Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm25457-201ENSMUST00000179509 107 ntBASIC2.37□□□□□ -2.03
CtcfQ61164 Gm27585-201ENSMUST00000183717 199 ntBASIC2.37□□□□□ -2.03
CtcfQ61164 Mir7039-201ENSMUST00000183852 85 ntBASIC2.37□□□□□ -2.03
CtcfQ61164 AC157476.1-201ENSMUST00000215555 169 ntBASIC2.37□□□□□ -2.03
CtcfQ61164 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.37□□□□□ -2.03
CtcfQ61164 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC2.37□□□□□ -2.03
CtcfQ61164 Gm23803-201ENSMUST00000104610 132 ntBASIC2.36□□□□□ -2.03
CtcfQ61164 Gm26249-201ENSMUST00000116708 118 ntBASIC2.36□□□□□ -2.03
CtcfQ61164 Gm25625-201ENSMUST00000157221 96 ntBASIC2.36□□□□□ -2.03
CtcfQ61164 Gm25914-201ENSMUST00000157618 153 ntBASIC2.36□□□□□ -2.03
CtcfQ61164 Gm23350-201ENSMUST00000158429 103 ntBASIC2.36□□□□□ -2.03
CtcfQ61164 Gm25051-201ENSMUST00000158602 249 ntBASIC2.36□□□□□ -2.03
CtcfQ61164 Gm44429-201ENSMUST00000203542 186 ntBASIC2.36□□□□□ -2.03
CtcfQ61164 Gm6796-201ENSMUST00000211919 243 ntBASIC2.36□□□□□ -2.03
CtcfQ61164 AC154636.2-201ENSMUST00000222538 161 ntBASIC2.36□□□□□ -2.03
CtcfQ61164 Gm24966-201ENSMUST00000082443 79 ntBASIC2.36□□□□□ -2.03
CtcfQ61164 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.35□□□□□ -2.03
CtcfQ61164 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.35□□□□□ -2.03
CtcfQ61164 Gm26015-201ENSMUST00000104402 125 ntBASIC2.35□□□□□ -2.03
CtcfQ61164 Gm15365-201ENSMUST00000122392 300 ntBASIC2.35□□□□□ -2.03
CtcfQ61164 Gm11204-201ENSMUST00000122438 147 ntBASIC2.35□□□□□ -2.03
CtcfQ61164 Gm22883-201ENSMUST00000157376 106 ntBASIC2.35□□□□□ -2.03
CtcfQ61164 Mir1927-201ENSMUST00000158579 109 ntBASIC2.35□□□□□ -2.03
CtcfQ61164 Gm25996-201ENSMUST00000175393 117 ntBASIC2.35□□□□□ -2.03
CtcfQ61164 Gm24388-201ENSMUST00000177872 107 ntBASIC2.35□□□□□ -2.03
CtcfQ61164 Gm23571-201ENSMUST00000180073 127 ntBASIC2.35□□□□□ -2.03
CtcfQ61164 Gm27465-201ENSMUST00000184290 91 ntBASIC2.35□□□□□ -2.03
CtcfQ61164 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.35□□□□□ -2.03
CtcfQ61164 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC2.35□□□□□ -2.03
CtcfQ61164 AC165293.1-201ENSMUST00000219669 329 ntBASIC2.35□□□□□ -2.03
CtcfQ61164 Gm22978-201ENSMUST00000082607 160 ntBASIC2.35□□□□□ -2.03
CtcfQ61164 Gm22704-201ENSMUST00000083027 137 ntBASIC2.35□□□□□ -2.03
CtcfQ61164 Gm24132-201ENSMUST00000104745 91 ntBASIC2.34□□□□□ -2.03
CtcfQ61164 Gm23889-201ENSMUST00000122689 104 ntBASIC2.34□□□□□ -2.03
CtcfQ61164 Gm24379-201ENSMUST00000122695 86 ntBASIC2.34□□□□□ -2.03
CtcfQ61164 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CtcfQ61164 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CtcfQ61164 Gm23584-201ENSMUST00000157655 129 ntBASIC2.34□□□□□ -2.03
CtcfQ61164 Mir1967-201ENSMUST00000157789 82 ntBASIC2.34□□□□□ -2.03
CtcfQ61164 Gm22097-201ENSMUST00000157929 278 ntBASIC2.34□□□□□ -2.03
CtcfQ61164 Gm16561-201ENSMUST00000163001 192 ntBASIC2.34□□□□□ -2.03
CtcfQ61164 Gm37624-201ENSMUST00000193751 219 ntBASIC2.34□□□□□ -2.03
CtcfQ61164 Gm44408-201ENSMUST00000200205 66 ntBASIC2.34□□□□□ -2.03
CtcfQ61164 Gm44563-201ENSMUST00000207958 178 ntBASIC2.34□□□□□ -2.03
CtcfQ61164 CT010449.1-201ENSMUST00000220624 153 ntBASIC2.34□□□□□ -2.03
CtcfQ61164 Mir300-201ENSMUST00000083485 79 ntBASIC2.34□□□□□ -2.03
CtcfQ61164 Gm26175-201ENSMUST00000083794 131 ntBASIC2.34□□□□□ -2.03
CtcfQ61164 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
CtcfQ61164 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
CtcfQ61164 Gm23013-201ENSMUST00000104146 106 ntBASIC2.33□□□□□ -2.04
CtcfQ61164 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC2.33□□□□□ -2.04
CtcfQ61164 Gm22800-201ENSMUST00000175627 94 ntBASIC2.33□□□□□ -2.04
CtcfQ61164 Gm28900-201ENSMUST00000185232 156 ntBASIC2.33□□□□□ -2.04
CtcfQ61164 Gm37997-201ENSMUST00000193515 267 ntBASIC2.33□□□□□ -2.04
CtcfQ61164 AC167669.4-201ENSMUST00000225967 140 ntBASIC2.33□□□□□ -2.04
CtcfQ61164 AC122834.1-201ENSMUST00000227182 425 ntBASIC2.33□□□□□ -2.04
CtcfQ61164 AC122320.1-201ENSMUST00000227233 105 ntBASIC2.33□□□□□ -2.04
CtcfQ61164 Gm24355-201ENSMUST00000082858 122 ntBASIC2.33□□□□□ -2.04
CtcfQ61164 Gm25124-201ENSMUST00000083345 164 ntBASIC2.33□□□□□ -2.04
CtcfQ61164 Mir146-201ENSMUST00000083667 65 ntBASIC2.33□□□□□ -2.04
CtcfQ61164 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
CtcfQ61164 Mir466p-201ENSMUST00000103925 89 ntBASIC2.32□□□□□ -2.04
CtcfQ61164 Gm23048-201ENSMUST00000157237 129 ntBASIC2.32□□□□□ -2.04
CtcfQ61164 Gm17067-202ENSMUST00000180131 123 ntBASIC2.32□□□□□ -2.04
CtcfQ61164 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
CtcfQ61164 Gm29005-201ENSMUST00000186773 320 ntBASIC2.32□□□□□ -2.04
CtcfQ61164 Gm29167-201ENSMUST00000190024 377 ntBASIC2.32□□□□□ -2.04
CtcfQ61164 Gm43676-201ENSMUST00000197532 540 ntBASIC2.32□□□□□ -2.04
CtcfQ61164 Snord82-201ENSMUST00000082889 70 ntBASIC2.32□□□□□ -2.04
CtcfQ61164 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC2.32□□□□□ -2.04
CtcfQ61164 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.32□□□□□ -2.04
CtcfQ61164 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC2.31□□□□□ -2.04
CtcfQ61164 n-R5s150-201ENSMUST00000122705 108 ntBASIC2.31□□□□□ -2.04
CtcfQ61164 Gm16510-201ENSMUST00000153501 249 ntBASIC2.31□□□□□ -2.04
CtcfQ61164 Gm25961-201ENSMUST00000157174 135 ntBASIC2.31□□□□□ -2.04
CtcfQ61164 Gm23536-201ENSMUST00000157541 134 ntBASIC2.31□□□□□ -2.04
CtcfQ61164 Gm25888-201ENSMUST00000157778 302 ntBASIC2.31□□□□□ -2.04
CtcfQ61164 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
CtcfQ61164 Gm23289-201ENSMUST00000175615 108 ntBASIC2.31□□□□□ -2.04
CtcfQ61164 Mir6399-201ENSMUST00000184050 84 ntBASIC2.31□□□□□ -2.04
CtcfQ61164 Gm27399-201ENSMUST00000184250 78 ntBASIC2.31□□□□□ -2.04
CtcfQ61164 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC2.31□□□□□ -2.04
CtcfQ61164 Gm43427-201ENSMUST00000198188 331 ntBASIC2.31□□□□□ -2.04
CtcfQ61164 Gm42774-201ENSMUST00000198854 283 ntBASIC2.31□□□□□ -2.04
CtcfQ61164 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CtcfQ61164 Gm20144-201ENSMUST00000203031 165 ntBASIC2.31□□□□□ -2.04
CtcfQ61164 Gm45543-201ENSMUST00000209327 88 ntBASIC2.31□□□□□ -2.04
CtcfQ61164 Gm18188-201ENSMUST00000219386 478 ntBASIC2.31□□□□□ -2.04
CtcfQ61164 Gm22217-201ENSMUST00000157556 313 ntBASIC2.3□□□□□ -2.04
CtcfQ61164 Gm22093-201ENSMUST00000158980 111 ntBASIC2.3□□□□□ -2.04
CtcfQ61164 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC2.3□□□□□ -2.04
CtcfQ61164 Mir6406-201ENSMUST00000183592 120 ntBASIC2.3□□□□□ -2.04
CtcfQ61164 Gm37377-201ENSMUST00000191733 304 ntBASIC2.3□□□□□ -2.04
CtcfQ61164 Mir7217-201ENSMUST00000200304 62 ntBASIC2.3□□□□□ -2.04
CtcfQ61164 AC154213.2-201ENSMUST00000227138 187 ntBASIC2.3□□□□□ -2.04
CtcfQ61164 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.3□□□□□ -2.04
CtcfQ61164 Gm24163-201ENSMUST00000093660 132 ntBASIC2.3□□□□□ -2.04
CtcfQ61164 Gm10360-201ENSMUST00000097219 272 ntBASIC2.3□□□□□ -2.04
CtcfQ61164 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CtcfQ61164 Gm23492-201ENSMUST00000116837 115 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms