Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm24536-201ENSMUST00000083144 107 ntBASIC2.21□□□□□ -2.06
Ubfd1Q78JW9 Gm24453-201ENSMUST00000083346 76 ntBASIC2.21□□□□□ -2.06
Ubfd1Q78JW9 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
Ubfd1Q78JW9 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Ubfd1Q78JW9 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Ubfd1Q78JW9 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Ubfd1Q78JW9 Gm15536-201ENSMUST00000121411 114 ntBASIC2.2□□□□□ -2.06
Ubfd1Q78JW9 Ear-ps4-201ENSMUST00000166834 450 ntBASIC2.2□□□□□ -2.06
Ubfd1Q78JW9 Gm24333-201ENSMUST00000175101 84 ntBASIC2.2□□□□□ -2.06
Ubfd1Q78JW9 Gm22621-201ENSMUST00000179678 74 ntBASIC2.2□□□□□ -2.06
Ubfd1Q78JW9 Gm9156-201ENSMUST00000189660 463 ntBASIC2.2□□□□□ -2.06
Ubfd1Q78JW9 Gm37715-201ENSMUST00000193206 235 ntBASIC2.2□□□□□ -2.06
Ubfd1Q78JW9 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.2□□□□□ -2.06
Ubfd1Q78JW9 Gm18617-201ENSMUST00000222311 259 ntBASIC2.2□□□□□ -2.06
Ubfd1Q78JW9 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.2□□□□□ -2.06
Ubfd1Q78JW9 Snord118-201ENSMUST00000082965 135 ntBASIC2.2□□□□□ -2.06
Ubfd1Q78JW9 Mir93-201ENSMUST00000083593 88 ntBASIC2.2□□□□□ -2.06
Ubfd1Q78JW9 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.2□□□□□ -2.06
Ubfd1Q78JW9 Gm24121-201ENSMUST00000102029 106 ntBASIC2.19□□□□□ -2.06
Ubfd1Q78JW9 Gm14652-201ENSMUST00000118479 235 ntBASIC2.19□□□□□ -2.06
Ubfd1Q78JW9 Gm12721-201ENSMUST00000120621 268 ntBASIC2.19□□□□□ -2.06
Ubfd1Q78JW9 Gm26026-201ENSMUST00000122726 123 ntBASIC2.19□□□□□ -2.06
Ubfd1Q78JW9 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Ubfd1Q78JW9 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Ubfd1Q78JW9 Gm25424-201ENSMUST00000157612 58 ntBASIC2.19□□□□□ -2.06
Ubfd1Q78JW9 Gm25371-201ENSMUST00000158162 101 ntBASIC2.19□□□□□ -2.06
Ubfd1Q78JW9 Gm22947-201ENSMUST00000158559 91 ntBASIC2.19□□□□□ -2.06
Ubfd1Q78JW9 Gm23182-201ENSMUST00000158688 135 ntBASIC2.19□□□□□ -2.06
Ubfd1Q78JW9 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Ubfd1Q78JW9 Gm25820-202ENSMUST00000197479 128 ntBASIC2.19□□□□□ -2.06
Ubfd1Q78JW9 Mir497-201ENSMUST00000200557 84 ntBASIC2.19□□□□□ -2.06
Ubfd1Q78JW9 CU062626.2-201ENSMUST00000223953 274 ntBASIC2.19□□□□□ -2.06
Ubfd1Q78JW9 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.19□□□□□ -2.06
Ubfd1Q78JW9 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.19□□□□□ -2.06
Ubfd1Q78JW9 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.18□□□□□ -2.06
Ubfd1Q78JW9 AC153964.2-201ENSMUST00000217704 2474 ntBASIC2.18□□□□□ -2.06
Ubfd1Q78JW9 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.18□□□□□ -2.06
Ubfd1Q78JW9 Gm24079-201ENSMUST00000104352 132 ntBASIC2.18□□□□□ -2.06
Ubfd1Q78JW9 Mir669d-201ENSMUST00000104644 121 ntBASIC2.18□□□□□ -2.06
Ubfd1Q78JW9 Trav20-201ENSMUST00000142754 347 ntBASIC2.18□□□□□ -2.06
Ubfd1Q78JW9 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.18□□□□□ -2.06
Ubfd1Q78JW9 Gm22099-201ENSMUST00000157925 123 ntBASIC2.18□□□□□ -2.06
Ubfd1Q78JW9 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Ubfd1Q78JW9 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC2.18□□□□□ -2.06
Ubfd1Q78JW9 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.18□□□□□ -2.06
Ubfd1Q78JW9 Gm34139-201ENSMUST00000196166 294 ntBASIC2.18□□□□□ -2.06
Ubfd1Q78JW9 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.18□□□□□ -2.06
Ubfd1Q78JW9 Gm25482-201ENSMUST00000083225 107 ntBASIC2.18□□□□□ -2.06
Ubfd1Q78JW9 Gm10360-201ENSMUST00000097219 272 ntBASIC2.18□□□□□ -2.06
Ubfd1Q78JW9 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
Ubfd1Q78JW9 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Ubfd1Q78JW9 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC2.17□□□□□ -2.06
Ubfd1Q78JW9 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Ubfd1Q78JW9 Gm24867-201ENSMUST00000104161 107 ntBASIC2.17□□□□□ -2.06
Ubfd1Q78JW9 Gm25565-201ENSMUST00000104605 105 ntBASIC2.17□□□□□ -2.06
Ubfd1Q78JW9 Gm24640-201ENSMUST00000116949 126 ntBASIC2.17□□□□□ -2.06
Ubfd1Q78JW9 Gm22626-201ENSMUST00000116990 126 ntBASIC2.17□□□□□ -2.06
Ubfd1Q78JW9 Gm12941-201ENSMUST00000117934 220 ntBASIC2.17□□□□□ -2.06
Ubfd1Q78JW9 Gm23901-201ENSMUST00000157570 107 ntBASIC2.17□□□□□ -2.06
Ubfd1Q78JW9 Gm24900-201ENSMUST00000158128 134 ntBASIC2.17□□□□□ -2.06
Ubfd1Q78JW9 Gm25654-201ENSMUST00000158467 88 ntBASIC2.17□□□□□ -2.06
Ubfd1Q78JW9 Gm24761-201ENSMUST00000179589 127 ntBASIC2.17□□□□□ -2.06
Ubfd1Q78JW9 Gm24488-201ENSMUST00000179934 127 ntBASIC2.17□□□□□ -2.06
Ubfd1Q78JW9 Gm25701-201ENSMUST00000179988 127 ntBASIC2.17□□□□□ -2.06
Ubfd1Q78JW9 Gm23571-201ENSMUST00000180073 127 ntBASIC2.17□□□□□ -2.06
Ubfd1Q78JW9 Gm26431-201ENSMUST00000180199 127 ntBASIC2.17□□□□□ -2.06
Ubfd1Q78JW9 Gm24415-201ENSMUST00000180218 107 ntBASIC2.17□□□□□ -2.06
Ubfd1Q78JW9 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Ubfd1Q78JW9 Mir300-201ENSMUST00000083485 79 ntBASIC2.17□□□□□ -2.06
Ubfd1Q78JW9 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
Ubfd1Q78JW9 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.17□□□□□ -2.06
Ubfd1Q78JW9 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.16□□□□□ -2.06
Ubfd1Q78JW9 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Ubfd1Q78JW9 Gm12771-201ENSMUST00000120246 135 ntBASIC2.16□□□□□ -2.06
Ubfd1Q78JW9 n-R5s15-201ENSMUST00000122635 111 ntBASIC2.16□□□□□ -2.06
Ubfd1Q78JW9 Gm23101-201ENSMUST00000157550 137 ntBASIC2.16□□□□□ -2.06
Ubfd1Q78JW9 Mir1967-201ENSMUST00000157789 82 ntBASIC2.16□□□□□ -2.06
Ubfd1Q78JW9 Gm7258-201ENSMUST00000179317 300 ntBASIC2.16□□□□□ -2.06
Ubfd1Q78JW9 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC2.16□□□□□ -2.06
Ubfd1Q78JW9 Mir7232-201ENSMUST00000197929 74 ntBASIC2.16□□□□□ -2.06
Ubfd1Q78JW9 Gm26379-202ENSMUST00000200225 132 ntBASIC2.16□□□□□ -2.06
Ubfd1Q78JW9 Gm6105-201ENSMUST00000200580 624 ntBASIC2.16□□□□□ -2.06
Ubfd1Q78JW9 AC154213.2-201ENSMUST00000227138 187 ntBASIC2.16□□□□□ -2.06
Ubfd1Q78JW9 Mir429-201ENSMUST00000083493 83 ntBASIC2.16□□□□□ -2.06
Ubfd1Q78JW9 Mir467g-201ENSMUST00000116906 120 ntBASIC2.15□□□□□ -2.07
Ubfd1Q78JW9 Gm22217-201ENSMUST00000157556 313 ntBASIC2.15□□□□□ -2.07
Ubfd1Q78JW9 Gm25910-201ENSMUST00000157620 140 ntBASIC2.15□□□□□ -2.07
Ubfd1Q78JW9 Gm24010-201ENSMUST00000157731 282 ntBASIC2.15□□□□□ -2.07
Ubfd1Q78JW9 Gm22159-201ENSMUST00000158412 130 ntBASIC2.15□□□□□ -2.07
Ubfd1Q78JW9 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Ubfd1Q78JW9 Gm45150-201ENSMUST00000206051 467 ntBASIC2.15□□□□□ -2.07
Ubfd1Q78JW9 AC161250.2-201ENSMUST00000215114 3107 ntBASIC2.15□□□□□ -2.07
Ubfd1Q78JW9 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
Ubfd1Q78JW9 Gm42862-201ENSMUST00000197494 2621 ntBASIC2.14□□□□□ -2.07
Ubfd1Q78JW9 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.14□□□□□ -2.07
Ubfd1Q78JW9 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Ubfd1Q78JW9 Gm23545-201ENSMUST00000158205 104 ntBASIC2.14□□□□□ -2.07
Ubfd1Q78JW9 Mir1927-201ENSMUST00000158579 109 ntBASIC2.14□□□□□ -2.07
Ubfd1Q78JW9 AC154636.2-201ENSMUST00000222538 161 ntBASIC2.14□□□□□ -2.07
Ubfd1Q78JW9 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 166.3 ms