Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 n-R5s150-201ENSMUST00000122705 108 ntBASIC2.09□□□□□ -2.07
Smarca1Q6PGB8 Gm22984-201ENSMUST00000122751 122 ntBASIC2.09□□□□□ -2.07
Smarca1Q6PGB8 Defb44-ps-201ENSMUST00000126871 219 ntBASIC2.09□□□□□ -2.07
Smarca1Q6PGB8 Gm23982-201ENSMUST00000157141 106 ntBASIC2.09□□□□□ -2.07
Smarca1Q6PGB8 Gm24277-201ENSMUST00000158661 104 ntBASIC2.09□□□□□ -2.07
Smarca1Q6PGB8 Gm21885-201ENSMUST00000178891 327 ntBASIC2.09□□□□□ -2.07
Smarca1Q6PGB8 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Smarca1Q6PGB8 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
Smarca1Q6PGB8 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Smarca1Q6PGB8 Gm25875-201ENSMUST00000104323 107 ntBASIC2.08□□□□□ -2.08
Smarca1Q6PGB8 Gm24984-201ENSMUST00000104454 133 ntBASIC2.08□□□□□ -2.08
Smarca1Q6PGB8 Gm22494-201ENSMUST00000104495 128 ntBASIC2.08□□□□□ -2.08
Smarca1Q6PGB8 Gm23492-201ENSMUST00000116837 115 ntBASIC2.08□□□□□ -2.08
Smarca1Q6PGB8 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Smarca1Q6PGB8 Gm23640-201ENSMUST00000157860 104 ntBASIC2.08□□□□□ -2.08
Smarca1Q6PGB8 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.08□□□□□ -2.08
Smarca1Q6PGB8 Gm22118-201ENSMUST00000175593 171 ntBASIC2.08□□□□□ -2.08
Smarca1Q6PGB8 Mir7683-201ENSMUST00000183842 61 ntBASIC2.08□□□□□ -2.08
Smarca1Q6PGB8 Mir6950-201ENSMUST00000184438 73 ntBASIC2.08□□□□□ -2.08
Smarca1Q6PGB8 Gm27421-201ENSMUST00000184729 167 ntBASIC2.08□□□□□ -2.08
Smarca1Q6PGB8 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC2.08□□□□□ -2.08
Smarca1Q6PGB8 Gm44055-201ENSMUST00000204376 247 ntBASIC2.08□□□□□ -2.08
Smarca1Q6PGB8 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC2.08□□□□□ -2.08
Smarca1Q6PGB8 AC149294.9-201ENSMUST00000227256 164 ntBASIC2.08□□□□□ -2.08
Smarca1Q6PGB8 AC127371.3-201ENSMUST00000228129 415 ntBASIC2.08□□□□□ -2.08
Smarca1Q6PGB8 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.07□□□□□ -2.08
Smarca1Q6PGB8 Gm23766-201ENSMUST00000103894 80 ntBASIC2.07□□□□□ -2.08
Smarca1Q6PGB8 Gm23390-201ENSMUST00000157393 106 ntBASIC2.07□□□□□ -2.08
Smarca1Q6PGB8 Gm22217-201ENSMUST00000157556 313 ntBASIC2.07□□□□□ -2.08
Smarca1Q6PGB8 Gm22556-201ENSMUST00000157803 100 ntBASIC2.07□□□□□ -2.08
Smarca1Q6PGB8 Gm24770-201ENSMUST00000158505 92 ntBASIC2.07□□□□□ -2.08
Smarca1Q6PGB8 Gm23181-201ENSMUST00000158685 110 ntBASIC2.07□□□□□ -2.08
Smarca1Q6PGB8 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC2.07□□□□□ -2.08
Smarca1Q6PGB8 Igkv15-102-201ENSMUST00000197885 287 ntBASIC2.07□□□□□ -2.08
Smarca1Q6PGB8 Mir3970-201ENSMUST00000199287 90 ntBASIC2.07□□□□□ -2.08
Smarca1Q6PGB8 Mir3087-201ENSMUST00000199405 56 ntBASIC2.07□□□□□ -2.08
Smarca1Q6PGB8 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.07□□□□□ -2.08
Smarca1Q6PGB8 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Smarca1Q6PGB8 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC2.07□□□□□ -2.08
Smarca1Q6PGB8 Mir293-201ENSMUST00000104841 80 ntBASIC2.06□□□□□ -2.08
Smarca1Q6PGB8 Gm5900-201ENSMUST00000179862 375 ntBASIC2.06□□□□□ -2.08
Smarca1Q6PGB8 Gm26864-201ENSMUST00000181346 156 ntBASIC2.06□□□□□ -2.08
Smarca1Q6PGB8 Mir7678-201ENSMUST00000185076 71 ntBASIC2.06□□□□□ -2.08
Smarca1Q6PGB8 AC163295.1-201ENSMUST00000227840 314 ntBASIC2.06□□□□□ -2.08
Smarca1Q6PGB8 Gm9795-201ENSMUST00000062156 693 ntBASIC2.06□□□□□ -2.08
Smarca1Q6PGB8 Gm10360-201ENSMUST00000097219 272 ntBASIC2.06□□□□□ -2.08
Smarca1Q6PGB8 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Smarca1Q6PGB8 Gm25090-201ENSMUST00000104000 132 ntBASIC2.05□□□□□ -2.08
Smarca1Q6PGB8 Mup-ps22-201ENSMUST00000121611 243 ntBASIC2.05□□□□□ -2.08
Smarca1Q6PGB8 Gm24656-201ENSMUST00000177548 132 ntBASIC2.05□□□□□ -2.08
Smarca1Q6PGB8 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC2.05□□□□□ -2.08
Smarca1Q6PGB8 AC129202.1-201ENSMUST00000224895 526 ntBASIC2.05□□□□□ -2.08
Smarca1Q6PGB8 Gm26495-201ENSMUST00000083152 137 ntBASIC2.05□□□□□ -2.08
Smarca1Q6PGB8 Gm14491-201ENSMUST00000121919 199 ntBASIC2.04□□□□□ -2.08
Smarca1Q6PGB8 Gm23172-201ENSMUST00000157160 124 ntBASIC2.04□□□□□ -2.08
Smarca1Q6PGB8 Gm24440-201ENSMUST00000157236 63 ntBASIC2.04□□□□□ -2.08
Smarca1Q6PGB8 Gm22101-201ENSMUST00000157928 103 ntBASIC2.04□□□□□ -2.08
Smarca1Q6PGB8 Gm24225-201ENSMUST00000158825 98 ntBASIC2.04□□□□□ -2.08
Smarca1Q6PGB8 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.04□□□□□ -2.08
Smarca1Q6PGB8 Gm24512-201ENSMUST00000174963 65 ntBASIC2.04□□□□□ -2.08
Smarca1Q6PGB8 Mir6352-201ENSMUST00000184495 116 ntBASIC2.04□□□□□ -2.08
Smarca1Q6PGB8 Gm37778-201ENSMUST00000191732 190 ntBASIC2.04□□□□□ -2.08
Smarca1Q6PGB8 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC2.04□□□□□ -2.08
Smarca1Q6PGB8 AC153964.2-201ENSMUST00000217704 2474 ntBASIC2.04□□□□□ -2.08
Smarca1Q6PGB8 Gm22683-201ENSMUST00000082854 137 ntBASIC2.04□□□□□ -2.08
Smarca1Q6PGB8 Gm22571-201ENSMUST00000082984 70 ntBASIC2.04□□□□□ -2.08
Smarca1Q6PGB8 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Smarca1Q6PGB8 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Smarca1Q6PGB8 AC133934.2-201ENSMUST00000221729 4129 ntBASIC2.03□□□□□ -2.08
Smarca1Q6PGB8 n-R5s67-201ENSMUST00000104336 114 ntBASIC2.03□□□□□ -2.08
Smarca1Q6PGB8 Gm11388-201ENSMUST00000120908 159 ntBASIC2.03□□□□□ -2.08
Smarca1Q6PGB8 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC2.03□□□□□ -2.08
Smarca1Q6PGB8 Gm26024-201ENSMUST00000158657 322 ntBASIC2.03□□□□□ -2.08
Smarca1Q6PGB8 Gm24638-201ENSMUST00000179807 132 ntBASIC2.03□□□□□ -2.08
Smarca1Q6PGB8 Gm27747-201ENSMUST00000184707 85 ntBASIC2.03□□□□□ -2.08
Smarca1Q6PGB8 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Smarca1Q6PGB8 Gm29657-201ENSMUST00000189807 342 ntBASIC2.03□□□□□ -2.08
Smarca1Q6PGB8 AC125167.1-201ENSMUST00000198698 141 ntBASIC2.03□□□□□ -2.08
Smarca1Q6PGB8 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC2.03□□□□□ -2.08
Smarca1Q6PGB8 AC173482.5-201ENSMUST00000224181 327 ntBASIC2.03□□□□□ -2.08
Smarca1Q6PGB8 Gm23970-201ENSMUST00000083319 107 ntBASIC2.03□□□□□ -2.08
Smarca1Q6PGB8 Mir410-201ENSMUST00000083563 81 ntBASIC2.03□□□□□ -2.08
Smarca1Q6PGB8 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.09
Smarca1Q6PGB8 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Smarca1Q6PGB8 Gm14922-201ENSMUST00000121131 163 ntBASIC2.02□□□□□ -2.09
Smarca1Q6PGB8 Gm24668-201ENSMUST00000158935 104 ntBASIC2.02□□□□□ -2.09
Smarca1Q6PGB8 Gm37693-201ENSMUST00000194562 234 ntBASIC2.02□□□□□ -2.09
Smarca1Q6PGB8 Igkv13-76-201ENSMUST00000197621 347 ntBASIC2.02□□□□□ -2.09
Smarca1Q6PGB8 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Smarca1Q6PGB8 Gm5010-201ENSMUST00000213131 260 ntBASIC2.02□□□□□ -2.09
Smarca1Q6PGB8 AC160863.1-201ENSMUST00000218412 317 ntBASIC2.02□□□□□ -2.09
Smarca1Q6PGB8 Gm23039-201ENSMUST00000083870 161 ntBASIC2.02□□□□□ -2.09
Smarca1Q6PGB8 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Smarca1Q6PGB8 Gm43484-201ENSMUST00000198333 5966 ntBASIC2.02□□□□□ -2.09
Smarca1Q6PGB8 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Smarca1Q6PGB8 Gm14937-201ENSMUST00000119709 208 ntBASIC2.01□□□□□ -2.09
Smarca1Q6PGB8 Gm24909-201ENSMUST00000157290 280 ntBASIC2.01□□□□□ -2.09
Smarca1Q6PGB8 Gm25730-201ENSMUST00000178753 165 ntBASIC2.01□□□□□ -2.09
Smarca1Q6PGB8 Gm44352-201ENSMUST00000196358 110 ntBASIC2.01□□□□□ -2.09
Smarca1Q6PGB8 Gm22248-201ENSMUST00000082482 150 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 151.9 ms