Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Gm44990-201ENSMUST00000203922 217 ntBASIC0.34□□□□□ -2.36
Scn10aQ6QIY3 Gm43898-201ENSMUST00000204456 424 ntBASIC0.34□□□□□ -2.36
Scn10aQ6QIY3 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC0.34□□□□□ -2.36
Scn10aQ6QIY3 AC164297.3-201ENSMUST00000224238 94 ntBASIC0.34□□□□□ -2.36
Scn10aQ6QIY3 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
Scn10aQ6QIY3 Gm26011-201ENSMUST00000104410 104 ntBASIC0.33□□□□□ -2.36
Scn10aQ6QIY3 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC0.33□□□□□ -2.36
Scn10aQ6QIY3 Gm23725-201ENSMUST00000177876 107 ntBASIC0.33□□□□□ -2.36
Scn10aQ6QIY3 Gm25121-201ENSMUST00000179846 79 ntBASIC0.33□□□□□ -2.36
Scn10aQ6QIY3 Gm27717-201ENSMUST00000183933 151 ntBASIC0.33□□□□□ -2.36
Scn10aQ6QIY3 Mir703-201ENSMUST00000197105 109 ntBASIC0.33□□□□□ -2.36
Scn10aQ6QIY3 Gm44954-201ENSMUST00000208513 227 ntBASIC0.33□□□□□ -2.36
Scn10aQ6QIY3 CT954323.1-201ENSMUST00000222774 229 ntBASIC0.33□□□□□ -2.36
Scn10aQ6QIY3 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
Scn10aQ6QIY3 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.32□□□□□ -2.36
Scn10aQ6QIY3 Gm24338-201ENSMUST00000104205 127 ntBASIC0.32□□□□□ -2.36
Scn10aQ6QIY3 Gm14568-201ENSMUST00000119321 294 ntBASIC0.32□□□□□ -2.36
Scn10aQ6QIY3 Gm13729-201ENSMUST00000120328 406 ntBASIC0.32□□□□□ -2.36
Scn10aQ6QIY3 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
Scn10aQ6QIY3 Gm28343-201ENSMUST00000185386 112 ntBASIC0.32□□□□□ -2.36
Scn10aQ6QIY3 Gm43220-201ENSMUST00000199299 282 ntBASIC0.32□□□□□ -2.36
Scn10aQ6QIY3 AC116589.7-201ENSMUST00000221061 239 ntBASIC0.32□□□□□ -2.36
Scn10aQ6QIY3 AC164117.1-201ENSMUST00000221726 239 ntBASIC0.32□□□□□ -2.36
Scn10aQ6QIY3 AC117656.1-201ENSMUST00000225826 339 ntBASIC0.32□□□□□ -2.36
Scn10aQ6QIY3 Gm25697-201ENSMUST00000082902 98 ntBASIC0.32□□□□□ -2.36
Scn10aQ6QIY3 Gm25876-201ENSMUST00000104329 119 ntBASIC0.32□□□□□ -2.36
Scn10aQ6QIY3 Gm12433-201ENSMUST00000119659 255 ntBASIC0.32□□□□□ -2.36
Scn10aQ6QIY3 Gm22143-201ENSMUST00000157401 203 ntBASIC0.32□□□□□ -2.36
Scn10aQ6QIY3 Gm23557-201ENSMUST00000157820 138 ntBASIC0.32□□□□□ -2.36
Scn10aQ6QIY3 Gm22522-201ENSMUST00000158271 151 ntBASIC0.32□□□□□ -2.36
Scn10aQ6QIY3 Gm20409-201ENSMUST00000173457 130 ntBASIC0.32□□□□□ -2.36
Scn10aQ6QIY3 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
Scn10aQ6QIY3 Mir32-201ENSMUST00000083610 70 ntBASIC0.32□□□□□ -2.36
Scn10aQ6QIY3 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.31□□□□□ -2.36
Scn10aQ6QIY3 Gm23130-201ENSMUST00000104252 74 ntBASIC0.31□□□□□ -2.36
Scn10aQ6QIY3 Gm11334-201ENSMUST00000121969 156 ntBASIC0.31□□□□□ -2.36
Scn10aQ6QIY3 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC0.31□□□□□ -2.36
Scn10aQ6QIY3 Gm27793-201ENSMUST00000183405 76 ntBASIC0.31□□□□□ -2.36
Scn10aQ6QIY3 Mir191-201ENSMUST00000196210 74 ntBASIC0.31□□□□□ -2.36
Scn10aQ6QIY3 Gm44211-201ENSMUST00000204867 145 ntBASIC0.31□□□□□ -2.36
Scn10aQ6QIY3 AC124346.1-201ENSMUST00000218539 364 ntBASIC0.31□□□□□ -2.36
Scn10aQ6QIY3 AC164086.1-201ENSMUST00000221038 289 ntBASIC0.31□□□□□ -2.36
Scn10aQ6QIY3 Gm24623-201ENSMUST00000082616 194 ntBASIC0.31□□□□□ -2.36
Scn10aQ6QIY3 Snord33-201ENSMUST00000083694 84 ntBASIC0.31□□□□□ -2.36
Scn10aQ6QIY3 Gm25611-201ENSMUST00000104017 133 ntBASIC0.3□□□□□ -2.36
Scn10aQ6QIY3 Gm22489-201ENSMUST00000116813 62 ntBASIC0.3□□□□□ -2.36
Scn10aQ6QIY3 Gm9059-201ENSMUST00000118319 183 ntBASIC0.3□□□□□ -2.36
Scn10aQ6QIY3 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.3□□□□□ -2.36
Scn10aQ6QIY3 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.3□□□□□ -2.36
Scn10aQ6QIY3 Gm24678-201ENSMUST00000158756 104 ntBASIC0.3□□□□□ -2.36
Scn10aQ6QIY3 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
Scn10aQ6QIY3 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.3□□□□□ -2.36
Scn10aQ6QIY3 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC0.3□□□□□ -2.36
Scn10aQ6QIY3 Gm26326-201ENSMUST00000083070 129 ntBASIC0.3□□□□□ -2.36
Scn10aQ6QIY3 Gm11792-201ENSMUST00000120640 168 ntBASIC0.29□□□□□ -2.36
Scn10aQ6QIY3 Gm42855-201ENSMUST00000197388 253 ntBASIC0.29□□□□□ -2.36
Scn10aQ6QIY3 Gm44396-201ENSMUST00000199843 114 ntBASIC0.29□□□□□ -2.36
Scn10aQ6QIY3 CT009733.1-203ENSMUST00000224033 451 ntBASIC0.29□□□□□ -2.36
Scn10aQ6QIY3 Gm37642-201ENSMUST00000193166 1735 ntBASIC0.29□□□□□ -2.36
Scn10aQ6QIY3 Gm22935-201ENSMUST00000103960 104 ntBASIC0.28□□□□□ -2.36
Scn10aQ6QIY3 Mir3079-201ENSMUST00000175428 90 ntBASIC0.28□□□□□ -2.36
Scn10aQ6QIY3 Gm22802-201ENSMUST00000175621 89 ntBASIC0.28□□□□□ -2.36
Scn10aQ6QIY3 AC122905.2-201ENSMUST00000220325 269 ntBASIC0.28□□□□□ -2.36
Scn10aQ6QIY3 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC0.28□□□□□ -2.36
Scn10aQ6QIY3 Gm25543-201ENSMUST00000122678 312 ntBASIC0.28□□□□□ -2.36
Scn10aQ6QIY3 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC0.28□□□□□ -2.36
Scn10aQ6QIY3 Gm22983-201ENSMUST00000158308 104 ntBASIC0.28□□□□□ -2.36
Scn10aQ6QIY3 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.28□□□□□ -2.36
Scn10aQ6QIY3 Gm25949-201ENSMUST00000175333 114 ntBASIC0.28□□□□□ -2.36
Scn10aQ6QIY3 Gm16404-201ENSMUST00000177739 468 ntBASIC0.28□□□□□ -2.36
Scn10aQ6QIY3 Gm7958-201ENSMUST00000178255 468 ntBASIC0.28□□□□□ -2.36
Scn10aQ6QIY3 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
Scn10aQ6QIY3 Gm7950-201ENSMUST00000179633 468 ntBASIC0.28□□□□□ -2.36
Scn10aQ6QIY3 Gm14598-201ENSMUST00000180109 468 ntBASIC0.28□□□□□ -2.36
Scn10aQ6QIY3 Gm14625-201ENSMUST00000180231 468 ntBASIC0.28□□□□□ -2.36
Scn10aQ6QIY3 Gm28414-201ENSMUST00000190111 294 ntBASIC0.28□□□□□ -2.36
Scn10aQ6QIY3 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.28□□□□□ -2.36
Scn10aQ6QIY3 CT025689.4-201ENSMUST00000225926 601 ntBASIC0.28□□□□□ -2.36
Scn10aQ6QIY3 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
Scn10aQ6QIY3 Gm24038-201ENSMUST00000082872 159 ntBASIC0.28□□□□□ -2.36
Scn10aQ6QIY3 n-R5s188-201ENSMUST00000122646 105 ntBASIC0.27□□□□□ -2.37
Scn10aQ6QIY3 Gm25750-201ENSMUST00000175483 112 ntBASIC0.27□□□□□ -2.37
Scn10aQ6QIY3 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
Scn10aQ6QIY3 Gm18113-201ENSMUST00000220630 303 ntBASIC0.27□□□□□ -2.37
Scn10aQ6QIY3 Snord68-201ENSMUST00000082516 86 ntBASIC0.27□□□□□ -2.37
Scn10aQ6QIY3 Gm23055-201ENSMUST00000082805 94 ntBASIC0.27□□□□□ -2.37
Scn10aQ6QIY3 Gm26168-201ENSMUST00000083787 112 ntBASIC0.27□□□□□ -2.37
Scn10aQ6QIY3 Mir450-2-201ENSMUST00000102444 69 ntBASIC0.26□□□□□ -2.37
Scn10aQ6QIY3 Gm45315-201ENSMUST00000209283 333 ntBASIC0.26□□□□□ -2.37
Scn10aQ6QIY3 Gm22578-201ENSMUST00000083730 107 ntBASIC0.26□□□□□ -2.37
Scn10aQ6QIY3 Gm24490-201ENSMUST00000083803 98 ntBASIC0.26□□□□□ -2.37
Scn10aQ6QIY3 Gm15213-201ENSMUST00000122098 216 ntBASIC0.26□□□□□ -2.37
Scn10aQ6QIY3 Gm26501-201ENSMUST00000178307 107 ntBASIC0.26□□□□□ -2.37
Scn10aQ6QIY3 Gm24799-201ENSMUST00000178431 79 ntBASIC0.26□□□□□ -2.37
Scn10aQ6QIY3 Gm23144-201ENSMUST00000180226 107 ntBASIC0.26□□□□□ -2.37
Scn10aQ6QIY3 Gm44282-201ENSMUST00000203199 190 ntBASIC0.26□□□□□ -2.37
Scn10aQ6QIY3 AC164612.2-202ENSMUST00000216314 253 ntBASIC0.26□□□□□ -2.37
Scn10aQ6QIY3 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC0.26□□□□□ -2.37
Scn10aQ6QIY3 Gm24966-201ENSMUST00000082443 79 ntBASIC0.26□□□□□ -2.37
Scn10aQ6QIY3 Gm24523-201ENSMUST00000083965 132 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 138.5 ms