Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm22083-201ENSMUST00000157586 102 ntBASIC1.74□□□□□ -2.13
Snrnp40Q6PE01 Rnu7-201ENSMUST00000158458 62 ntBASIC1.74□□□□□ -2.13
Snrnp40Q6PE01 Gm23342-201ENSMUST00000158958 115 ntBASIC1.74□□□□□ -2.13
Snrnp40Q6PE01 Gm27271-201ENSMUST00000183509 170 ntBASIC1.74□□□□□ -2.13
Snrnp40Q6PE01 Gm37763-201ENSMUST00000193445 120 ntBASIC1.74□□□□□ -2.13
Snrnp40Q6PE01 Gm45456-201ENSMUST00000210841 243 ntBASIC1.74□□□□□ -2.13
Snrnp40Q6PE01 AC173345.2-201ENSMUST00000222795 153 ntBASIC1.74□□□□□ -2.13
Snrnp40Q6PE01 AC183092.1-201ENSMUST00000224301 153 ntBASIC1.74□□□□□ -2.13
Snrnp40Q6PE01 Gm24805-201ENSMUST00000082931 104 ntBASIC1.74□□□□□ -2.13
Snrnp40Q6PE01 Gm24615-201ENSMUST00000083268 113 ntBASIC1.74□□□□□ -2.13
Snrnp40Q6PE01 Gm10222-201ENSMUST00000088336 294 ntBASIC1.74□□□□□ -2.13
Snrnp40Q6PE01 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.74□□□□□ -2.13
Snrnp40Q6PE01 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
Snrnp40Q6PE01 Gm14674-201ENSMUST00000117816 342 ntBASIC1.73□□□□□ -2.13
Snrnp40Q6PE01 Gm16510-201ENSMUST00000153501 249 ntBASIC1.73□□□□□ -2.13
Snrnp40Q6PE01 Gm22675-201ENSMUST00000158430 104 ntBASIC1.73□□□□□ -2.13
Snrnp40Q6PE01 Gm23181-201ENSMUST00000158685 110 ntBASIC1.73□□□□□ -2.13
Snrnp40Q6PE01 Gm25643-201ENSMUST00000158874 103 ntBASIC1.73□□□□□ -2.13
Snrnp40Q6PE01 Gm23714-201ENSMUST00000179259 105 ntBASIC1.73□□□□□ -2.13
Snrnp40Q6PE01 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.73□□□□□ -2.13
Snrnp40Q6PE01 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.73□□□□□ -2.13
Snrnp40Q6PE01 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC1.73□□□□□ -2.13
Snrnp40Q6PE01 Gm24625-201ENSMUST00000082622 130 ntBASIC1.73□□□□□ -2.13
Snrnp40Q6PE01 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Snrnp40Q6PE01 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC1.72□□□□□ -2.13
Snrnp40Q6PE01 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
Snrnp40Q6PE01 Gm26479-201ENSMUST00000122620 106 ntBASIC1.72□□□□□ -2.13
Snrnp40Q6PE01 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.72□□□□□ -2.13
Snrnp40Q6PE01 Gm25664-201ENSMUST00000157697 107 ntBASIC1.72□□□□□ -2.13
Snrnp40Q6PE01 Gm23640-201ENSMUST00000157860 104 ntBASIC1.72□□□□□ -2.13
Snrnp40Q6PE01 Mir1936-201ENSMUST00000158699 93 ntBASIC1.72□□□□□ -2.13
Snrnp40Q6PE01 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC1.72□□□□□ -2.13
Snrnp40Q6PE01 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC1.72□□□□□ -2.13
Snrnp40Q6PE01 Gm7958-201ENSMUST00000178255 468 ntBASIC1.72□□□□□ -2.13
Snrnp40Q6PE01 Gm7950-201ENSMUST00000179633 468 ntBASIC1.72□□□□□ -2.13
Snrnp40Q6PE01 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Snrnp40Q6PE01 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC1.72□□□□□ -2.13
Snrnp40Q6PE01 Gm29604-201ENSMUST00000187176 163 ntBASIC1.72□□□□□ -2.13
Snrnp40Q6PE01 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.72□□□□□ -2.13
Snrnp40Q6PE01 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Snrnp40Q6PE01 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC1.72□□□□□ -2.13
Snrnp40Q6PE01 Gm9795-201ENSMUST00000062156 693 ntBASIC1.72□□□□□ -2.13
Snrnp40Q6PE01 Gm5899-201ENSMUST00000071770 270 ntBASIC1.72□□□□□ -2.13
Snrnp40Q6PE01 Snord118-201ENSMUST00000082965 135 ntBASIC1.72□□□□□ -2.13
Snrnp40Q6PE01 Mir340-201ENSMUST00000083483 98 ntBASIC1.72□□□□□ -2.13
Snrnp40Q6PE01 Mir30d-201ENSMUST00000083503 82 ntBASIC1.72□□□□□ -2.13
Snrnp40Q6PE01 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.72□□□□□ -2.13
Snrnp40Q6PE01 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Snrnp40Q6PE01 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
Snrnp40Q6PE01 Gm25832-201ENSMUST00000104140 130 ntBASIC1.71□□□□□ -2.14
Snrnp40Q6PE01 Gm26156-201ENSMUST00000116999 123 ntBASIC1.71□□□□□ -2.14
Snrnp40Q6PE01 Gm14922-201ENSMUST00000121131 163 ntBASIC1.71□□□□□ -2.14
Snrnp40Q6PE01 Gm16162-201ENSMUST00000162296 297 ntBASIC1.71□□□□□ -2.14
Snrnp40Q6PE01 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC1.71□□□□□ -2.14
Snrnp40Q6PE01 Mir6388-201ENSMUST00000184417 75 ntBASIC1.71□□□□□ -2.14
Snrnp40Q6PE01 Mir7678-201ENSMUST00000185076 71 ntBASIC1.71□□□□□ -2.14
Snrnp40Q6PE01 Gm42834-201ENSMUST00000196845 256 ntBASIC1.71□□□□□ -2.14
Snrnp40Q6PE01 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC1.71□□□□□ -2.14
Snrnp40Q6PE01 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.71□□□□□ -2.14
Snrnp40Q6PE01 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Snrnp40Q6PE01 Gm24835-201ENSMUST00000116777 111 ntBASIC1.7□□□□□ -2.14
Snrnp40Q6PE01 Gm22984-201ENSMUST00000122751 122 ntBASIC1.7□□□□□ -2.14
Snrnp40Q6PE01 Gm22883-201ENSMUST00000157376 106 ntBASIC1.7□□□□□ -2.14
Snrnp40Q6PE01 Gm26150-201ENSMUST00000157426 151 ntBASIC1.7□□□□□ -2.14
Snrnp40Q6PE01 Gm23854-201ENSMUST00000158378 108 ntBASIC1.7□□□□□ -2.14
Snrnp40Q6PE01 Gm26405-201ENSMUST00000158495 100 ntBASIC1.7□□□□□ -2.14
Snrnp40Q6PE01 Gm25491-201ENSMUST00000158733 308 ntBASIC1.7□□□□□ -2.14
Snrnp40Q6PE01 Gm24818-201ENSMUST00000175093 161 ntBASIC1.7□□□□□ -2.14
Snrnp40Q6PE01 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC1.7□□□□□ -2.14
Snrnp40Q6PE01 Mir6336-201ENSMUST00000183581 130 ntBASIC1.7□□□□□ -2.14
Snrnp40Q6PE01 Gm43220-201ENSMUST00000199299 282 ntBASIC1.7□□□□□ -2.14
Snrnp40Q6PE01 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC1.7□□□□□ -2.14
Snrnp40Q6PE01 Gm45543-201ENSMUST00000209327 88 ntBASIC1.7□□□□□ -2.14
Snrnp40Q6PE01 AC160115.1-201ENSMUST00000224678 1574 ntBASIC1.7□□□□□ -2.14
Snrnp40Q6PE01 Gm25789-201ENSMUST00000083294 76 ntBASIC1.7□□□□□ -2.14
Snrnp40Q6PE01 Gm24164-201ENSMUST00000093663 104 ntBASIC1.7□□□□□ -2.14
Snrnp40Q6PE01 Gm10360-201ENSMUST00000097219 272 ntBASIC1.7□□□□□ -2.14
Snrnp40Q6PE01 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.7□□□□□ -2.14
Snrnp40Q6PE01 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.69□□□□□ -2.14
Snrnp40Q6PE01 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Snrnp40Q6PE01 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
Snrnp40Q6PE01 Gm22027-201ENSMUST00000122737 127 ntBASIC1.69□□□□□ -2.14
Snrnp40Q6PE01 Gm22281-201ENSMUST00000157198 103 ntBASIC1.69□□□□□ -2.14
Snrnp40Q6PE01 Gm26004-201ENSMUST00000158804 116 ntBASIC1.69□□□□□ -2.14
Snrnp40Q6PE01 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.69□□□□□ -2.14
Snrnp40Q6PE01 Gm28453-203ENSMUST00000187041 189 ntBASIC1.69□□□□□ -2.14
Snrnp40Q6PE01 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.69□□□□□ -2.14
Snrnp40Q6PE01 Gm28912-201ENSMUST00000189001 234 ntBASIC1.69□□□□□ -2.14
Snrnp40Q6PE01 Gm32175-201ENSMUST00000193641 346 ntBASIC1.69□□□□□ -2.14
Snrnp40Q6PE01 AC165157.3-201ENSMUST00000220815 103 ntBASIC1.69□□□□□ -2.14
Snrnp40Q6PE01 AL606472.1-201ENSMUST00000224628 275 ntBASIC1.69□□□□□ -2.14
Snrnp40Q6PE01 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Snrnp40Q6PE01 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
Snrnp40Q6PE01 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.68□□□□□ -2.14
Snrnp40Q6PE01 Gm24909-201ENSMUST00000157290 280 ntBASIC1.68□□□□□ -2.14
Snrnp40Q6PE01 Gm24478-201ENSMUST00000157439 158 ntBASIC1.68□□□□□ -2.14
Snrnp40Q6PE01 Gm25333-201ENSMUST00000158035 246 ntBASIC1.68□□□□□ -2.14
Snrnp40Q6PE01 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC1.68□□□□□ -2.14
Snrnp40Q6PE01 Gm28921-201ENSMUST00000190219 378 ntBASIC1.68□□□□□ -2.14
Snrnp40Q6PE01 Gm9251-201ENSMUST00000197202 628 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 139.8 ms