470-201ENSMUST00000175576 111 ntBASIC2.61□□□□□ -1.99
Pif1Q80SX8 Gm23963-201ENSMUST00000179603 77 ntBASIC2.61□□□□□ -1.99
Pif1Q80SX8 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC2.61□□□□□ -1.99
Pif1Q80SX8 Gm23128-202ENSMUST00000196578 133 ntBASIC2.61□□□□□ -1.99
Pif1Q80SX8 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.61□□□□□ -1.99
Pif1Q80SX8 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.61□□□□□ -1.99
Pif1Q80SX8 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Pif1Q80SX8 Gm25538-201ENSMUST00000101943 107 ntBASIC2.6□□□□□ -1.99
Pif1Q80SX8 Gm25500-201ENSMUST00000104426 123 ntBASIC2.6□□□□□ -1.99
Pif1Q80SX8 Gm26247-201ENSMUST00000116702 91 ntBASIC2.6□□□□□ -1.99
Pif1Q80SX8 Gm25316-201ENSMUST00000116826 118 ntBASIC2.6□□□□□ -1.99
Pif1Q80SX8 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC2.6□□□□□ -1.99
Pif1Q80SX8 Gm22500-201ENSMUST00000158982 99 ntBASIC2.6□□□□□ -1.99
Pif1Q80SX8 Gm20477-201ENSMUST00000174028 280 ntBASIC2.6□□□□□ -1.99
Pif1Q80SX8 Mir3076-201ENSMUST00000175415 60 ntBASIC2.6□□□□□ -1.99
Pif1Q80SX8 Trbv7-201ENSMUST00000193339 402 ntBASIC2.6□□□□□ -1.99
Pif1Q80SX8 Gm5010-201ENSMUST00000213131 260 ntBASIC2.6□□□□□ -1.99
Pif1Q80SX8 AC165293.1-201ENSMUST00000219669 329 ntBASIC2.6□□□□□ -1.99
Pif1Q80SX8 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.6□□□□□ -1.99
Pif1Q80SX8 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
Pif1Q80SX8 Gm26279-201ENSMUST00000157095 102 ntBASIC2.59□□□□□ -1.99
Pif1Q80SX8 Gm23043-201ENSMUST00000157890 109 ntBASIC2.59□□□□□ -1.99
Pif1Q80SX8 Gm25494-201ENSMUST00000158143 100 ntBASIC2.59□□□□□ -1.99
Pif1Q80SX8 Gm27722-201ENSMUST00000183908 76 ntBASIC2.59□□□□□ -1.99
Pif1Q80SX8 Mir7118-201ENSMUST00000197760 61 ntBASIC2.59□□□□□ -1.99
Pif1Q80SX8 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.59□□□□□ -1.99
Pif1Q80SX8 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.59□□□□□ -1.99
Pif1Q80SX8 Gm24038-201ENSMUST00000082872 159 ntBASIC2.59□□□□□ -1.99
Pif1Q80SX8 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Pif1Q80SX8 Gm16032-201ENSMUST00000118534 168 ntBASIC2.58□□□□□ -2
Pif1Q80SX8 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.58□□□□□ -2
Pif1Q80SX8 Gm24681-201ENSMUST00000158760 107 ntBASIC2.58□□□□□ -2
Pif1Q80SX8 Gm24668-201ENSMUST00000158935 104 ntBASIC2.58□□□□□ -2
Pif1Q80SX8 Gm23548-201ENSMUST00000158963 106 ntBASIC2.58□□□□□ -2
Pif1Q80SX8 Gm24816-201ENSMUST00000175311 151 ntBASIC2.58□□□□□ -2
Pif1Q80SX8 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Pif1Q80SX8 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
Pif1Q80SX8 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Pif1Q80SX8 Gm15281-201ENSMUST00000125181 351 ntBASIC2.57□□□□□ -2
Pif1Q80SX8 Gm23584-201ENSMUST00000157655 129 ntBASIC2.57□□□□□ -2
Pif1Q80SX8 Gm22416-201ENSMUST00000158590 88 ntBASIC2.57□□□□□ -2
Pif1Q80SX8 Gm22011-201ENSMUST00000158790 123 ntBASIC2.57□□□□□ -2
Pif1Q80SX8 Gm25119-201ENSMUST00000158815 88 ntBASIC2.57□□□□□ -2
Pif1Q80SX8 Gm27465-201ENSMUST00000184290 91 ntBASIC2.57□□□□□ -2
Pif1Q80SX8 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.57□□□□□ -2
Pif1Q80SX8 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC2.57□□□□□ -2
Pif1Q80SX8 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.57□□□□□ -2
Pif1Q80SX8 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Pif1Q80SX8 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Pif1Q80SX8 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.56□□□□□ -2
Pif1Q80SX8 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Pif1Q80SX8 Gm26154-201ENSMUST00000102339 96 ntBASIC2.56□□□□□ -2
Pif1Q80SX8 Gm15272-201ENSMUST00000120865 233 ntBASIC2.56□□□□□ -2
Pif1Q80SX8 Gm24922-201ENSMUST00000158511 102 ntBASIC2.56□□□□□ -2
Pif1Q80SX8 Gm23181-201ENSMUST00000158685 110 ntBASIC2.56□□□□□ -2
Pif1Q80SX8 Gm16111-201ENSMUST00000162128 285 ntBASIC2.56□□□□□ -2
Pif1Q80SX8 Gm20718-201ENSMUST00000176058 259 ntBASIC2.56□□□□□ -2
Pif1Q80SX8 Gm28912-201ENSMUST00000189001 234 ntBASIC2.56□□□□□ -2
Pif1Q80SX8 Gm43427-201ENSMUST00000198188 331 ntBASIC2.56□□□□□ -2
Pif1Q80SX8 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.56□□□□□ -2
Pif1Q80SX8 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC2.56□□□□□ -2
Pif1Q80SX8 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.56□□□□□ -2
Pif1Q80SX8 Mir146-201ENSMUST00000083667 65 ntBASIC2.56□□□□□ -2
Pif1Q80SX8 Mir471-201ENSMUST00000093596 67 ntBASIC2.56□□□□□ -2
Pif1Q80SX8 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
Pif1Q80SX8 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Pif1Q80SX8 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.55□□□□□ -2
Pif1Q80SX8 Mir499-201ENSMUST00000102357 79 ntBASIC2.55□□□□□ -2
Pif1Q80SX8 Gm24132-201ENSMUST00000104745 91 ntBASIC2.55□□□□□ -2
Pif1Q80SX8 Gm25707-201ENSMUST00000175120 96 ntBASIC2.55□□□□□ -2
Pif1Q80SX8 Mir7242-201ENSMUST00000183710 79 ntBASIC2.55□□□□□ -2
Pif1Q80SX8 Gm38183-201ENSMUST00000193189 205 ntBASIC2.55□□□□□ -2
Pif1Q80SX8 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC2.55□□□□□ -2
Pif1Q80SX8 Gm19855-201ENSMUST00000210145 249 ntBASIC2.55□□□□□ -2
Pif1Q80SX8 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC2.55□□□□□ -2
Pif1Q80SX8 Gm23461-201ENSMUST00000083265 107 ntBASIC2.55□□□□□ -2
Pif1Q80SX8 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Pif1Q80SX8 AC160984.1-201ENSMUST00000225855 3154 ntBASIC2.54□□□□□ -2
Pif1Q80SX8 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.54□□□□□ -2
Pif1Q80SX8 Snord89-201ENSMUST00000104516 110 ntBASIC2.54□□□□□ -2
Pif1Q80SX8 Gm14937-201ENSMUST00000119709 208 ntBASIC2.54□□□□□ -2
Pif1Q80SX8 DQ267100-201ENSMUST00000122600 72 ntBASIC2.54□□□□□ -2
Pif1Q80SX8 Gm22279-201ENSMUST00000157200 93 ntBASIC2.54□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 203.2 ms