Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Gm24165-201ENSMUST00000082718 128 ntBASIC1.8□□□□□ -2.12
Trim27Q62158 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC1.79□□□□□ -2.12
Trim27Q62158 Gm23170-201ENSMUST00000157158 106 ntBASIC1.79□□□□□ -2.12
Trim27Q62158 Gm22215-201ENSMUST00000157558 96 ntBASIC1.79□□□□□ -2.12
Trim27Q62158 Gm22603-201ENSMUST00000157603 96 ntBASIC1.79□□□□□ -2.12
Trim27Q62158 Gm22537-201ENSMUST00000158172 199 ntBASIC1.79□□□□□ -2.12
Trim27Q62158 Gm27493-201ENSMUST00000184128 78 ntBASIC1.79□□□□□ -2.12
Trim27Q62158 Gm29147-201ENSMUST00000186846 315 ntBASIC1.79□□□□□ -2.12
Trim27Q62158 Gm29227-201ENSMUST00000187139 315 ntBASIC1.79□□□□□ -2.12
Trim27Q62158 Gm29034-201ENSMUST00000188099 315 ntBASIC1.79□□□□□ -2.12
Trim27Q62158 Gm28537-201ENSMUST00000189026 315 ntBASIC1.79□□□□□ -2.12
Trim27Q62158 Gm29631-201ENSMUST00000191065 315 ntBASIC1.79□□□□□ -2.12
Trim27Q62158 Gm28160-201ENSMUST00000191229 315 ntBASIC1.79□□□□□ -2.12
Trim27Q62158 Gm37129-201ENSMUST00000195791 315 ntBASIC1.79□□□□□ -2.12
Trim27Q62158 Gm11351-202ENSMUST00000225724 478 ntBASIC1.79□□□□□ -2.12
Trim27Q62158 Gm23055-201ENSMUST00000082805 94 ntBASIC1.79□□□□□ -2.12
Trim27Q62158 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.78□□□□□ -2.12
Trim27Q62158 Gm22491-201ENSMUST00000157190 102 ntBASIC1.78□□□□□ -2.12
Trim27Q62158 Gm22814-201ENSMUST00000157452 104 ntBASIC1.78□□□□□ -2.12
Trim27Q62158 Gm24076-201ENSMUST00000158179 94 ntBASIC1.78□□□□□ -2.12
Trim27Q62158 Gm24501-201ENSMUST00000158452 62 ntBASIC1.78□□□□□ -2.12
Trim27Q62158 Gm29613-201ENSMUST00000185846 313 ntBASIC1.78□□□□□ -2.12
Trim27Q62158 Gm29544-201ENSMUST00000188860 313 ntBASIC1.78□□□□□ -2.12
Trim27Q62158 Gm28808-201ENSMUST00000190978 313 ntBASIC1.78□□□□□ -2.12
Trim27Q62158 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Trim27Q62158 Gm44858-201ENSMUST00000207360 154 ntBASIC1.78□□□□□ -2.12
Trim27Q62158 Gm5010-201ENSMUST00000213131 260 ntBASIC1.78□□□□□ -2.12
Trim27Q62158 AL603630.1-201ENSMUST00000214781 147 ntBASIC1.78□□□□□ -2.12
Trim27Q62158 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.78□□□□□ -2.12
Trim27Q62158 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.78□□□□□ -2.12
Trim27Q62158 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Trim27Q62158 Gm12512-201ENSMUST00000119620 217 ntBASIC1.77□□□□□ -2.13
Trim27Q62158 Defb44-ps-201ENSMUST00000126871 219 ntBASIC1.77□□□□□ -2.13
Trim27Q62158 Gm24222-201ENSMUST00000158834 93 ntBASIC1.77□□□□□ -2.13
Trim27Q62158 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC1.77□□□□□ -2.13
Trim27Q62158 AC163033.1-201ENSMUST00000218608 157 ntBASIC1.77□□□□□ -2.13
Trim27Q62158 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.77□□□□□ -2.13
Trim27Q62158 Gm16976-205ENSMUST00000227324 226 ntBASIC1.77□□□□□ -2.13
Trim27Q62158 Gm10092-201ENSMUST00000077110 180 ntBASIC1.77□□□□□ -2.13
Trim27Q62158 Snord14a-201ENSMUST00000082807 87 ntBASIC1.77□□□□□ -2.13
Trim27Q62158 Mir221-201ENSMUST00000083488 95 ntBASIC1.77□□□□□ -2.13
Trim27Q62158 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
Trim27Q62158 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Trim27Q62158 Mir301b-201ENSMUST00000102333 97 ntBASIC1.76□□□□□ -2.13
Trim27Q62158 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC1.76□□□□□ -2.13
Trim27Q62158 Gm14922-201ENSMUST00000121131 163 ntBASIC1.76□□□□□ -2.13
Trim27Q62158 Gm24895-201ENSMUST00000122742 74 ntBASIC1.76□□□□□ -2.13
Trim27Q62158 Gm17113-201ENSMUST00000170118 171 ntBASIC1.76□□□□□ -2.13
Trim27Q62158 Gm23714-201ENSMUST00000179259 105 ntBASIC1.76□□□□□ -2.13
Trim27Q62158 Gm29665-201ENSMUST00000191457 528 ntBASIC1.76□□□□□ -2.13
Trim27Q62158 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC1.76□□□□□ -2.13
Trim27Q62158 Mir465d-201ENSMUST00000196314 58 ntBASIC1.76□□□□□ -2.13
Trim27Q62158 Gm24966-201ENSMUST00000082443 79 ntBASIC1.76□□□□□ -2.13
Trim27Q62158 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Trim27Q62158 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Trim27Q62158 Gm24262-201ENSMUST00000157431 144 ntBASIC1.75□□□□□ -2.13
Trim27Q62158 Gm25423-201ENSMUST00000157609 107 ntBASIC1.75□□□□□ -2.13
Trim27Q62158 Gm24847-201ENSMUST00000158032 108 ntBASIC1.75□□□□□ -2.13
Trim27Q62158 Gm25958-201ENSMUST00000175114 71 ntBASIC1.75□□□□□ -2.13
Trim27Q62158 Gm9251-201ENSMUST00000197202 628 ntBASIC1.75□□□□□ -2.13
Trim27Q62158 Gm44962-201ENSMUST00000206460 279 ntBASIC1.75□□□□□ -2.13
Trim27Q62158 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC1.75□□□□□ -2.13
Trim27Q62158 AC163646.2-201ENSMUST00000227962 141 ntBASIC1.75□□□□□ -2.13
Trim27Q62158 CT030170.3-201ENSMUST00000221205 1815 ntBASIC1.75□□□□□ -2.13
Trim27Q62158 Gm26135-201ENSMUST00000101993 72 ntBASIC1.74□□□□□ -2.13
Trim27Q62158 Mir767-201ENSMUST00000103256 107 ntBASIC1.74□□□□□ -2.13
Trim27Q62158 Gm25068-201ENSMUST00000103895 110 ntBASIC1.74□□□□□ -2.13
Trim27Q62158 Gm22963-201ENSMUST00000157960 91 ntBASIC1.74□□□□□ -2.13
Trim27Q62158 Gm25831-201ENSMUST00000158924 163 ntBASIC1.74□□□□□ -2.13
Trim27Q62158 Snord50b-201ENSMUST00000178497 72 ntBASIC1.74□□□□□ -2.13
Trim27Q62158 Gm37801-201ENSMUST00000194754 274 ntBASIC1.74□□□□□ -2.13
Trim27Q62158 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.74□□□□□ -2.13
Trim27Q62158 Gm23836-201ENSMUST00000104434 129 ntBASIC1.73□□□□□ -2.13
Trim27Q62158 Gm14882-201ENSMUST00000117216 218 ntBASIC1.73□□□□□ -2.13
Trim27Q62158 Gm24229-201ENSMUST00000158830 118 ntBASIC1.73□□□□□ -2.13
Trim27Q62158 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC1.73□□□□□ -2.13
Trim27Q62158 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Trim27Q62158 Gm7958-201ENSMUST00000178255 468 ntBASIC1.73□□□□□ -2.13
Trim27Q62158 Gm7950-201ENSMUST00000179633 468 ntBASIC1.73□□□□□ -2.13
Trim27Q62158 Gm27997-201ENSMUST00000184942 69 ntBASIC1.73□□□□□ -2.13
Trim27Q62158 Gm28453-203ENSMUST00000187041 189 ntBASIC1.73□□□□□ -2.13
Trim27Q62158 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.73□□□□□ -2.13
Trim27Q62158 AC125167.1-201ENSMUST00000198698 141 ntBASIC1.73□□□□□ -2.13
Trim27Q62158 Gm19855-201ENSMUST00000210145 249 ntBASIC1.73□□□□□ -2.13
Trim27Q62158 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.73□□□□□ -2.13
Trim27Q62158 Gm25357-201ENSMUST00000082745 72 ntBASIC1.73□□□□□ -2.13
Trim27Q62158 Gm23845-201ENSMUST00000083834 152 ntBASIC1.73□□□□□ -2.13
Trim27Q62158 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Trim27Q62158 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.72□□□□□ -2.13
Trim27Q62158 Gm28008-201ENSMUST00000184021 186 ntBASIC1.72□□□□□ -2.13
Trim27Q62158 Gm27640-201ENSMUST00000184580 147 ntBASIC1.72□□□□□ -2.13
Trim27Q62158 mt-Tr-201ENSMUST00000082412 68 ntBASIC1.72□□□□□ -2.13
Trim27Q62158 Gm25930-201ENSMUST00000082785 107 ntBASIC1.72□□□□□ -2.13
Trim27Q62158 Gm24038-201ENSMUST00000082872 159 ntBASIC1.72□□□□□ -2.13
Trim27Q62158 Gm26107-201ENSMUST00000083972 107 ntBASIC1.72□□□□□ -2.13
Trim27Q62158 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Trim27Q62158 Gm25832-201ENSMUST00000104140 130 ntBASIC1.71□□□□□ -2.14
Trim27Q62158 Gm25541-201ENSMUST00000116888 126 ntBASIC1.71□□□□□ -2.14
Trim27Q62158 Gm13967-201ENSMUST00000120404 380 ntBASIC1.71□□□□□ -2.14
Trim27Q62158 Gm23208-201ENSMUST00000158666 127 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms