Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Gm25414-201ENSMUST00000101814 107 ntBASIC0.59□□□□□ -2.31
Trav7d-4Q5R1H9 Gm22656-201ENSMUST00000104199 171 ntBASIC0.59□□□□□ -2.31
Trav7d-4Q5R1H9 Gm11522-201ENSMUST00000120533 176 ntBASIC0.59□□□□□ -2.31
Trav7d-4Q5R1H9 n-R5s63-201ENSMUST00000122756 103 ntBASIC0.59□□□□□ -2.31
Trav7d-4Q5R1H9 Gm24401-201ENSMUST00000157868 91 ntBASIC0.59□□□□□ -2.31
Trav7d-4Q5R1H9 Gm22802-201ENSMUST00000175621 89 ntBASIC0.59□□□□□ -2.31
Trav7d-4Q5R1H9 Gm26914-201ENSMUST00000182262 223 ntBASIC0.59□□□□□ -2.31
Trav7d-4Q5R1H9 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC0.59□□□□□ -2.31
Trav7d-4Q5R1H9 Gm42533-201ENSMUST00000196247 157 ntBASIC0.59□□□□□ -2.31
Trav7d-4Q5R1H9 Mir3087-201ENSMUST00000199405 56 ntBASIC0.59□□□□□ -2.31
Trav7d-4Q5R1H9 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC0.59□□□□□ -2.31
Trav7d-4Q5R1H9 AC157476.1-201ENSMUST00000215555 169 ntBASIC0.59□□□□□ -2.31
Trav7d-4Q5R1H9 AC166358.10-201ENSMUST00000220556 144 ntBASIC0.59□□□□□ -2.31
Trav7d-4Q5R1H9 Gm24311-201ENSMUST00000082570 104 ntBASIC0.59□□□□□ -2.31
Trav7d-4Q5R1H9 Snord32a-201ENSMUST00000083285 83 ntBASIC0.59□□□□□ -2.31
Trav7d-4Q5R1H9 Gm25579-201ENSMUST00000083407 106 ntBASIC0.59□□□□□ -2.31
Trav7d-4Q5R1H9 Mir33-201ENSMUST00000083531 69 ntBASIC0.59□□□□□ -2.31
Trav7d-4Q5R1H9 Gm24163-201ENSMUST00000093660 132 ntBASIC0.59□□□□□ -2.31
Trav7d-4Q5R1H9 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC0.59□□□□□ -2.32
Trav7d-4Q5R1H9 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
Trav7d-4Q5R1H9 Mir695-201ENSMUST00000102261 109 ntBASIC0.58□□□□□ -2.32
Trav7d-4Q5R1H9 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC0.58□□□□□ -2.32
Trav7d-4Q5R1H9 Gm26180-201ENSMUST00000179942 107 ntBASIC0.58□□□□□ -2.32
Trav7d-4Q5R1H9 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
Trav7d-4Q5R1H9 Gm27326-201ENSMUST00000183504 95 ntBASIC0.58□□□□□ -2.32
Trav7d-4Q5R1H9 Gm20257-202ENSMUST00000188643 130 ntBASIC0.58□□□□□ -2.32
Trav7d-4Q5R1H9 Gm9227-201ENSMUST00000194733 566 ntBASIC0.58□□□□□ -2.32
Trav7d-4Q5R1H9 Gm44320-201ENSMUST00000199276 86 ntBASIC0.58□□□□□ -2.32
Trav7d-4Q5R1H9 Gm43898-201ENSMUST00000204456 424 ntBASIC0.58□□□□□ -2.32
Trav7d-4Q5R1H9 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC0.58□□□□□ -2.32
Trav7d-4Q5R1H9 Gm23735-201ENSMUST00000082551 134 ntBASIC0.58□□□□□ -2.32
Trav7d-4Q5R1H9 Gm22704-201ENSMUST00000083027 137 ntBASIC0.58□□□□□ -2.32
Trav7d-4Q5R1H9 Gm26164-201ENSMUST00000083793 104 ntBASIC0.58□□□□□ -2.32
Trav7d-4Q5R1H9 Gm24523-201ENSMUST00000083965 132 ntBASIC0.58□□□□□ -2.32
Trav7d-4Q5R1H9 AC164297.1-201ENSMUST00000224484 1561 ntBASIC0.57□□□□□ -2.32
Trav7d-4Q5R1H9 Gm26338-201ENSMUST00000102372 110 ntBASIC0.57□□□□□ -2.32
Trav7d-4Q5R1H9 Gm11859-201ENSMUST00000118099 455 ntBASIC0.57□□□□□ -2.32
Trav7d-4Q5R1H9 Gm12433-201ENSMUST00000119659 255 ntBASIC0.57□□□□□ -2.32
Trav7d-4Q5R1H9 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC0.57□□□□□ -2.32
Trav7d-4Q5R1H9 Gm14846-201ENSMUST00000121868 216 ntBASIC0.57□□□□□ -2.32
Trav7d-4Q5R1H9 Gm25434-201ENSMUST00000158278 167 ntBASIC0.57□□□□□ -2.32
Trav7d-4Q5R1H9 Gm20386-201ENSMUST00000174010 132 ntBASIC0.57□□□□□ -2.32
Trav7d-4Q5R1H9 Gm20630-201ENSMUST00000177387 551 ntBASIC0.57□□□□□ -2.32
Trav7d-4Q5R1H9 Mir7665-201ENSMUST00000184907 63 ntBASIC0.57□□□□□ -2.32
Trav7d-4Q5R1H9 Gm18291-201ENSMUST00000190791 301 ntBASIC0.57□□□□□ -2.32
Trav7d-4Q5R1H9 Gm38113-201ENSMUST00000193704 201 ntBASIC0.57□□□□□ -2.32
Trav7d-4Q5R1H9 Gm44921-201ENSMUST00000205290 301 ntBASIC0.57□□□□□ -2.32
Trav7d-4Q5R1H9 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.57□□□□□ -2.32
Trav7d-4Q5R1H9 AC126554.1-201ENSMUST00000222161 271 ntBASIC0.57□□□□□ -2.32
Trav7d-4Q5R1H9 AC163646.2-201ENSMUST00000227962 141 ntBASIC0.57□□□□□ -2.32
Trav7d-4Q5R1H9 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
Trav7d-4Q5R1H9 Gm23329-201ENSMUST00000157415 108 ntBASIC0.56□□□□□ -2.32
Trav7d-4Q5R1H9 Gm24154-201ENSMUST00000175261 130 ntBASIC0.56□□□□□ -2.32
Trav7d-4Q5R1H9 Gm18213-201ENSMUST00000207850 178 ntBASIC0.56□□□□□ -2.32
Trav7d-4Q5R1H9 Gm8125-201ENSMUST00000216602 738 ntBASIC0.56□□□□□ -2.32
Trav7d-4Q5R1H9 Gm24037-201ENSMUST00000082871 180 ntBASIC0.56□□□□□ -2.32
Trav7d-4Q5R1H9 Mir490-201ENSMUST00000093567 84 ntBASIC0.56□□□□□ -2.32
Trav7d-4Q5R1H9 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
Trav7d-4Q5R1H9 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC0.55□□□□□ -2.32
Trav7d-4Q5R1H9 Gm17132-201ENSMUST00000109542 1158 ntBASIC0.55□□□□□ -2.32
Trav7d-4Q5R1H9 Gm24942-201ENSMUST00000158328 114 ntBASIC0.55□□□□□ -2.32
Trav7d-4Q5R1H9 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC0.55□□□□□ -2.32
Trav7d-4Q5R1H9 Gm23660-201ENSMUST00000178362 79 ntBASIC0.55□□□□□ -2.32
Trav7d-4Q5R1H9 Gm23267-201ENSMUST00000178490 132 ntBASIC0.55□□□□□ -2.32
Trav7d-4Q5R1H9 Gm24088-201ENSMUST00000179100 79 ntBASIC0.55□□□□□ -2.32
Trav7d-4Q5R1H9 Gm23191-201ENSMUST00000179147 107 ntBASIC0.55□□□□□ -2.32
Trav7d-4Q5R1H9 Gm29229-201ENSMUST00000188874 323 ntBASIC0.55□□□□□ -2.32
Trav7d-4Q5R1H9 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC0.55□□□□□ -2.32
Trav7d-4Q5R1H9 Mir7118-201ENSMUST00000197760 61 ntBASIC0.55□□□□□ -2.32
Trav7d-4Q5R1H9 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.55□□□□□ -2.32
Trav7d-4Q5R1H9 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.55□□□□□ -2.32
Trav7d-4Q5R1H9 Gm46993-201ENSMUST00000220708 259 ntBASIC0.55□□□□□ -2.32
Trav7d-4Q5R1H9 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
Trav7d-4Q5R1H9 Gm24150-201ENSMUST00000082759 104 ntBASIC0.55□□□□□ -2.32
Trav7d-4Q5R1H9 Gm23721-201ENSMUST00000083005 107 ntBASIC0.55□□□□□ -2.32
Trav7d-4Q5R1H9 Mir27b-201ENSMUST00000083541 73 ntBASIC0.55□□□□□ -2.32
Trav7d-4Q5R1H9 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC0.55□□□□□ -2.32
Trav7d-4Q5R1H9 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.55□□□□□ -2.32
Trav7d-4Q5R1H9 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
Trav7d-4Q5R1H9 Gm25909-201ENSMUST00000157619 121 ntBASIC0.54□□□□□ -2.32
Trav7d-4Q5R1H9 Gm24853-201ENSMUST00000158026 121 ntBASIC0.54□□□□□ -2.32
Trav7d-4Q5R1H9 Gm23996-201ENSMUST00000158062 131 ntBASIC0.54□□□□□ -2.32
Trav7d-4Q5R1H9 Gm25284-201ENSMUST00000180345 141 ntBASIC0.54□□□□□ -2.32
Trav7d-4Q5R1H9 Gm29490-201ENSMUST00000190923 342 ntBASIC0.54□□□□□ -2.32
Trav7d-4Q5R1H9 Gm43911-201ENSMUST00000203097 76 ntBASIC0.54□□□□□ -2.32
Trav7d-4Q5R1H9 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC0.54□□□□□ -2.32
Trav7d-4Q5R1H9 CT033781.2-201ENSMUST00000221113 153 ntBASIC0.54□□□□□ -2.32
Trav7d-4Q5R1H9 AC159885.1-201ENSMUST00000222221 199 ntBASIC0.54□□□□□ -2.32
Trav7d-4Q5R1H9 Mir362-201ENSMUST00000093592 65 ntBASIC0.54□□□□□ -2.32
Trav7d-4Q5R1H9 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
Trav7d-4Q5R1H9 Gm26135-201ENSMUST00000101993 72 ntBASIC0.53□□□□□ -2.32
Trav7d-4Q5R1H9 Gm15379-201ENSMUST00000121224 648 ntBASIC0.53□□□□□ -2.32
Trav7d-4Q5R1H9 Gm22199-201ENSMUST00000122660 126 ntBASIC0.53□□□□□ -2.32
Trav7d-4Q5R1H9 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
Trav7d-4Q5R1H9 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.53□□□□□ -2.32
Trav7d-4Q5R1H9 Gm23967-201ENSMUST00000175062 78 ntBASIC0.53□□□□□ -2.32
Trav7d-4Q5R1H9 Snord50b-201ENSMUST00000178497 72 ntBASIC0.53□□□□□ -2.32
Trav7d-4Q5R1H9 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC0.53□□□□□ -2.32
Trav7d-4Q5R1H9 Gm25697-201ENSMUST00000082902 98 ntBASIC0.53□□□□□ -2.32
Trav7d-4Q5R1H9 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms