Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm42960-201ENSMUST00000202160 241 ntBASIC2.31□□□□□ -2.04
Ift88Q61371 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC2.31□□□□□ -2.04
Ift88Q61371 AC154213.2-201ENSMUST00000227138 187 ntBASIC2.31□□□□□ -2.04
Ift88Q61371 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Ift88Q61371 AC153964.2-201ENSMUST00000217704 2474 ntBASIC2.31□□□□□ -2.04
Ift88Q61371 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Ift88Q61371 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.3□□□□□ -2.04
Ift88Q61371 Gm24632-201ENSMUST00000122770 323 ntBASIC2.3□□□□□ -2.04
Ift88Q61371 Gm24237-201ENSMUST00000157790 132 ntBASIC2.3□□□□□ -2.04
Ift88Q61371 Gm16162-201ENSMUST00000162296 297 ntBASIC2.3□□□□□ -2.04
Ift88Q61371 Gm24816-201ENSMUST00000175311 151 ntBASIC2.3□□□□□ -2.04
Ift88Q61371 Gm27585-201ENSMUST00000183717 199 ntBASIC2.3□□□□□ -2.04
Ift88Q61371 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC2.3□□□□□ -2.04
Ift88Q61371 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.3□□□□□ -2.04
Ift88Q61371 Gm24453-201ENSMUST00000083346 76 ntBASIC2.3□□□□□ -2.04
Ift88Q61371 Gm22744-201ENSMUST00000083444 65 ntBASIC2.3□□□□□ -2.04
Ift88Q61371 Gm42862-201ENSMUST00000197494 2621 ntBASIC2.29□□□□□ -2.04
Ift88Q61371 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
Ift88Q61371 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Ift88Q61371 Gm25783-201ENSMUST00000122525 190 ntBASIC2.29□□□□□ -2.04
Ift88Q61371 Gm23101-201ENSMUST00000157550 137 ntBASIC2.29□□□□□ -2.04
Ift88Q61371 Gm22217-201ENSMUST00000157556 313 ntBASIC2.29□□□□□ -2.04
Ift88Q61371 Rnu7-201ENSMUST00000158458 62 ntBASIC2.29□□□□□ -2.04
Ift88Q61371 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Ift88Q61371 Gm29262-201ENSMUST00000190084 196 ntBASIC2.29□□□□□ -2.04
Ift88Q61371 Gm6105-201ENSMUST00000200580 624 ntBASIC2.29□□□□□ -2.04
Ift88Q61371 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC2.29□□□□□ -2.04
Ift88Q61371 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC2.29□□□□□ -2.04
Ift88Q61371 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.29□□□□□ -2.04
Ift88Q61371 Gm24536-201ENSMUST00000083144 107 ntBASIC2.29□□□□□ -2.04
Ift88Q61371 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Ift88Q61371 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Ift88Q61371 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Ift88Q61371 Gm24079-201ENSMUST00000104352 132 ntBASIC2.28□□□□□ -2.04
Ift88Q61371 Gm24010-201ENSMUST00000157731 282 ntBASIC2.28□□□□□ -2.04
Ift88Q61371 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC2.28□□□□□ -2.04
Ift88Q61371 Mir3075-201ENSMUST00000175340 85 ntBASIC2.28□□□□□ -2.04
Ift88Q61371 Mir7016-201ENSMUST00000184308 72 ntBASIC2.28□□□□□ -2.04
Ift88Q61371 Mir7081-201ENSMUST00000184490 75 ntBASIC2.28□□□□□ -2.04
Ift88Q61371 Mir6916-201ENSMUST00000184514 63 ntBASIC2.28□□□□□ -2.04
Ift88Q61371 Gm34139-201ENSMUST00000196166 294 ntBASIC2.28□□□□□ -2.04
Ift88Q61371 Gm3724-201ENSMUST00000197957 349 ntBASIC2.28□□□□□ -2.04
Ift88Q61371 Mir3961-201ENSMUST00000198795 59 ntBASIC2.28□□□□□ -2.04
Ift88Q61371 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC2.28□□□□□ -2.04
Ift88Q61371 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.28□□□□□ -2.04
Ift88Q61371 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.28□□□□□ -2.05
Ift88Q61371 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Ift88Q61371 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.27□□□□□ -2.05
Ift88Q61371 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.27□□□□□ -2.05
Ift88Q61371 Gm26279-201ENSMUST00000157095 102 ntBASIC2.27□□□□□ -2.05
Ift88Q61371 Gm22159-201ENSMUST00000158412 130 ntBASIC2.27□□□□□ -2.05
Ift88Q61371 Gm23342-201ENSMUST00000158958 115 ntBASIC2.27□□□□□ -2.05
Ift88Q61371 Gm24333-201ENSMUST00000175101 84 ntBASIC2.27□□□□□ -2.05
Ift88Q61371 Gm6796-201ENSMUST00000211919 243 ntBASIC2.27□□□□□ -2.05
Ift88Q61371 Mir127-201ENSMUST00000093568 70 ntBASIC2.27□□□□□ -2.05
Ift88Q61371 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Ift88Q61371 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
Ift88Q61371 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.26□□□□□ -2.05
Ift88Q61371 Gm26482-201ENSMUST00000158015 62 ntBASIC2.26□□□□□ -2.05
Ift88Q61371 Gm23571-201ENSMUST00000180073 127 ntBASIC2.26□□□□□ -2.05
Ift88Q61371 Gm25788-201ENSMUST00000082721 131 ntBASIC2.26□□□□□ -2.05
Ift88Q61371 Snord118-201ENSMUST00000082965 135 ntBASIC2.26□□□□□ -2.05
Ift88Q61371 Mir146-201ENSMUST00000083667 65 ntBASIC2.26□□□□□ -2.05
Ift88Q61371 Gm22154-201ENSMUST00000083844 131 ntBASIC2.26□□□□□ -2.05
Ift88Q61371 Gm22866-201ENSMUST00000083947 177 ntBASIC2.26□□□□□ -2.05
Ift88Q61371 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.25□□□□□ -2.05
Ift88Q61371 Gm24274-201ENSMUST00000116787 124 ntBASIC2.25□□□□□ -2.05
Ift88Q61371 Gm14588-201ENSMUST00000119895 172 ntBASIC2.25□□□□□ -2.05
Ift88Q61371 Gm13797-201ENSMUST00000121792 120 ntBASIC2.25□□□□□ -2.05
Ift88Q61371 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Ift88Q61371 Gm23864-201ENSMUST00000177607 107 ntBASIC2.25□□□□□ -2.05
Ift88Q61371 Gm25935-201ENSMUST00000178746 107 ntBASIC2.25□□□□□ -2.05
Ift88Q61371 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC2.25□□□□□ -2.05
Ift88Q61371 Gm33866-201ENSMUST00000196911 289 ntBASIC2.25□□□□□ -2.05
Ift88Q61371 Gm25513-201ENSMUST00000083861 162 ntBASIC2.25□□□□□ -2.05
Ift88Q61371 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
Ift88Q61371 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Ift88Q61371 Gm15214-201ENSMUST00000122155 470 ntBASIC2.24□□□□□ -2.05
Ift88Q61371 Gm25834-201ENSMUST00000158916 101 ntBASIC2.24□□□□□ -2.05
Ift88Q61371 Gm9156-201ENSMUST00000189660 463 ntBASIC2.24□□□□□ -2.05
Ift88Q61371 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Ift88Q61371 Igkv13-76-201ENSMUST00000197621 347 ntBASIC2.24□□□□□ -2.05
Ift88Q61371 AC126672.1-201ENSMUST00000217096 396 ntBASIC2.24□□□□□ -2.05
Ift88Q61371 Gm25634-201ENSMUST00000082667 105 ntBASIC2.24□□□□□ -2.05
Ift88Q61371 Mir93-201ENSMUST00000083593 88 ntBASIC2.24□□□□□ -2.05
Ift88Q61371 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Ift88Q61371 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.24□□□□□ -2.05
Ift88Q61371 Gm15861-201ENSMUST00000120979 339 ntBASIC2.23□□□□□ -2.05
Ift88Q61371 Gm23584-201ENSMUST00000157655 129 ntBASIC2.23□□□□□ -2.05
Ift88Q61371 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC2.23□□□□□ -2.05
Ift88Q61371 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC2.23□□□□□ -2.05
Ift88Q61371 Gm43587-201ENSMUST00000199590 204 ntBASIC2.23□□□□□ -2.05
Ift88Q61371 AC154636.2-201ENSMUST00000222538 161 ntBASIC2.23□□□□□ -2.05
Ift88Q61371 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.23□□□□□ -2.05
Ift88Q61371 Mir384-201ENSMUST00000083565 88 ntBASIC2.23□□□□□ -2.05
Ift88Q61371 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Ift88Q61371 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
Ift88Q61371 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC2.22□□□□□ -2.05
Ift88Q61371 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.22□□□□□ -2.05
Ift88Q61371 Mir466h-201ENSMUST00000104748 81 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms