Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Gm22559-201ENSMUST00000157329 134 ntBASIC1.2□□□□□ -2.22
Usf1Q61069 Snord13-201ENSMUST00000157627 104 ntBASIC1.2□□□□□ -2.22
Usf1Q61069 Gm26400-201ENSMUST00000175012 85 ntBASIC1.2□□□□□ -2.22
Usf1Q61069 Gm28288-201ENSMUST00000191019 214 ntBASIC1.2□□□□□ -2.22
Usf1Q61069 Gm37399-201ENSMUST00000195224 416 ntBASIC1.2□□□□□ -2.22
Usf1Q61069 Gm34783-201ENSMUST00000209159 303 ntBASIC1.2□□□□□ -2.22
Usf1Q61069 Mir32-201ENSMUST00000083610 70 ntBASIC1.2□□□□□ -2.22
Usf1Q61069 Gm23347-201ENSMUST00000083823 82 ntBASIC1.2□□□□□ -2.22
Usf1Q61069 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC1.19□□□□□ -2.22
Usf1Q61069 Mir7063-201ENSMUST00000184158 91 ntBASIC1.19□□□□□ -2.22
Usf1Q61069 Mir7675-201ENSMUST00000184262 58 ntBASIC1.19□□□□□ -2.22
Usf1Q61069 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC1.19□□□□□ -2.22
Usf1Q61069 Gm28992-201ENSMUST00000190534 139 ntBASIC1.19□□□□□ -2.22
Usf1Q61069 Gm43220-201ENSMUST00000199299 282 ntBASIC1.19□□□□□ -2.22
Usf1Q61069 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
Usf1Q61069 Mir496a-201ENSMUST00000093627 79 ntBASIC1.19□□□□□ -2.22
Usf1Q61069 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Usf1Q61069 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
Usf1Q61069 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
Usf1Q61069 Gm23221-201ENSMUST00000158118 93 ntBASIC1.18□□□□□ -2.22
Usf1Q61069 Gm17113-201ENSMUST00000170118 171 ntBASIC1.18□□□□□ -2.22
Usf1Q61069 Gm23921-201ENSMUST00000175258 107 ntBASIC1.18□□□□□ -2.22
Usf1Q61069 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.18□□□□□ -2.22
Usf1Q61069 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC1.18□□□□□ -2.22
Usf1Q61069 Gm25929-201ENSMUST00000082784 107 ntBASIC1.18□□□□□ -2.22
Usf1Q61069 Gm26329-201ENSMUST00000093723 110 ntBASIC1.18□□□□□ -2.22
Usf1Q61069 Gm22598-201ENSMUST00000157600 127 ntBASIC1.17□□□□□ -2.22
Usf1Q61069 Gm24504-201ENSMUST00000157679 100 ntBASIC1.17□□□□□ -2.22
Usf1Q61069 Gm26194-201ENSMUST00000175036 71 ntBASIC1.17□□□□□ -2.22
Usf1Q61069 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC1.17□□□□□ -2.22
Usf1Q61069 Gm37089-201ENSMUST00000195616 129 ntBASIC1.17□□□□□ -2.22
Usf1Q61069 Gm43250-201ENSMUST00000196536 273 ntBASIC1.17□□□□□ -2.22
Usf1Q61069 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Usf1Q61069 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC1.17□□□□□ -2.22
Usf1Q61069 Gm45116-201ENSMUST00000207392 275 ntBASIC1.17□□□□□ -2.22
Usf1Q61069 Gm19855-201ENSMUST00000210145 249 ntBASIC1.17□□□□□ -2.22
Usf1Q61069 AC124182.1-201ENSMUST00000227091 321 ntBASIC1.17□□□□□ -2.22
Usf1Q61069 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.17□□□□□ -2.22
Usf1Q61069 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.17□□□□□ -2.22
Usf1Q61069 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.17□□□□□ -2.22
Usf1Q61069 Gm25759-201ENSMUST00000103988 129 ntBASIC1.16□□□□□ -2.22
Usf1Q61069 Defb44-ps-201ENSMUST00000126871 219 ntBASIC1.16□□□□□ -2.22
Usf1Q61069 Gm25982-201ENSMUST00000157920 101 ntBASIC1.16□□□□□ -2.22
Usf1Q61069 Gm24942-201ENSMUST00000158328 114 ntBASIC1.16□□□□□ -2.22
Usf1Q61069 Gm25715-201ENSMUST00000158627 125 ntBASIC1.16□□□□□ -2.22
Usf1Q61069 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
Usf1Q61069 Gm23793-201ENSMUST00000179396 117 ntBASIC1.16□□□□□ -2.22
Usf1Q61069 Gm28409-201ENSMUST00000187064 103 ntBASIC1.16□□□□□ -2.22
Usf1Q61069 Gm37713-201ENSMUST00000191746 198 ntBASIC1.16□□□□□ -2.22
Usf1Q61069 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.16□□□□□ -2.22
Usf1Q61069 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.16□□□□□ -2.22
Usf1Q61069 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC1.16□□□□□ -2.22
Usf1Q61069 Gm23625-201ENSMUST00000082457 100 ntBASIC1.16□□□□□ -2.22
Usf1Q61069 Gm24163-201ENSMUST00000093660 132 ntBASIC1.16□□□□□ -2.22
Usf1Q61069 Gm23836-201ENSMUST00000104434 129 ntBASIC1.15□□□□□ -2.23
Usf1Q61069 Gm12309-201ENSMUST00000119889 182 ntBASIC1.15□□□□□ -2.23
Usf1Q61069 Gm14922-201ENSMUST00000121131 163 ntBASIC1.15□□□□□ -2.23
Usf1Q61069 Gm14980-201ENSMUST00000121247 736 ntBASIC1.15□□□□□ -2.23
Usf1Q61069 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.15□□□□□ -2.23
Usf1Q61069 Gm16358-201ENSMUST00000146046 210 ntBASIC1.15□□□□□ -2.23
Usf1Q61069 Gm24277-201ENSMUST00000158661 104 ntBASIC1.15□□□□□ -2.23
Usf1Q61069 Gm24818-201ENSMUST00000175093 161 ntBASIC1.15□□□□□ -2.23
Usf1Q61069 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.15□□□□□ -2.23
Usf1Q61069 Gm45207-201ENSMUST00000207469 145 ntBASIC1.15□□□□□ -2.23
Usf1Q61069 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
Usf1Q61069 n-R5s94-201ENSMUST00000082573 119 ntBASIC1.15□□□□□ -2.23
Usf1Q61069 Gm24261-201ENSMUST00000083744 104 ntBASIC1.15□□□□□ -2.23
Usf1Q61069 Gm10730-201ENSMUST00000194097 2723 ntBASIC1.15□□□□□ -2.23
Usf1Q61069 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Usf1Q61069 Gm11857-201ENSMUST00000119817 324 ntBASIC1.14□□□□□ -2.23
Usf1Q61069 Gm24192-201ENSMUST00000157978 145 ntBASIC1.14□□□□□ -2.23
Usf1Q61069 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Usf1Q61069 Gm21064-202ENSMUST00000190583 278 ntBASIC1.14□□□□□ -2.23
Usf1Q61069 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Usf1Q61069 Mir7661-201ENSMUST00000197023 61 ntBASIC1.14□□□□□ -2.23
Usf1Q61069 Gm24966-201ENSMUST00000082443 79 ntBASIC1.14□□□□□ -2.23
Usf1Q61069 Gm23242-201ENSMUST00000083055 107 ntBASIC1.14□□□□□ -2.23
Usf1Q61069 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Usf1Q61069 Gm25495-201ENSMUST00000104431 131 ntBASIC1.13□□□□□ -2.23
Usf1Q61069 Gm13518-201ENSMUST00000120018 233 ntBASIC1.13□□□□□ -2.23
Usf1Q61069 Gm15214-201ENSMUST00000122155 470 ntBASIC1.13□□□□□ -2.23
Usf1Q61069 Gm23232-201ENSMUST00000157300 105 ntBASIC1.13□□□□□ -2.23
Usf1Q61069 Traj60-201ENSMUST00000167781 54 ntBASIC1.13□□□□□ -2.23
Usf1Q61069 Gm23355-201ENSMUST00000177614 107 ntBASIC1.13□□□□□ -2.23
Usf1Q61069 Gm23148-201ENSMUST00000180367 107 ntBASIC1.13□□□□□ -2.23
Usf1Q61069 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC1.13□□□□□ -2.23
Usf1Q61069 Mir7663-201ENSMUST00000183950 61 ntBASIC1.13□□□□□ -2.23
Usf1Q61069 AC125167.1-201ENSMUST00000198698 141 ntBASIC1.13□□□□□ -2.23
Usf1Q61069 AC154296.2-201ENSMUST00000214696 545 ntBASIC1.13□□□□□ -2.23
Usf1Q61069 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.13□□□□□ -2.23
Usf1Q61069 Gm25038-201ENSMUST00000082928 130 ntBASIC1.13□□□□□ -2.23
Usf1Q61069 Gm25258-201ENSMUST00000083049 107 ntBASIC1.13□□□□□ -2.23
Usf1Q61069 Gm23851-201ENSMUST00000083831 103 ntBASIC1.13□□□□□ -2.23
Usf1Q61069 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.12□□□□□ -2.23
Usf1Q61069 Gm26339-201ENSMUST00000102368 99 ntBASIC1.12□□□□□ -2.23
Usf1Q61069 Mir544-201ENSMUST00000103813 78 ntBASIC1.12□□□□□ -2.23
Usf1Q61069 Gm23907-201ENSMUST00000104595 189 ntBASIC1.12□□□□□ -2.23
Usf1Q61069 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
Usf1Q61069 Gm22945-201ENSMUST00000158557 157 ntBASIC1.12□□□□□ -2.23
Usf1Q61069 Gm25284-201ENSMUST00000180345 141 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 132.2 ms