Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm26479-201ENSMUST00000122620 106 ntBASIC1.92□□□□□ -2.1
Vps54Q5SPW0 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.92□□□□□ -2.1
Vps54Q5SPW0 Gm23581-201ENSMUST00000158531 63 ntBASIC1.92□□□□□ -2.1
Vps54Q5SPW0 Gm24277-201ENSMUST00000158661 104 ntBASIC1.92□□□□□ -2.1
Vps54Q5SPW0 Gm24174-201ENSMUST00000158933 111 ntBASIC1.92□□□□□ -2.1
Vps54Q5SPW0 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.92□□□□□ -2.1
Vps54Q5SPW0 Gm24510-201ENSMUST00000174965 94 ntBASIC1.92□□□□□ -2.1
Vps54Q5SPW0 Snord87-201ENSMUST00000175437 87 ntBASIC1.92□□□□□ -2.1
Vps54Q5SPW0 Mir6995-201ENSMUST00000183658 71 ntBASIC1.92□□□□□ -2.1
Vps54Q5SPW0 Gm44491-201ENSMUST00000196794 96 ntBASIC1.92□□□□□ -2.1
Vps54Q5SPW0 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Vps54Q5SPW0 Gm10092-201ENSMUST00000077110 180 ntBASIC1.92□□□□□ -2.1
Vps54Q5SPW0 Gm25402-201ENSMUST00000082966 131 ntBASIC1.92□□□□□ -2.1
Vps54Q5SPW0 Gm24536-201ENSMUST00000083144 107 ntBASIC1.92□□□□□ -2.1
Vps54Q5SPW0 Gm23679-201ENSMUST00000083161 119 ntBASIC1.92□□□□□ -2.1
Vps54Q5SPW0 Gm23970-201ENSMUST00000083319 107 ntBASIC1.92□□□□□ -2.1
Vps54Q5SPW0 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Vps54Q5SPW0 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.92□□□□□ -2.1
Vps54Q5SPW0 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Vps54Q5SPW0 Gm25875-201ENSMUST00000104323 107 ntBASIC1.91□□□□□ -2.1
Vps54Q5SPW0 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Vps54Q5SPW0 Gm22321-201ENSMUST00000157152 104 ntBASIC1.91□□□□□ -2.1
Vps54Q5SPW0 Gm24847-201ENSMUST00000158032 108 ntBASIC1.91□□□□□ -2.1
Vps54Q5SPW0 Gm22075-201ENSMUST00000158599 192 ntBASIC1.91□□□□□ -2.1
Vps54Q5SPW0 Gm24225-201ENSMUST00000158825 98 ntBASIC1.91□□□□□ -2.1
Vps54Q5SPW0 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.91□□□□□ -2.1
Vps54Q5SPW0 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.91□□□□□ -2.1
Vps54Q5SPW0 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Vps54Q5SPW0 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.1
Vps54Q5SPW0 Mir767-201ENSMUST00000103256 107 ntBASIC1.9□□□□□ -2.11
Vps54Q5SPW0 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.9□□□□□ -2.11
Vps54Q5SPW0 Gm24851-201ENSMUST00000158028 103 ntBASIC1.9□□□□□ -2.11
Vps54Q5SPW0 Mir8090-201ENSMUST00000185078 136 ntBASIC1.9□□□□□ -2.11
Vps54Q5SPW0 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC1.9□□□□□ -2.11
Vps54Q5SPW0 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC1.9□□□□□ -2.11
Vps54Q5SPW0 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC1.9□□□□□ -2.11
Vps54Q5SPW0 Gm10222-201ENSMUST00000088336 294 ntBASIC1.9□□□□□ -2.11
Vps54Q5SPW0 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Vps54Q5SPW0 Gm25832-201ENSMUST00000104140 130 ntBASIC1.89□□□□□ -2.11
Vps54Q5SPW0 Gm24283-201ENSMUST00000104233 107 ntBASIC1.89□□□□□ -2.11
Vps54Q5SPW0 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.89□□□□□ -2.11
Vps54Q5SPW0 Gm13711-201ENSMUST00000119708 453 ntBASIC1.89□□□□□ -2.11
Vps54Q5SPW0 Gm11388-201ENSMUST00000120908 159 ntBASIC1.89□□□□□ -2.11
Vps54Q5SPW0 Gm22556-201ENSMUST00000157803 100 ntBASIC1.89□□□□□ -2.11
Vps54Q5SPW0 Gm23640-201ENSMUST00000157860 104 ntBASIC1.89□□□□□ -2.11
Vps54Q5SPW0 Gm23289-201ENSMUST00000175615 108 ntBASIC1.89□□□□□ -2.11
Vps54Q5SPW0 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.89□□□□□ -2.11
Vps54Q5SPW0 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.89□□□□□ -2.11
Vps54Q5SPW0 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Vps54Q5SPW0 Gm24966-201ENSMUST00000082443 79 ntBASIC1.89□□□□□ -2.11
Vps54Q5SPW0 Gm22571-201ENSMUST00000082984 70 ntBASIC1.89□□□□□ -2.11
Vps54Q5SPW0 Gm23451-201ENSMUST00000083328 122 ntBASIC1.89□□□□□ -2.11
Vps54Q5SPW0 Gm22984-201ENSMUST00000122751 122 ntBASIC1.88□□□□□ -2.11
Vps54Q5SPW0 Gm23982-201ENSMUST00000157141 106 ntBASIC1.88□□□□□ -2.11
Vps54Q5SPW0 Gm16162-201ENSMUST00000162296 297 ntBASIC1.88□□□□□ -2.11
Vps54Q5SPW0 Mir6388-201ENSMUST00000184417 75 ntBASIC1.88□□□□□ -2.11
Vps54Q5SPW0 Gm29140-201ENSMUST00000190187 476 ntBASIC1.88□□□□□ -2.11
Vps54Q5SPW0 AC125167.1-201ENSMUST00000198698 141 ntBASIC1.88□□□□□ -2.11
Vps54Q5SPW0 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.88□□□□□ -2.11
Vps54Q5SPW0 Gm9795-201ENSMUST00000062156 693 ntBASIC1.88□□□□□ -2.11
Vps54Q5SPW0 Mir875-201ENSMUST00000104698 78 ntBASIC1.87□□□□□ -2.11
Vps54Q5SPW0 Gm25111-201ENSMUST00000116686 147 ntBASIC1.87□□□□□ -2.11
Vps54Q5SPW0 Gm12512-201ENSMUST00000119620 217 ntBASIC1.87□□□□□ -2.11
Vps54Q5SPW0 Gm24440-201ENSMUST00000157236 63 ntBASIC1.87□□□□□ -2.11
Vps54Q5SPW0 Gm25831-201ENSMUST00000158924 163 ntBASIC1.87□□□□□ -2.11
Vps54Q5SPW0 Gm24512-201ENSMUST00000174963 65 ntBASIC1.87□□□□□ -2.11
Vps54Q5SPW0 Gm27747-201ENSMUST00000184707 85 ntBASIC1.87□□□□□ -2.11
Vps54Q5SPW0 Gm45907-201ENSMUST00000213023 193 ntBASIC1.87□□□□□ -2.11
Vps54Q5SPW0 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Vps54Q5SPW0 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Vps54Q5SPW0 Mir293-201ENSMUST00000104841 80 ntBASIC1.86□□□□□ -2.11
Vps54Q5SPW0 Gm23492-201ENSMUST00000116837 115 ntBASIC1.86□□□□□ -2.11
Vps54Q5SPW0 Gm14001-201ENSMUST00000118847 247 ntBASIC1.86□□□□□ -2.11
Vps54Q5SPW0 Gm14922-201ENSMUST00000121131 163 ntBASIC1.86□□□□□ -2.11
Vps54Q5SPW0 Gm23172-201ENSMUST00000157160 124 ntBASIC1.86□□□□□ -2.11
Vps54Q5SPW0 Gm23390-201ENSMUST00000157393 106 ntBASIC1.86□□□□□ -2.11
Vps54Q5SPW0 Gm23558-201ENSMUST00000157823 80 ntBASIC1.86□□□□□ -2.11
Vps54Q5SPW0 Gm27248-201ENSMUST00000184004 166 ntBASIC1.86□□□□□ -2.11
Vps54Q5SPW0 AC161426.1-201ENSMUST00000214137 286 ntBASIC1.86□□□□□ -2.11
Vps54Q5SPW0 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Vps54Q5SPW0 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Vps54Q5SPW0 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.86□□□□□ -2.11
Vps54Q5SPW0 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.85□□□□□ -2.11
Vps54Q5SPW0 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Vps54Q5SPW0 Gm15861-201ENSMUST00000120979 339 ntBASIC1.85□□□□□ -2.11
Vps54Q5SPW0 Gm22118-201ENSMUST00000175593 171 ntBASIC1.85□□□□□ -2.11
Vps54Q5SPW0 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Vps54Q5SPW0 Mir6351-201ENSMUST00000183826 99 ntBASIC1.85□□□□□ -2.11
Vps54Q5SPW0 Gm28912-201ENSMUST00000189001 234 ntBASIC1.85□□□□□ -2.11
Vps54Q5SPW0 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.85□□□□□ -2.11
Vps54Q5SPW0 Gm42774-201ENSMUST00000198854 283 ntBASIC1.85□□□□□ -2.11
Vps54Q5SPW0 Gm44408-201ENSMUST00000200205 66 ntBASIC1.85□□□□□ -2.11
Vps54Q5SPW0 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC1.85□□□□□ -2.11
Vps54Q5SPW0 Gm24805-201ENSMUST00000082931 104 ntBASIC1.85□□□□□ -2.11
Vps54Q5SPW0 Gm24406-201ENSMUST00000083026 128 ntBASIC1.85□□□□□ -2.11
Vps54Q5SPW0 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.85□□□□□ -2.11
Vps54Q5SPW0 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Vps54Q5SPW0 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Vps54Q5SPW0 Gm26135-201ENSMUST00000101993 72 ntBASIC1.84□□□□□ -2.11
Vps54Q5SPW0 Gm25938-201ENSMUST00000104139 166 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 115.6 ms