Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC-0.21□□□□□ -2.44
Col7a1Q63870 Gm24977-201ENSMUST00000083106 163 ntBASIC-0.21□□□□□ -2.44
Col7a1Q63870 Gm24616-201ENSMUST00000083274 139 ntBASIC-0.21□□□□□ -2.44
Col7a1Q63870 Gm22738-201ENSMUST00000083440 147 ntBASIC-0.21□□□□□ -2.44
Col7a1Q63870 Gm16242-201ENSMUST00000117741 334 ntBASIC-0.22□□□□□ -2.44
Col7a1Q63870 Gm13603-201ENSMUST00000119404 83 ntBASIC-0.22□□□□□ -2.44
Col7a1Q63870 Gm11522-201ENSMUST00000120533 176 ntBASIC-0.22□□□□□ -2.44
Col7a1Q63870 Gm13725-201ENSMUST00000122139 207 ntBASIC-0.22□□□□□ -2.44
Col7a1Q63870 Gm26371-201ENSMUST00000157829 104 ntBASIC-0.22□□□□□ -2.44
Col7a1Q63870 Gm22385-201ENSMUST00000158189 101 ntBASIC-0.22□□□□□ -2.44
Col7a1Q63870 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.22□□□□□ -2.44
Col7a1Q63870 Gm16307-201ENSMUST00000161269 210 ntBASIC-0.22□□□□□ -2.44
Col7a1Q63870 Gm26245-201ENSMUST00000178491 107 ntBASIC-0.22□□□□□ -2.44
Col7a1Q63870 Gm27421-201ENSMUST00000184729 167 ntBASIC-0.22□□□□□ -2.44
Col7a1Q63870 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC-0.22□□□□□ -2.44
Col7a1Q63870 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC-0.22□□□□□ -2.44
Col7a1Q63870 Gm35843-201ENSMUST00000193716 666 ntBASIC-0.22□□□□□ -2.44
Col7a1Q63870 Gm18747-201ENSMUST00000198129 648 ntBASIC-0.22□□□□□ -2.44
Col7a1Q63870 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC-0.22□□□□□ -2.44
Col7a1Q63870 Gm44327-201ENSMUST00000200068 117 ntBASIC-0.22□□□□□ -2.44
Col7a1Q63870 Gm5955-201ENSMUST00000222712 219 ntBASIC-0.22□□□□□ -2.44
Col7a1Q63870 AC133654.1-201ENSMUST00000228411 672 ntBASIC-0.22□□□□□ -2.44
Col7a1Q63870 Gm23056-201ENSMUST00000082803 111 ntBASIC-0.22□□□□□ -2.44
Col7a1Q63870 Mir30c-2-201ENSMUST00000083633 84 ntBASIC-0.22□□□□□ -2.44
Col7a1Q63870 Gm23104-201ENSMUST00000083722 104 ntBASIC-0.22□□□□□ -2.44
Col7a1Q63870 Gm24523-201ENSMUST00000083965 132 ntBASIC-0.22□□□□□ -2.44
Col7a1Q63870 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC-0.22□□□□□ -2.44
Col7a1Q63870 Mir18b-201ENSMUST00000103923 83 ntBASIC-0.22□□□□□ -2.45
Col7a1Q63870 Gm24375-201ENSMUST00000104397 132 ntBASIC-0.22□□□□□ -2.45
Col7a1Q63870 Gm15176-201ENSMUST00000117734 135 ntBASIC-0.22□□□□□ -2.45
Col7a1Q63870 Gm11794-201ENSMUST00000119446 237 ntBASIC-0.22□□□□□ -2.45
Col7a1Q63870 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC-0.22□□□□□ -2.45
Col7a1Q63870 Gm6568-201ENSMUST00000122274 697 ntBASIC-0.22□□□□□ -2.45
Col7a1Q63870 Gm22479-201ENSMUST00000122566 81 ntBASIC-0.22□□□□□ -2.45
Col7a1Q63870 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC-0.22□□□□□ -2.45
Col7a1Q63870 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC-0.22□□□□□ -2.45
Col7a1Q63870 Gm22319-201ENSMUST00000157147 122 ntBASIC-0.22□□□□□ -2.45
Col7a1Q63870 Gm25559-201ENSMUST00000157182 74 ntBASIC-0.22□□□□□ -2.45
Col7a1Q63870 Gm22221-201ENSMUST00000157362 103 ntBASIC-0.22□□□□□ -2.45
Col7a1Q63870 Gm25898-201ENSMUST00000158303 106 ntBASIC-0.22□□□□□ -2.45
Col7a1Q63870 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC-0.22□□□□□ -2.45
Col7a1Q63870 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC-0.22□□□□□ -2.45
Col7a1Q63870 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC-0.22□□□□□ -2.45
Col7a1Q63870 Gm44391-201ENSMUST00000198490 93 ntBASIC-0.22□□□□□ -2.45
Col7a1Q63870 AC117656.1-201ENSMUST00000225826 339 ntBASIC-0.22□□□□□ -2.45
Col7a1Q63870 Gm25006-201ENSMUST00000083813 107 ntBASIC-0.22□□□□□ -2.45
Col7a1Q63870 Gm25417-201ENSMUST00000104212 131 ntBASIC-0.23□□□□□ -2.45
Col7a1Q63870 Mir654-201ENSMUST00000104787 84 ntBASIC-0.23□□□□□ -2.45
Col7a1Q63870 Gm14358-201ENSMUST00000118458 403 ntBASIC-0.23□□□□□ -2.45
Col7a1Q63870 Gm22914-201ENSMUST00000175195 77 ntBASIC-0.23□□□□□ -2.45
Col7a1Q63870 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC-0.23□□□□□ -2.45
Col7a1Q63870 Gm28648-201ENSMUST00000190092 343 ntBASIC-0.23□□□□□ -2.45
Col7a1Q63870 Gm38395-201ENSMUST00000199904 830 ntBASIC-0.23□□□□□ -2.45
Col7a1Q63870 Igkv13-82-201ENSMUST00000200308 346 ntBASIC-0.23□□□□□ -2.45
Col7a1Q63870 Gm43038-201ENSMUST00000202359 88 ntBASIC-0.23□□□□□ -2.45
Col7a1Q63870 Gm45471-201ENSMUST00000211270 281 ntBASIC-0.23□□□□□ -2.45
Col7a1Q63870 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC-0.23□□□□□ -2.45
Col7a1Q63870 AC156560.1-201ENSMUST00000221425 256 ntBASIC-0.23□□□□□ -2.45
Col7a1Q63870 AC140477.1-201ENSMUST00000222354 246 ntBASIC-0.23□□□□□ -2.45
Col7a1Q63870 Gm22972-201ENSMUST00000083297 131 ntBASIC-0.23□□□□□ -2.45
Col7a1Q63870 Gm22786-201ENSMUST00000104086 122 ntBASIC-0.23□□□□□ -2.45
Col7a1Q63870 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC-0.23□□□□□ -2.45
Col7a1Q63870 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC-0.23□□□□□ -2.45
Col7a1Q63870 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC-0.23□□□□□ -2.45
Col7a1Q63870 Gm15654-201ENSMUST00000152660 300 ntBASIC-0.23□□□□□ -2.45
Col7a1Q63870 Gm22654-201ENSMUST00000157874 105 ntBASIC-0.23□□□□□ -2.45
Col7a1Q63870 Gm22098-201ENSMUST00000157930 85 ntBASIC-0.23□□□□□ -2.45
Col7a1Q63870 Scarna3a-201ENSMUST00000158911 140 ntBASIC-0.23□□□□□ -2.45
Col7a1Q63870 Gm24668-201ENSMUST00000158935 104 ntBASIC-0.23□□□□□ -2.45
Col7a1Q63870 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC-0.23□□□□□ -2.45
Col7a1Q63870 Mir1264-201ENSMUST00000175381 86 ntBASIC-0.23□□□□□ -2.45
Col7a1Q63870 Gm25472-201ENSMUST00000175454 78 ntBASIC-0.23□□□□□ -2.45
Col7a1Q63870 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC-0.23□□□□□ -2.45
Col7a1Q63870 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC-0.23□□□□□ -2.45
Col7a1Q63870 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC-0.23□□□□□ -2.45
Col7a1Q63870 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0.23□□□□□ -2.45
Col7a1Q63870 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC-0.23□□□□□ -2.45
Col7a1Q63870 AC154552.7-201ENSMUST00000222824 156 ntBASIC-0.23□□□□□ -2.45
Col7a1Q63870 AC154282.1-201ENSMUST00000223154 265 ntBASIC-0.23□□□□□ -2.45
Col7a1Q63870 AC163295.1-201ENSMUST00000227840 314 ntBASIC-0.23□□□□□ -2.45
Col7a1Q63870 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC-0.23□□□□□ -2.45
Col7a1Q63870 Gm24524-201ENSMUST00000082925 170 ntBASIC-0.23□□□□□ -2.45
Col7a1Q63870 Gm22884-201ENSMUST00000083127 140 ntBASIC-0.23□□□□□ -2.45
Col7a1Q63870 Mir350-201ENSMUST00000083639 99 ntBASIC-0.23□□□□□ -2.45
Col7a1Q63870 Gm12045-201ENSMUST00000122122 573 ntBASIC-0.24□□□□□ -2.45
Col7a1Q63870 Gm22452-201ENSMUST00000122804 104 ntBASIC-0.24□□□□□ -2.45
Col7a1Q63870 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC-0.24□□□□□ -2.45
Col7a1Q63870 Gm16373-201ENSMUST00000129517 303 ntBASIC-0.24□□□□□ -2.45
Col7a1Q63870 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC-0.24□□□□□ -2.45
Col7a1Q63870 Gm22226-201ENSMUST00000157355 109 ntBASIC-0.24□□□□□ -2.45
Col7a1Q63870 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC-0.24□□□□□ -2.45
Col7a1Q63870 Mir5124b-201ENSMUST00000184251 85 ntBASIC-0.24□□□□□ -2.45
Col7a1Q63870 Gm44404-201ENSMUST00000203979 636 ntBASIC-0.24□□□□□ -2.45
Col7a1Q63870 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC-0.24□□□□□ -2.45
Col7a1Q63870 Gm22827-201ENSMUST00000083766 107 ntBASIC-0.24□□□□□ -2.45
Col7a1Q63870 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC-0.24□□□□□ -2.45
Col7a1Q63870 Gm26339-201ENSMUST00000102368 99 ntBASIC-0.24□□□□□ -2.45
Col7a1Q63870 Mir804-201ENSMUST00000103251 95 ntBASIC-0.24□□□□□ -2.45
Col7a1Q63870 Gm23431-201ENSMUST00000104006 107 ntBASIC-0.24□□□□□ -2.45
Col7a1Q63870 Gm23586-201ENSMUST00000157657 123 ntBASIC-0.24□□□□□ -2.45
Retrieved 100 of 76,532 protein–RNA pairs in 291.1 ms