Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 AC183092.1-201ENSMUST00000224301 153 ntBASIC1.72□□□□□ -2.13
Herc4Q6PAV2 AC173482.4-201ENSMUST00000225096 348 ntBASIC1.72□□□□□ -2.13
Herc4Q6PAV2 Gm23055-201ENSMUST00000082805 94 ntBASIC1.72□□□□□ -2.13
Herc4Q6PAV2 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
Herc4Q6PAV2 Gm25068-201ENSMUST00000103895 110 ntBASIC1.71□□□□□ -2.14
Herc4Q6PAV2 Gm15002-201ENSMUST00000118406 452 ntBASIC1.71□□□□□ -2.14
Herc4Q6PAV2 Gm11794-201ENSMUST00000119446 237 ntBASIC1.71□□□□□ -2.14
Herc4Q6PAV2 Gm14919-201ENSMUST00000120839 390 ntBASIC1.71□□□□□ -2.14
Herc4Q6PAV2 Gm13725-201ENSMUST00000122139 207 ntBASIC1.71□□□□□ -2.14
Herc4Q6PAV2 Gm23172-201ENSMUST00000157160 124 ntBASIC1.71□□□□□ -2.14
Herc4Q6PAV2 Rnu7-201ENSMUST00000158458 62 ntBASIC1.71□□□□□ -2.14
Herc4Q6PAV2 Gm22075-201ENSMUST00000158599 192 ntBASIC1.71□□□□□ -2.14
Herc4Q6PAV2 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC1.71□□□□□ -2.14
Herc4Q6PAV2 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC1.71□□□□□ -2.14
Herc4Q6PAV2 Gm45456-201ENSMUST00000210841 243 ntBASIC1.71□□□□□ -2.14
Herc4Q6PAV2 AC145736.2-201ENSMUST00000216305 365 ntBASIC1.71□□□□□ -2.14
Herc4Q6PAV2 Gm5899-201ENSMUST00000071770 270 ntBASIC1.71□□□□□ -2.14
Herc4Q6PAV2 Gm24805-201ENSMUST00000082931 104 ntBASIC1.71□□□□□ -2.14
Herc4Q6PAV2 Gm24316-201ENSMUST00000083041 107 ntBASIC1.71□□□□□ -2.14
Herc4Q6PAV2 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Herc4Q6PAV2 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Herc4Q6PAV2 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Herc4Q6PAV2 Gm15115-201ENSMUST00000121145 264 ntBASIC1.7□□□□□ -2.14
Herc4Q6PAV2 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.7□□□□□ -2.14
Herc4Q6PAV2 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
Herc4Q6PAV2 Gm22603-201ENSMUST00000157603 96 ntBASIC1.7□□□□□ -2.14
Herc4Q6PAV2 Gm24851-201ENSMUST00000158028 103 ntBASIC1.7□□□□□ -2.14
Herc4Q6PAV2 Gm23714-201ENSMUST00000179259 105 ntBASIC1.7□□□□□ -2.14
Herc4Q6PAV2 Gm29512-201ENSMUST00000185544 315 ntBASIC1.7□□□□□ -2.14
Herc4Q6PAV2 Gm28110-201ENSMUST00000185782 315 ntBASIC1.7□□□□□ -2.14
Herc4Q6PAV2 Gm29057-201ENSMUST00000186468 315 ntBASIC1.7□□□□□ -2.14
Herc4Q6PAV2 Gm29661-201ENSMUST00000186781 315 ntBASIC1.7□□□□□ -2.14
Herc4Q6PAV2 Gm28737-201ENSMUST00000186808 315 ntBASIC1.7□□□□□ -2.14
Herc4Q6PAV2 Gm29118-201ENSMUST00000186908 315 ntBASIC1.7□□□□□ -2.14
Herc4Q6PAV2 Gm28433-201ENSMUST00000187085 315 ntBASIC1.7□□□□□ -2.14
Herc4Q6PAV2 Gm28759-201ENSMUST00000187621 315 ntBASIC1.7□□□□□ -2.14
Herc4Q6PAV2 Gm28831-201ENSMUST00000187739 315 ntBASIC1.7□□□□□ -2.14
Herc4Q6PAV2 Gm28200-201ENSMUST00000187778 315 ntBASIC1.7□□□□□ -2.14
Herc4Q6PAV2 Gm28752-201ENSMUST00000188340 315 ntBASIC1.7□□□□□ -2.14
Herc4Q6PAV2 Gm29378-201ENSMUST00000188723 315 ntBASIC1.7□□□□□ -2.14
Herc4Q6PAV2 Gm28569-201ENSMUST00000188748 315 ntBASIC1.7□□□□□ -2.14
Herc4Q6PAV2 Gm28120-201ENSMUST00000188812 315 ntBASIC1.7□□□□□ -2.14
Herc4Q6PAV2 Gm28369-201ENSMUST00000188993 315 ntBASIC1.7□□□□□ -2.14
Herc4Q6PAV2 Gm29037-201ENSMUST00000189092 313 ntBASIC1.7□□□□□ -2.14
Herc4Q6PAV2 Gm28909-201ENSMUST00000189406 315 ntBASIC1.7□□□□□ -2.14
Herc4Q6PAV2 Gm28861-201ENSMUST00000189681 315 ntBASIC1.7□□□□□ -2.14
Herc4Q6PAV2 Gm29180-201ENSMUST00000190003 315 ntBASIC1.7□□□□□ -2.14
Herc4Q6PAV2 Gm29575-201ENSMUST00000190597 315 ntBASIC1.7□□□□□ -2.14
Herc4Q6PAV2 Gm29469-201ENSMUST00000191448 315 ntBASIC1.7□□□□□ -2.14
Herc4Q6PAV2 Gm37586-201ENSMUST00000193654 204 ntBASIC1.7□□□□□ -2.14
Herc4Q6PAV2 Gm43250-201ENSMUST00000196536 273 ntBASIC1.7□□□□□ -2.14
Herc4Q6PAV2 Mir376a-201ENSMUST00000197584 68 ntBASIC1.7□□□□□ -2.14
Herc4Q6PAV2 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.7□□□□□ -2.14
Herc4Q6PAV2 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Herc4Q6PAV2 Gm24625-201ENSMUST00000082622 130 ntBASIC1.7□□□□□ -2.14
Herc4Q6PAV2 Gm23845-201ENSMUST00000083834 152 ntBASIC1.7□□□□□ -2.14
Herc4Q6PAV2 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.7□□□□□ -2.14
Herc4Q6PAV2 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.69□□□□□ -2.14
Herc4Q6PAV2 Gm14674-201ENSMUST00000117816 342 ntBASIC1.69□□□□□ -2.14
Herc4Q6PAV2 Gm14782-201ENSMUST00000120151 195 ntBASIC1.69□□□□□ -2.14
Herc4Q6PAV2 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Herc4Q6PAV2 Gm22281-201ENSMUST00000157198 103 ntBASIC1.69□□□□□ -2.14
Herc4Q6PAV2 Gm22814-201ENSMUST00000157452 104 ntBASIC1.69□□□□□ -2.14
Herc4Q6PAV2 Gm23854-201ENSMUST00000158378 108 ntBASIC1.69□□□□□ -2.14
Herc4Q6PAV2 Gm26405-201ENSMUST00000158495 100 ntBASIC1.69□□□□□ -2.14
Herc4Q6PAV2 Gm29665-201ENSMUST00000191457 528 ntBASIC1.69□□□□□ -2.14
Herc4Q6PAV2 Gm37338-201ENSMUST00000191986 127 ntBASIC1.69□□□□□ -2.14
Herc4Q6PAV2 Gm9251-201ENSMUST00000197202 628 ntBASIC1.69□□□□□ -2.14
Herc4Q6PAV2 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Herc4Q6PAV2 Gm44473-201ENSMUST00000204039 152 ntBASIC1.69□□□□□ -2.14
Herc4Q6PAV2 Gm45005-201ENSMUST00000206640 157 ntBASIC1.69□□□□□ -2.14
Herc4Q6PAV2 Snord118-201ENSMUST00000082965 135 ntBASIC1.69□□□□□ -2.14
Herc4Q6PAV2 Gm23451-201ENSMUST00000083328 122 ntBASIC1.69□□□□□ -2.14
Herc4Q6PAV2 Mir320-201ENSMUST00000083594 82 ntBASIC1.69□□□□□ -2.14
Herc4Q6PAV2 AC102369.2-201ENSMUST00000219725 1679 ntBASIC1.69□□□□□ -2.14
Herc4Q6PAV2 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.69□□□□□ -2.14
Herc4Q6PAV2 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Herc4Q6PAV2 Gm26156-201ENSMUST00000116999 123 ntBASIC1.68□□□□□ -2.14
Herc4Q6PAV2 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Herc4Q6PAV2 Gm23542-201ENSMUST00000158208 96 ntBASIC1.68□□□□□ -2.14
Herc4Q6PAV2 Gm25491-201ENSMUST00000158733 308 ntBASIC1.68□□□□□ -2.14
Herc4Q6PAV2 Gm27271-201ENSMUST00000183509 170 ntBASIC1.68□□□□□ -2.14
Herc4Q6PAV2 Gm37713-201ENSMUST00000191746 198 ntBASIC1.68□□□□□ -2.14
Herc4Q6PAV2 Gm42834-201ENSMUST00000196845 256 ntBASIC1.68□□□□□ -2.14
Herc4Q6PAV2 Gm45313-201ENSMUST00000210584 178 ntBASIC1.68□□□□□ -2.14
Herc4Q6PAV2 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Herc4Q6PAV2 Gm26447-201ENSMUST00000082448 129 ntBASIC1.68□□□□□ -2.14
Herc4Q6PAV2 Gm25789-201ENSMUST00000083294 76 ntBASIC1.68□□□□□ -2.14
Herc4Q6PAV2 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.68□□□□□ -2.14
Herc4Q6PAV2 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Herc4Q6PAV2 Gm15102-201ENSMUST00000118740 1502 ntBASIC1.67□□□□□ -2.14
Herc4Q6PAV2 Gm11572-201ENSMUST00000119164 120 ntBASIC1.67□□□□□ -2.14
Herc4Q6PAV2 Gm13992-201ENSMUST00000120558 156 ntBASIC1.67□□□□□ -2.14
Herc4Q6PAV2 Gm24632-201ENSMUST00000122770 323 ntBASIC1.67□□□□□ -2.14
Herc4Q6PAV2 Gm26150-201ENSMUST00000157426 151 ntBASIC1.67□□□□□ -2.14
Herc4Q6PAV2 Gm23474-201ENSMUST00000158884 75 ntBASIC1.67□□□□□ -2.14
Herc4Q6PAV2 Gm22951-201ENSMUST00000179471 107 ntBASIC1.67□□□□□ -2.14
Herc4Q6PAV2 Gm27793-201ENSMUST00000183405 76 ntBASIC1.67□□□□□ -2.14
Herc4Q6PAV2 Mir6388-201ENSMUST00000184417 75 ntBASIC1.67□□□□□ -2.14
Herc4Q6PAV2 Gm27997-201ENSMUST00000184942 69 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 130.5 ms