Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm29229-201ENSMUST00000188874 323 ntBASIC0.21□□□□□ -2.38
Trav5d-4Q5R1F6 AC125167.1-201ENSMUST00000198698 141 ntBASIC0.21□□□□□ -2.38
Trav5d-4Q5R1F6 AC117656.1-201ENSMUST00000225826 339 ntBASIC0.21□□□□□ -2.38
Trav5d-4Q5R1F6 Gm23731-201ENSMUST00000083749 107 ntBASIC0.21□□□□□ -2.38
Trav5d-4Q5R1F6 Gm24476-201ENSMUST00000157437 131 ntBASIC0.2□□□□□ -2.38
Trav5d-4Q5R1F6 Gm23557-201ENSMUST00000157820 138 ntBASIC0.2□□□□□ -2.38
Trav5d-4Q5R1F6 Snord116l12-201ENSMUST00000179816 94 ntBASIC0.2□□□□□ -2.38
Trav5d-4Q5R1F6 Gm27817-201ENSMUST00000184302 233 ntBASIC0.2□□□□□ -2.38
Trav5d-4Q5R1F6 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
Trav5d-4Q5R1F6 Gm43220-201ENSMUST00000199299 282 ntBASIC0.2□□□□□ -2.38
Trav5d-4Q5R1F6 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
Trav5d-4Q5R1F6 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
Trav5d-4Q5R1F6 Mir710-201ENSMUST00000102088 110 ntBASIC0.19□□□□□ -2.38
Trav5d-4Q5R1F6 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
Trav5d-4Q5R1F6 Gm22983-201ENSMUST00000158308 104 ntBASIC0.19□□□□□ -2.38
Trav5d-4Q5R1F6 Gm25121-201ENSMUST00000179846 79 ntBASIC0.19□□□□□ -2.38
Trav5d-4Q5R1F6 Gm27365-201ENSMUST00000184041 177 ntBASIC0.19□□□□□ -2.38
Trav5d-4Q5R1F6 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC0.19□□□□□ -2.38
Trav5d-4Q5R1F6 Gm43810-201ENSMUST00000201018 232 ntBASIC0.19□□□□□ -2.38
Trav5d-4Q5R1F6 Gm29817-201ENSMUST00000210098 172 ntBASIC0.19□□□□□ -2.38
Trav5d-4Q5R1F6 Gm14296-202ENSMUST00000108931 750 ntBASIC0.18□□□□□ -2.38
Trav5d-4Q5R1F6 Gm14946-201ENSMUST00000119859 296 ntBASIC0.18□□□□□ -2.38
Trav5d-4Q5R1F6 Gm24191-201ENSMUST00000157977 122 ntBASIC0.18□□□□□ -2.38
Trav5d-4Q5R1F6 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC0.18□□□□□ -2.38
Trav5d-4Q5R1F6 Gm21894-201ENSMUST00000179631 546 ntBASIC0.18□□□□□ -2.38
Trav5d-4Q5R1F6 Gm27717-201ENSMUST00000183933 151 ntBASIC0.18□□□□□ -2.38
Trav5d-4Q5R1F6 Gm20923-201ENSMUST00000190009 319 ntBASIC0.18□□□□□ -2.38
Trav5d-4Q5R1F6 Gm21088-201ENSMUST00000190875 316 ntBASIC0.18□□□□□ -2.38
Trav5d-4Q5R1F6 Mir468-201ENSMUST00000197332 78 ntBASIC0.18□□□□□ -2.38
Trav5d-4Q5R1F6 AC153141.1-201ENSMUST00000218636 501 ntBASIC0.18□□□□□ -2.38
Trav5d-4Q5R1F6 Gm45815-201ENSMUST00000220241 146 ntBASIC0.18□□□□□ -2.38
Trav5d-4Q5R1F6 CT033781.2-201ENSMUST00000221113 153 ntBASIC0.18□□□□□ -2.38
Trav5d-4Q5R1F6 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.18□□□□□ -2.38
Trav5d-4Q5R1F6 Snord68-201ENSMUST00000082516 86 ntBASIC0.18□□□□□ -2.38
Trav5d-4Q5R1F6 Gm26066-201ENSMUST00000083385 109 ntBASIC0.18□□□□□ -2.38
Trav5d-4Q5R1F6 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
Trav5d-4Q5R1F6 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
Trav5d-4Q5R1F6 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.17□□□□□ -2.38
Trav5d-4Q5R1F6 Mir872-201ENSMUST00000104728 81 ntBASIC0.17□□□□□ -2.38
Trav5d-4Q5R1F6 Gm12143-201ENSMUST00000119666 332 ntBASIC0.17□□□□□ -2.38
Trav5d-4Q5R1F6 Gm25783-201ENSMUST00000122525 190 ntBASIC0.17□□□□□ -2.38
Trav5d-4Q5R1F6 Gm24198-201ENSMUST00000157812 108 ntBASIC0.17□□□□□ -2.38
Trav5d-4Q5R1F6 Gm24277-201ENSMUST00000158661 104 ntBASIC0.17□□□□□ -2.38
Trav5d-4Q5R1F6 Gm25643-201ENSMUST00000158874 103 ntBASIC0.17□□□□□ -2.38
Trav5d-4Q5R1F6 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC0.17□□□□□ -2.38
Trav5d-4Q5R1F6 Gm28926-201ENSMUST00000191063 680 ntBASIC0.17□□□□□ -2.38
Trav5d-4Q5R1F6 Gm37641-201ENSMUST00000193837 239 ntBASIC0.17□□□□□ -2.38
Trav5d-4Q5R1F6 Gm33654-201ENSMUST00000221704 215 ntBASIC0.17□□□□□ -2.38
Trav5d-4Q5R1F6 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
Trav5d-4Q5R1F6 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC0.16□□□□□ -2.38
Trav5d-4Q5R1F6 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
Trav5d-4Q5R1F6 Gm24517-201ENSMUST00000122560 107 ntBASIC0.16□□□□□ -2.38
Trav5d-4Q5R1F6 Gm25968-201ENSMUST00000157167 100 ntBASIC0.16□□□□□ -2.38
Trav5d-4Q5R1F6 Gm23996-201ENSMUST00000158062 131 ntBASIC0.16□□□□□ -2.38
Trav5d-4Q5R1F6 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC0.16□□□□□ -2.38
Trav5d-4Q5R1F6 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC0.16□□□□□ -2.38
Trav5d-4Q5R1F6 AC164629.1-201ENSMUST00000220250 1113 ntBASIC0.16□□□□□ -2.38
Trav5d-4Q5R1F6 Mir490-201ENSMUST00000093567 84 ntBASIC0.16□□□□□ -2.38
Trav5d-4Q5R1F6 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC0.15□□□□□ -2.39
Trav5d-4Q5R1F6 Gm11254-201ENSMUST00000122368 653 ntBASIC0.15□□□□□ -2.39
Trav5d-4Q5R1F6 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.15□□□□□ -2.39
Trav5d-4Q5R1F6 Mir6365-201ENSMUST00000183990 101 ntBASIC0.15□□□□□ -2.39
Trav5d-4Q5R1F6 Gm44211-201ENSMUST00000204867 145 ntBASIC0.15□□□□□ -2.39
Trav5d-4Q5R1F6 Gm44923-201ENSMUST00000206673 85 ntBASIC0.15□□□□□ -2.39
Trav5d-4Q5R1F6 AC157476.1-201ENSMUST00000215555 169 ntBASIC0.15□□□□□ -2.39
Trav5d-4Q5R1F6 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC0.15□□□□□ -2.39
Trav5d-4Q5R1F6 AC154636.2-201ENSMUST00000222538 161 ntBASIC0.15□□□□□ -2.39
Trav5d-4Q5R1F6 AC104832.1-201ENSMUST00000222938 550 ntBASIC0.15□□□□□ -2.39
Trav5d-4Q5R1F6 Gm25404-201ENSMUST00000082970 107 ntBASIC0.15□□□□□ -2.39
Trav5d-4Q5R1F6 Mir224-201ENSMUST00000083608 82 ntBASIC0.15□□□□□ -2.39
Trav5d-4Q5R1F6 AC133079.1-201ENSMUST00000220943 1881 ntBASIC0.14□□□□□ -2.39
Trav5d-4Q5R1F6 Gm22733-201ENSMUST00000158094 91 ntBASIC0.14□□□□□ -2.39
Trav5d-4Q5R1F6 Gm27475-201ENSMUST00000183420 61 ntBASIC0.14□□□□□ -2.39
Trav5d-4Q5R1F6 Mir7077-201ENSMUST00000183991 57 ntBASIC0.14□□□□□ -2.39
Trav5d-4Q5R1F6 Mir7065-201ENSMUST00000185110 61 ntBASIC0.14□□□□□ -2.39
Trav5d-4Q5R1F6 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC0.14□□□□□ -2.39
Trav5d-4Q5R1F6 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC0.14□□□□□ -2.39
Trav5d-4Q5R1F6 Gm43513-201ENSMUST00000199779 1076 ntBASIC0.14□□□□□ -2.39
Trav5d-4Q5R1F6 AC192616.3-201ENSMUST00000220797 1124 ntBASIC0.14□□□□□ -2.39
Trav5d-4Q5R1F6 AC164297.3-201ENSMUST00000224238 94 ntBASIC0.14□□□□□ -2.39
Trav5d-4Q5R1F6 AC100209.2-201ENSMUST00000224461 451 ntBASIC0.14□□□□□ -2.39
Trav5d-4Q5R1F6 Gm22578-201ENSMUST00000083730 107 ntBASIC0.14□□□□□ -2.39
Trav5d-4Q5R1F6 Snord38a-201ENSMUST00000083746 71 ntBASIC0.14□□□□□ -2.39
Trav5d-4Q5R1F6 Gm24163-201ENSMUST00000093660 132 ntBASIC0.14□□□□□ -2.39
Trav5d-4Q5R1F6 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC0.13□□□□□ -2.39
Trav5d-4Q5R1F6 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
Trav5d-4Q5R1F6 Gm37128-201ENSMUST00000192599 232 ntBASIC0.13□□□□□ -2.39
Trav5d-4Q5R1F6 Gm36953-201ENSMUST00000195295 268 ntBASIC0.13□□□□□ -2.39
Trav5d-4Q5R1F6 Gm30155-201ENSMUST00000223458 339 ntBASIC0.13□□□□□ -2.39
Trav5d-4Q5R1F6 Gm25697-201ENSMUST00000082902 98 ntBASIC0.13□□□□□ -2.39
Trav5d-4Q5R1F6 Gm10033-201ENSMUST00000072427 1813 ntBASIC0.13□□□□□ -2.39
Trav5d-4Q5R1F6 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
Trav5d-4Q5R1F6 Gm12837-201ENSMUST00000120131 373 ntBASIC0.12□□□□□ -2.39
Trav5d-4Q5R1F6 Gm22914-201ENSMUST00000175195 77 ntBASIC0.12□□□□□ -2.39
Trav5d-4Q5R1F6 Gm25633-201ENSMUST00000178565 107 ntBASIC0.12□□□□□ -2.39
Trav5d-4Q5R1F6 Gm17067-202ENSMUST00000180131 123 ntBASIC0.12□□□□□ -2.39
Trav5d-4Q5R1F6 Gm28992-201ENSMUST00000190534 139 ntBASIC0.12□□□□□ -2.39
Trav5d-4Q5R1F6 Mir219b-201ENSMUST00000198317 65 ntBASIC0.12□□□□□ -2.39
Trav5d-4Q5R1F6 Gm44488-201ENSMUST00000199467 119 ntBASIC0.12□□□□□ -2.39
Trav5d-4Q5R1F6 AC159297.2-201ENSMUST00000219567 1075 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 76,532 protein–RNA pairs in 104.4 ms