Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.39□□□□□ -2.03
Rnf220Q6PDX6 Gm18346-201ENSMUST00000216782 325 ntBASIC2.39□□□□□ -2.03
Rnf220Q6PDX6 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.39□□□□□ -2.03
Rnf220Q6PDX6 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Rnf220Q6PDX6 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Rnf220Q6PDX6 Gm25500-201ENSMUST00000104426 123 ntBASIC2.38□□□□□ -2.03
Rnf220Q6PDX6 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.38□□□□□ -2.03
Rnf220Q6PDX6 Gm23390-201ENSMUST00000157393 106 ntBASIC2.38□□□□□ -2.03
Rnf220Q6PDX6 Gm38183-201ENSMUST00000193189 205 ntBASIC2.38□□□□□ -2.03
Rnf220Q6PDX6 Gm43217-201ENSMUST00000199513 367 ntBASIC2.38□□□□□ -2.03
Rnf220Q6PDX6 Gm5010-201ENSMUST00000213131 260 ntBASIC2.38□□□□□ -2.03
Rnf220Q6PDX6 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.38□□□□□ -2.03
Rnf220Q6PDX6 AC098718.1-201ENSMUST00000226166 175 ntBASIC2.38□□□□□ -2.03
Rnf220Q6PDX6 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.38□□□□□ -2.03
Rnf220Q6PDX6 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Rnf220Q6PDX6 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Rnf220Q6PDX6 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Rnf220Q6PDX6 Snord89-201ENSMUST00000104516 110 ntBASIC2.37□□□□□ -2.03
Rnf220Q6PDX6 Gm22586-201ENSMUST00000157507 122 ntBASIC2.37□□□□□ -2.03
Rnf220Q6PDX6 Gm24879-201ENSMUST00000158386 143 ntBASIC2.37□□□□□ -2.03
Rnf220Q6PDX6 Gm37624-201ENSMUST00000193751 219 ntBASIC2.37□□□□□ -2.03
Rnf220Q6PDX6 Gm37693-201ENSMUST00000194562 234 ntBASIC2.37□□□□□ -2.03
Rnf220Q6PDX6 Gm25895-201ENSMUST00000083714 100 ntBASIC2.37□□□□□ -2.03
Rnf220Q6PDX6 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.36□□□□□ -2.03
Rnf220Q6PDX6 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Rnf220Q6PDX6 Gm22023-201ENSMUST00000104354 130 ntBASIC2.36□□□□□ -2.03
Rnf220Q6PDX6 Gm16032-201ENSMUST00000118534 168 ntBASIC2.36□□□□□ -2.03
Rnf220Q6PDX6 Gm6025-201ENSMUST00000121517 201 ntBASIC2.36□□□□□ -2.03
Rnf220Q6PDX6 Gm26411-201ENSMUST00000157668 107 ntBASIC2.36□□□□□ -2.03
Rnf220Q6PDX6 Gm25267-201ENSMUST00000158522 63 ntBASIC2.36□□□□□ -2.03
Rnf220Q6PDX6 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.36□□□□□ -2.03
Rnf220Q6PDX6 Gm6003-201ENSMUST00000187903 463 ntBASIC2.36□□□□□ -2.03
Rnf220Q6PDX6 Gm37807-201ENSMUST00000194310 190 ntBASIC2.36□□□□□ -2.03
Rnf220Q6PDX6 Gm24350-202ENSMUST00000198309 132 ntBASIC2.36□□□□□ -2.03
Rnf220Q6PDX6 Mir1a-2-201ENSMUST00000198520 72 ntBASIC2.36□□□□□ -2.03
Rnf220Q6PDX6 AC154994.1-201ENSMUST00000217395 302 ntBASIC2.36□□□□□ -2.03
Rnf220Q6PDX6 Gm46993-201ENSMUST00000220708 259 ntBASIC2.36□□□□□ -2.03
Rnf220Q6PDX6 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.36□□□□□ -2.03
Rnf220Q6PDX6 Gm25813-201ENSMUST00000082748 191 ntBASIC2.36□□□□□ -2.03
Rnf220Q6PDX6 Mir302d-201ENSMUST00000083513 66 ntBASIC2.36□□□□□ -2.03
Rnf220Q6PDX6 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Rnf220Q6PDX6 Gm23988-201ENSMUST00000117034 122 ntBASIC2.35□□□□□ -2.03
Rnf220Q6PDX6 Gm14973-201ENSMUST00000117248 255 ntBASIC2.35□□□□□ -2.03
Rnf220Q6PDX6 Gm14588-201ENSMUST00000119895 172 ntBASIC2.35□□□□□ -2.03
Rnf220Q6PDX6 Gm24015-201ENSMUST00000157725 232 ntBASIC2.35□□□□□ -2.03
Rnf220Q6PDX6 Gm23043-201ENSMUST00000157890 109 ntBASIC2.35□□□□□ -2.03
Rnf220Q6PDX6 Gm24851-201ENSMUST00000158028 103 ntBASIC2.35□□□□□ -2.03
Rnf220Q6PDX6 Gm23548-201ENSMUST00000158963 106 ntBASIC2.35□□□□□ -2.03
Rnf220Q6PDX6 Gm27285-201ENSMUST00000183875 127 ntBASIC2.35□□□□□ -2.03
Rnf220Q6PDX6 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.35□□□□□ -2.03
Rnf220Q6PDX6 AC124182.1-201ENSMUST00000227091 321 ntBASIC2.35□□□□□ -2.03
Rnf220Q6PDX6 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.34□□□□□ -2.03
Rnf220Q6PDX6 Gm22482-201ENSMUST00000122563 359 ntBASIC2.34□□□□□ -2.03
Rnf220Q6PDX6 Gm24291-201ENSMUST00000157633 162 ntBASIC2.34□□□□□ -2.03
Rnf220Q6PDX6 Mir7578-201ENSMUST00000183455 82 ntBASIC2.34□□□□□ -2.03
Rnf220Q6PDX6 Mir6388-201ENSMUST00000184417 75 ntBASIC2.34□□□□□ -2.03
Rnf220Q6PDX6 Gm28912-201ENSMUST00000189001 234 ntBASIC2.34□□□□□ -2.03
Rnf220Q6PDX6 Gm18188-201ENSMUST00000219386 478 ntBASIC2.34□□□□□ -2.03
Rnf220Q6PDX6 Gm23615-201ENSMUST00000082602 65 ntBASIC2.34□□□□□ -2.03
Rnf220Q6PDX6 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
Rnf220Q6PDX6 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.33□□□□□ -2.04
Rnf220Q6PDX6 Gm24683-201ENSMUST00000104840 88 ntBASIC2.33□□□□□ -2.04
Rnf220Q6PDX6 Gm23655-201ENSMUST00000122627 105 ntBASIC2.33□□□□□ -2.04
Rnf220Q6PDX6 Gm25280-201ENSMUST00000157269 101 ntBASIC2.33□□□□□ -2.04
Rnf220Q6PDX6 Gm22141-201ENSMUST00000157403 277 ntBASIC2.33□□□□□ -2.04
Rnf220Q6PDX6 Gm22083-201ENSMUST00000157586 102 ntBASIC2.33□□□□□ -2.04
Rnf220Q6PDX6 Gm25914-201ENSMUST00000157618 153 ntBASIC2.33□□□□□ -2.04
Rnf220Q6PDX6 Gm25368-201ENSMUST00000158847 131 ntBASIC2.33□□□□□ -2.04
Rnf220Q6PDX6 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Rnf220Q6PDX6 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.33□□□□□ -2.04
Rnf220Q6PDX6 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Rnf220Q6PDX6 Snord43-201ENSMUST00000199549 108 ntBASIC2.33□□□□□ -2.04
Rnf220Q6PDX6 Gm44052-201ENSMUST00000203382 396 ntBASIC2.33□□□□□ -2.04
Rnf220Q6PDX6 Gm27047-201ENSMUST00000183072 1819 ntBASIC2.33□□□□□ -2.04
Rnf220Q6PDX6 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.33□□□□□ -2.04
Rnf220Q6PDX6 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Rnf220Q6PDX6 Gm20477-201ENSMUST00000174028 280 ntBASIC2.32□□□□□ -2.04
Rnf220Q6PDX6 Gm27699-201ENSMUST00000183553 180 ntBASIC2.32□□□□□ -2.04
Rnf220Q6PDX6 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC2.32□□□□□ -2.04
Rnf220Q6PDX6 Gm37557-201ENSMUST00000191640 139 ntBASIC2.32□□□□□ -2.04
Rnf220Q6PDX6 Gm37997-201ENSMUST00000193515 267 ntBASIC2.32□□□□□ -2.04
Rnf220Q6PDX6 Gm36189-201ENSMUST00000204113 523 ntBASIC2.32□□□□□ -2.04
Rnf220Q6PDX6 Mir128-1-201ENSMUST00000083586 70 ntBASIC2.32□□□□□ -2.04
Rnf220Q6PDX6 Mir151-201ENSMUST00000083678 68 ntBASIC2.32□□□□□ -2.04
Rnf220Q6PDX6 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Rnf220Q6PDX6 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.32□□□□□ -2.04
Rnf220Q6PDX6 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Rnf220Q6PDX6 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
Rnf220Q6PDX6 Gm23175-201ENSMUST00000104371 132 ntBASIC2.31□□□□□ -2.04
Rnf220Q6PDX6 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Rnf220Q6PDX6 Gm22279-201ENSMUST00000157200 93 ntBASIC2.31□□□□□ -2.04
Rnf220Q6PDX6 Mir3086-201ENSMUST00000175072 87 ntBASIC2.31□□□□□ -2.04
Rnf220Q6PDX6 Gm22911-201ENSMUST00000177920 107 ntBASIC2.31□□□□□ -2.04
Rnf220Q6PDX6 Gm23860-201ENSMUST00000179446 132 ntBASIC2.31□□□□□ -2.04
Rnf220Q6PDX6 Gm27979-201ENSMUST00000185126 56 ntBASIC2.31□□□□□ -2.04
Rnf220Q6PDX6 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Rnf220Q6PDX6 Mir721-201ENSMUST00000200230 88 ntBASIC2.31□□□□□ -2.04
Rnf220Q6PDX6 Gm8031-201ENSMUST00000213430 626 ntBASIC2.31□□□□□ -2.04
Rnf220Q6PDX6 Gm30534-201ENSMUST00000217928 207 ntBASIC2.31□□□□□ -2.04
Rnf220Q6PDX6 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.31□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 160.2 ms