Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Gm26074-201ENSMUST00000104063 129 ntBASIC0.71□□□□□ -2.3
Col27a1Q5QNQ9 Gm22656-201ENSMUST00000104199 171 ntBASIC0.71□□□□□ -2.3
Col27a1Q5QNQ9 Gm14980-201ENSMUST00000121247 736 ntBASIC0.71□□□□□ -2.3
Col27a1Q5QNQ9 Gm23170-201ENSMUST00000157158 106 ntBASIC0.71□□□□□ -2.3
Col27a1Q5QNQ9 Gm24808-201ENSMUST00000157993 118 ntBASIC0.71□□□□□ -2.3
Col27a1Q5QNQ9 Gm24618-201ENSMUST00000177718 94 ntBASIC0.71□□□□□ -2.3
Col27a1Q5QNQ9 Gm23953-201ENSMUST00000178214 94 ntBASIC0.71□□□□□ -2.3
Col27a1Q5QNQ9 Gm26332-201ENSMUST00000179813 94 ntBASIC0.71□□□□□ -2.3
Col27a1Q5QNQ9 Gm22863-201ENSMUST00000180265 94 ntBASIC0.71□□□□□ -2.3
Col27a1Q5QNQ9 Gm29613-201ENSMUST00000185846 313 ntBASIC0.71□□□□□ -2.3
Col27a1Q5QNQ9 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC0.71□□□□□ -2.3
Col27a1Q5QNQ9 Gm29544-201ENSMUST00000188860 313 ntBASIC0.71□□□□□ -2.3
Col27a1Q5QNQ9 Gm28808-201ENSMUST00000190978 313 ntBASIC0.71□□□□□ -2.3
Col27a1Q5QNQ9 Gm37997-201ENSMUST00000193515 267 ntBASIC0.71□□□□□ -2.3
Col27a1Q5QNQ9 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC0.71□□□□□ -2.3
Col27a1Q5QNQ9 AL772265.1-201ENSMUST00000214379 305 ntBASIC0.71□□□□□ -2.3
Col27a1Q5QNQ9 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
Col27a1Q5QNQ9 Gm24588-201ENSMUST00000116696 83 ntBASIC0.71□□□□□ -2.3
Col27a1Q5QNQ9 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC0.71□□□□□ -2.3
Col27a1Q5QNQ9 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
Col27a1Q5QNQ9 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.71□□□□□ -2.3
Col27a1Q5QNQ9 Gm23419-201ENSMUST00000175523 84 ntBASIC0.71□□□□□ -2.3
Col27a1Q5QNQ9 Gm24487-201ENSMUST00000178017 63 ntBASIC0.71□□□□□ -2.3
Col27a1Q5QNQ9 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC0.71□□□□□ -2.3
Col27a1Q5QNQ9 Gm28257-201ENSMUST00000185244 463 ntBASIC0.71□□□□□ -2.3
Col27a1Q5QNQ9 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC0.71□□□□□ -2.3
Col27a1Q5QNQ9 Gm28912-201ENSMUST00000189001 234 ntBASIC0.71□□□□□ -2.3
Col27a1Q5QNQ9 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC0.71□□□□□ -2.3
Col27a1Q5QNQ9 AC125020.2-201ENSMUST00000218894 348 ntBASIC0.71□□□□□ -2.3
Col27a1Q5QNQ9 Gm25579-201ENSMUST00000083407 106 ntBASIC0.71□□□□□ -2.3
Col27a1Q5QNQ9 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC0.71□□□□□ -2.3
Col27a1Q5QNQ9 Gm24282-201ENSMUST00000104232 66 ntBASIC0.7□□□□□ -2.3
Col27a1Q5QNQ9 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC0.7□□□□□ -2.3
Col27a1Q5QNQ9 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC0.7□□□□□ -2.3
Col27a1Q5QNQ9 Gm17132-201ENSMUST00000109542 1158 ntBASIC0.7□□□□□ -2.3
Col27a1Q5QNQ9 Gm25909-201ENSMUST00000157619 121 ntBASIC0.7□□□□□ -2.3
Col27a1Q5QNQ9 Gm24853-201ENSMUST00000158026 121 ntBASIC0.7□□□□□ -2.3
Col27a1Q5QNQ9 Gm25491-201ENSMUST00000158733 308 ntBASIC0.7□□□□□ -2.3
Col27a1Q5QNQ9 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC0.7□□□□□ -2.3
Col27a1Q5QNQ9 Gm22308-201ENSMUST00000177609 107 ntBASIC0.7□□□□□ -2.3
Col27a1Q5QNQ9 Gm27793-201ENSMUST00000183405 76 ntBASIC0.7□□□□□ -2.3
Col27a1Q5QNQ9 Gm29661-201ENSMUST00000186781 315 ntBASIC0.7□□□□□ -2.3
Col27a1Q5QNQ9 Gm29308-201ENSMUST00000188863 315 ntBASIC0.7□□□□□ -2.3
Col27a1Q5QNQ9 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC0.7□□□□□ -2.3
Col27a1Q5QNQ9 CT025630.1-201ENSMUST00000227901 172 ntBASIC0.7□□□□□ -2.3
Col27a1Q5QNQ9 Snord1a-201ENSMUST00000083160 74 ntBASIC0.7□□□□□ -2.3
Col27a1Q5QNQ9 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC0.7□□□□□ -2.3
Col27a1Q5QNQ9 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
Col27a1Q5QNQ9 Gm11859-201ENSMUST00000118099 455 ntBASIC0.69□□□□□ -2.3
Col27a1Q5QNQ9 Gm14293-201ENSMUST00000118528 577 ntBASIC0.69□□□□□ -2.3
Col27a1Q5QNQ9 Gm22985-201ENSMUST00000122754 116 ntBASIC0.69□□□□□ -2.3
Col27a1Q5QNQ9 Gm22435-201ENSMUST00000158552 128 ntBASIC0.69□□□□□ -2.3
Col27a1Q5QNQ9 Igkv17-134-201ENSMUST00000168310 348 ntBASIC0.69□□□□□ -2.3
Col27a1Q5QNQ9 Gm23660-201ENSMUST00000178362 79 ntBASIC0.69□□□□□ -2.3
Col27a1Q5QNQ9 Gm24088-201ENSMUST00000179100 79 ntBASIC0.69□□□□□ -2.3
Col27a1Q5QNQ9 Gm25450-201ENSMUST00000179144 107 ntBASIC0.69□□□□□ -2.3
Col27a1Q5QNQ9 Gm34139-201ENSMUST00000196166 294 ntBASIC0.69□□□□□ -2.3
Col27a1Q5QNQ9 Gm24356-201ENSMUST00000082859 106 ntBASIC0.69□□□□□ -2.3
Col27a1Q5QNQ9 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
Col27a1Q5QNQ9 Gm24401-201ENSMUST00000157868 91 ntBASIC0.68□□□□□ -2.3
Col27a1Q5QNQ9 Gm27957-201ENSMUST00000184054 127 ntBASIC0.68□□□□□ -2.3
Col27a1Q5QNQ9 Gm5001-201ENSMUST00000204361 331 ntBASIC0.68□□□□□ -2.3
Col27a1Q5QNQ9 AC116589.1-201ENSMUST00000220634 327 ntBASIC0.68□□□□□ -2.3
Col27a1Q5QNQ9 AC123709.1-201ENSMUST00000224848 345 ntBASIC0.68□□□□□ -2.3
Col27a1Q5QNQ9 Gm23614-201ENSMUST00000082598 107 ntBASIC0.68□□□□□ -2.3
Col27a1Q5QNQ9 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
Col27a1Q5QNQ9 Gm23907-201ENSMUST00000104595 189 ntBASIC0.68□□□□□ -2.3
Col27a1Q5QNQ9 Gm14803-201ENSMUST00000117163 361 ntBASIC0.68□□□□□ -2.3
Col27a1Q5QNQ9 Gm14269-201ENSMUST00000120455 306 ntBASIC0.68□□□□□ -2.3
Col27a1Q5QNQ9 Gm25805-201ENSMUST00000122788 108 ntBASIC0.68□□□□□ -2.3
Col27a1Q5QNQ9 Gm24777-201ENSMUST00000157644 107 ntBASIC0.68□□□□□ -2.3
Col27a1Q5QNQ9 Gm20462-201ENSMUST00000172623 408 ntBASIC0.68□□□□□ -2.3
Col27a1Q5QNQ9 Mir7675-201ENSMUST00000184262 58 ntBASIC0.68□□□□□ -2.3
Col27a1Q5QNQ9 Gm28995-201ENSMUST00000186625 261 ntBASIC0.68□□□□□ -2.3
Col27a1Q5QNQ9 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC0.68□□□□□ -2.3
Col27a1Q5QNQ9 Gm44726-201ENSMUST00000203427 217 ntBASIC0.68□□□□□ -2.3
Col27a1Q5QNQ9 AC120394.1-201ENSMUST00000217153 351 ntBASIC0.68□□□□□ -2.3
Col27a1Q5QNQ9 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC0.68□□□□□ -2.3
Col27a1Q5QNQ9 Gm25789-201ENSMUST00000083294 76 ntBASIC0.68□□□□□ -2.3
Col27a1Q5QNQ9 Gm26107-201ENSMUST00000083972 107 ntBASIC0.68□□□□□ -2.3
Col27a1Q5QNQ9 Defb44-ps-201ENSMUST00000126871 219 ntBASIC0.67□□□□□ -2.3
Col27a1Q5QNQ9 Gm16358-201ENSMUST00000146046 210 ntBASIC0.67□□□□□ -2.3
Col27a1Q5QNQ9 Gm22791-201ENSMUST00000157232 145 ntBASIC0.67□□□□□ -2.3
Col27a1Q5QNQ9 Gm25054-201ENSMUST00000157370 97 ntBASIC0.67□□□□□ -2.3
Col27a1Q5QNQ9 Mir1967-201ENSMUST00000157789 82 ntBASIC0.67□□□□□ -2.3
Col27a1Q5QNQ9 Gm23994-201ENSMUST00000158059 88 ntBASIC0.67□□□□□ -2.3
Col27a1Q5QNQ9 Gm27236-201ENSMUST00000184147 442 ntBASIC0.67□□□□□ -2.3
Col27a1Q5QNQ9 Gm43250-201ENSMUST00000196536 273 ntBASIC0.67□□□□□ -2.3
Col27a1Q5QNQ9 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
Col27a1Q5QNQ9 Mir133a-1-201ENSMUST00000083465 68 ntBASIC0.67□□□□□ -2.3
Col27a1Q5QNQ9 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
Col27a1Q5QNQ9 Gm23142-201ENSMUST00000101848 105 ntBASIC0.66□□□□□ -2.3
Col27a1Q5QNQ9 Gm26240-201ENSMUST00000101893 105 ntBASIC0.66□□□□□ -2.3
Col27a1Q5QNQ9 Gm22785-201ENSMUST00000104087 132 ntBASIC0.66□□□□□ -2.3
Col27a1Q5QNQ9 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC0.66□□□□□ -2.3
Col27a1Q5QNQ9 Gm23466-201ENSMUST00000157133 106 ntBASIC0.66□□□□□ -2.3
Col27a1Q5QNQ9 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC0.66□□□□□ -2.3
Col27a1Q5QNQ9 Gm19855-201ENSMUST00000210145 249 ntBASIC0.66□□□□□ -2.3
Col27a1Q5QNQ9 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC0.66□□□□□ -2.3
Col27a1Q5QNQ9 AC163033.1-201ENSMUST00000218608 157 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms