Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2□□□□□ -2.09
ClpbQ60649 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
ClpbQ60649 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
ClpbQ60649 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC2□□□□□ -2.09
ClpbQ60649 Gm24632-201ENSMUST00000122770 323 ntBASIC2□□□□□ -2.09
ClpbQ60649 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC2□□□□□ -2.09
ClpbQ60649 Gm24277-201ENSMUST00000158661 104 ntBASIC2□□□□□ -2.09
ClpbQ60649 Snora15-201ENSMUST00000177461 131 ntBASIC2□□□□□ -2.09
ClpbQ60649 Snord43-201ENSMUST00000199549 108 ntBASIC2□□□□□ -2.09
ClpbQ60649 Gm45859-201ENSMUST00000212794 214 ntBASIC2□□□□□ -2.09
ClpbQ60649 Gm22248-201ENSMUST00000082482 150 ntBASIC2□□□□□ -2.09
ClpbQ60649 Gm25813-201ENSMUST00000082748 191 ntBASIC2□□□□□ -2.09
ClpbQ60649 Mir222-201ENSMUST00000083537 79 ntBASIC2□□□□□ -2.09
ClpbQ60649 Gm43373-201ENSMUST00000202552 2870 ntBASIC2□□□□□ -2.09
ClpbQ60649 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
ClpbQ60649 AC154515.1-201ENSMUST00000226085 2841 ntBASIC1.99□□□□□ -2.09
ClpbQ60649 Mir881-201ENSMUST00000104844 78 ntBASIC1.99□□□□□ -2.09
ClpbQ60649 Gm15162-201ENSMUST00000119325 283 ntBASIC1.99□□□□□ -2.09
ClpbQ60649 Gm12686-201ENSMUST00000120546 397 ntBASIC1.99□□□□□ -2.09
ClpbQ60649 Gm13433-201ENSMUST00000121701 240 ntBASIC1.99□□□□□ -2.09
ClpbQ60649 Gm23469-201ENSMUST00000157131 104 ntBASIC1.99□□□□□ -2.09
ClpbQ60649 Gm24237-201ENSMUST00000157790 132 ntBASIC1.99□□□□□ -2.09
ClpbQ60649 Gm22768-201ENSMUST00000158366 153 ntBASIC1.99□□□□□ -2.09
ClpbQ60649 Gm26022-201ENSMUST00000158663 108 ntBASIC1.99□□□□□ -2.09
ClpbQ60649 Gm17113-201ENSMUST00000170118 171 ntBASIC1.99□□□□□ -2.09
ClpbQ60649 Gm23047-201ENSMUST00000177661 94 ntBASIC1.99□□□□□ -2.09
ClpbQ60649 Gm9156-201ENSMUST00000189660 463 ntBASIC1.99□□□□□ -2.09
ClpbQ60649 AC159896.1-201ENSMUST00000215264 215 ntBASIC1.99□□□□□ -2.09
ClpbQ60649 Mir322-201ENSMUST00000083484 95 ntBASIC1.99□□□□□ -2.09
ClpbQ60649 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
ClpbQ60649 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.98□□□□□ -2.09
ClpbQ60649 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
ClpbQ60649 Gm24098-201ENSMUST00000102075 109 ntBASIC1.98□□□□□ -2.09
ClpbQ60649 Gm25381-201ENSMUST00000102078 109 ntBASIC1.98□□□□□ -2.09
ClpbQ60649 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
ClpbQ60649 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
ClpbQ60649 Snord70-201ENSMUST00000104157 87 ntBASIC1.98□□□□□ -2.09
ClpbQ60649 Gm22494-201ENSMUST00000104495 128 ntBASIC1.98□□□□□ -2.09
ClpbQ60649 Gm25333-201ENSMUST00000158035 246 ntBASIC1.98□□□□□ -2.09
ClpbQ60649 Gm23854-201ENSMUST00000158378 108 ntBASIC1.98□□□□□ -2.09
ClpbQ60649 Gm23548-201ENSMUST00000158963 106 ntBASIC1.98□□□□□ -2.09
ClpbQ60649 Gm27402-201ENSMUST00000183890 120 ntBASIC1.98□□□□□ -2.09
ClpbQ60649 Mir6388-201ENSMUST00000184417 75 ntBASIC1.98□□□□□ -2.09
ClpbQ60649 Mir7226-201ENSMUST00000184953 60 ntBASIC1.98□□□□□ -2.09
ClpbQ60649 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
ClpbQ60649 AC125167.1-201ENSMUST00000198698 141 ntBASIC1.98□□□□□ -2.09
ClpbQ60649 Hmgb1l-201ENSMUST00000082150 571 ntBASIC1.98□□□□□ -2.09
ClpbQ60649 Mir107-201ENSMUST00000083660 87 ntBASIC1.98□□□□□ -2.09
ClpbQ60649 Snora33-201ENSMUST00000093556 129 ntBASIC1.98□□□□□ -2.09
ClpbQ60649 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC1.98□□□□□ -2.09
ClpbQ60649 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.97□□□□□ -2.09
ClpbQ60649 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
ClpbQ60649 Gm23705-201ENSMUST00000104370 130 ntBASIC1.97□□□□□ -2.09
ClpbQ60649 Gm25460-201ENSMUST00000157954 127 ntBASIC1.97□□□□□ -2.09
ClpbQ60649 Mir1951-201ENSMUST00000157981 89 ntBASIC1.97□□□□□ -2.09
ClpbQ60649 Gm24006-201ENSMUST00000158462 132 ntBASIC1.97□□□□□ -2.09
ClpbQ60649 Gm19123-201ENSMUST00000190716 651 ntBASIC1.97□□□□□ -2.09
ClpbQ60649 Gm43563-201ENSMUST00000196761 198 ntBASIC1.97□□□□□ -2.09
ClpbQ60649 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
ClpbQ60649 AC157476.1-201ENSMUST00000215555 169 ntBASIC1.97□□□□□ -2.09
ClpbQ60649 Gm25204-201ENSMUST00000082843 106 ntBASIC1.97□□□□□ -2.09
ClpbQ60649 Mir151-201ENSMUST00000083678 68 ntBASIC1.97□□□□□ -2.09
ClpbQ60649 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.09
ClpbQ60649 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
ClpbQ60649 Gm25113-201ENSMUST00000157185 143 ntBASIC1.96□□□□□ -2.1
ClpbQ60649 Gm23182-201ENSMUST00000158688 135 ntBASIC1.96□□□□□ -2.1
ClpbQ60649 Mir3086-201ENSMUST00000175072 87 ntBASIC1.96□□□□□ -2.1
ClpbQ60649 Mir6997-201ENSMUST00000184313 71 ntBASIC1.96□□□□□ -2.1
ClpbQ60649 Gm27421-201ENSMUST00000184729 167 ntBASIC1.96□□□□□ -2.1
ClpbQ60649 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC1.96□□□□□ -2.1
ClpbQ60649 Gm18617-201ENSMUST00000222311 259 ntBASIC1.96□□□□□ -2.1
ClpbQ60649 CT954323.1-201ENSMUST00000222774 229 ntBASIC1.96□□□□□ -2.1
ClpbQ60649 Gm24412-201ENSMUST00000083426 109 ntBASIC1.96□□□□□ -2.1
ClpbQ60649 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.96□□□□□ -2.1
ClpbQ60649 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
ClpbQ60649 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
ClpbQ60649 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
ClpbQ60649 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
ClpbQ60649 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.95□□□□□ -2.1
ClpbQ60649 Gm23852-201ENSMUST00000158376 77 ntBASIC1.95□□□□□ -2.1
ClpbQ60649 Gm2962-201ENSMUST00000159266 336 ntBASIC1.95□□□□□ -2.1
ClpbQ60649 Gm25994-201ENSMUST00000175392 101 ntBASIC1.95□□□□□ -2.1
ClpbQ60649 Gm25749-201ENSMUST00000175485 111 ntBASIC1.95□□□□□ -2.1
ClpbQ60649 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
ClpbQ60649 Gm27979-201ENSMUST00000185126 56 ntBASIC1.95□□□□□ -2.1
ClpbQ60649 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.95□□□□□ -2.1
ClpbQ60649 Snora19-201ENSMUST00000082962 132 ntBASIC1.95□□□□□ -2.1
ClpbQ60649 Gm24042-201ENSMUST00000083114 103 ntBASIC1.95□□□□□ -2.1
ClpbQ60649 Gm23658-201ENSMUST00000083233 132 ntBASIC1.95□□□□□ -2.1
ClpbQ60649 Mir301-201ENSMUST00000083655 86 ntBASIC1.95□□□□□ -2.1
ClpbQ60649 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC1.95□□□□□ -2.1
ClpbQ60649 Gm43473-201ENSMUST00000200442 5997 ntBASIC1.94□□□□□ -2.1
ClpbQ60649 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.94□□□□□ -2.1
ClpbQ60649 n-R5s200-201ENSMUST00000104194 113 ntBASIC1.94□□□□□ -2.1
ClpbQ60649 Gm23841-201ENSMUST00000116951 114 ntBASIC1.94□□□□□ -2.1
ClpbQ60649 Gm13588-201ENSMUST00000120026 135 ntBASIC1.94□□□□□ -2.1
ClpbQ60649 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
ClpbQ60649 Mir1949-201ENSMUST00000157434 141 ntBASIC1.94□□□□□ -2.1
ClpbQ60649 Gm27579-201ENSMUST00000158113 63 ntBASIC1.94□□□□□ -2.1
ClpbQ60649 Gm25371-201ENSMUST00000158162 101 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms