Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Gm22556-201ENSMUST00000157803 100 ntBASIC1.31□□□□□ -2.2
Usp28Q5I043 Gm23759-201ENSMUST00000158351 268 ntBASIC1.31□□□□□ -2.2
Usp28Q5I043 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC1.31□□□□□ -2.2
Usp28Q5I043 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC1.31□□□□□ -2.2
Usp28Q5I043 Gm7958-201ENSMUST00000178255 468 ntBASIC1.31□□□□□ -2.2
Usp28Q5I043 Gm7950-201ENSMUST00000179633 468 ntBASIC1.31□□□□□ -2.2
Usp28Q5I043 Gm26914-201ENSMUST00000182262 223 ntBASIC1.31□□□□□ -2.2
Usp28Q5I043 Gm27419-201ENSMUST00000184576 109 ntBASIC1.31□□□□□ -2.2
Usp28Q5I043 Gm28912-201ENSMUST00000189001 234 ntBASIC1.31□□□□□ -2.2
Usp28Q5I043 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
Usp28Q5I043 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
Usp28Q5I043 Gm44468-201ENSMUST00000199516 105 ntBASIC1.31□□□□□ -2.2
Usp28Q5I043 Gm44408-201ENSMUST00000200205 66 ntBASIC1.31□□□□□ -2.2
Usp28Q5I043 AC145736.2-201ENSMUST00000216305 365 ntBASIC1.31□□□□□ -2.2
Usp28Q5I043 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC1.31□□□□□ -2.2
Usp28Q5I043 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Usp28Q5I043 Gm24316-201ENSMUST00000083041 107 ntBASIC1.31□□□□□ -2.2
Usp28Q5I043 Gm22294-201ENSMUST00000083308 104 ntBASIC1.31□□□□□ -2.2
Usp28Q5I043 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.31□□□□□ -2.2
Usp28Q5I043 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
Usp28Q5I043 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.3□□□□□ -2.2
Usp28Q5I043 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
Usp28Q5I043 Gm22935-201ENSMUST00000103960 104 ntBASIC1.3□□□□□ -2.2
Usp28Q5I043 Gm14937-201ENSMUST00000119709 208 ntBASIC1.3□□□□□ -2.2
Usp28Q5I043 Gm23656-201ENSMUST00000122626 112 ntBASIC1.3□□□□□ -2.2
Usp28Q5I043 Gm24510-201ENSMUST00000174965 94 ntBASIC1.3□□□□□ -2.2
Usp28Q5I043 Gm24818-201ENSMUST00000175093 161 ntBASIC1.3□□□□□ -2.2
Usp28Q5I043 Gm28008-201ENSMUST00000184021 186 ntBASIC1.3□□□□□ -2.2
Usp28Q5I043 Mir8090-201ENSMUST00000185078 136 ntBASIC1.3□□□□□ -2.2
Usp28Q5I043 Gm34015-201ENSMUST00000194908 451 ntBASIC1.3□□□□□ -2.2
Usp28Q5I043 AC125167.1-201ENSMUST00000198698 141 ntBASIC1.3□□□□□ -2.2
Usp28Q5I043 Gm23370-201ENSMUST00000199545 130 ntBASIC1.3□□□□□ -2.2
Usp28Q5I043 AC163033.1-201ENSMUST00000218608 157 ntBASIC1.3□□□□□ -2.2
Usp28Q5I043 AC166341.3-201ENSMUST00000221861 114 ntBASIC1.3□□□□□ -2.2
Usp28Q5I043 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Usp28Q5I043 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Usp28Q5I043 Mir301b-201ENSMUST00000102333 97 ntBASIC1.29□□□□□ -2.2
Usp28Q5I043 Gm24116-201ENSMUST00000103975 107 ntBASIC1.29□□□□□ -2.2
Usp28Q5I043 Gm23011-201ENSMUST00000104148 132 ntBASIC1.29□□□□□ -2.2
Usp28Q5I043 Mir669d-2-201ENSMUST00000116854 86 ntBASIC1.29□□□□□ -2.2
Usp28Q5I043 Gm22027-201ENSMUST00000122737 127 ntBASIC1.29□□□□□ -2.2
Usp28Q5I043 Gm23390-201ENSMUST00000157393 106 ntBASIC1.29□□□□□ -2.2
Usp28Q5I043 Gm17919-201ENSMUST00000173344 312 ntBASIC1.29□□□□□ -2.2
Usp28Q5I043 Mir5624-201ENSMUST00000176635 61 ntBASIC1.29□□□□□ -2.2
Usp28Q5I043 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.29□□□□□ -2.2
Usp28Q5I043 Gm45543-201ENSMUST00000209327 88 ntBASIC1.29□□□□□ -2.2
Usp28Q5I043 Gm5010-201ENSMUST00000213131 260 ntBASIC1.29□□□□□ -2.2
Usp28Q5I043 Gm7240-201ENSMUST00000220769 664 ntBASIC1.29□□□□□ -2.2
Usp28Q5I043 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.29□□□□□ -2.2
Usp28Q5I043 AC158981.3-202ENSMUST00000228906 523 ntBASIC1.29□□□□□ -2.2
Usp28Q5I043 Mir221-201ENSMUST00000083488 95 ntBASIC1.29□□□□□ -2.2
Usp28Q5I043 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
Usp28Q5I043 Gm15162-201ENSMUST00000119325 283 ntBASIC1.28□□□□□ -2.2
Usp28Q5I043 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.28□□□□□ -2.2
Usp28Q5I043 Gm13339-201ENSMUST00000120651 510 ntBASIC1.28□□□□□ -2.2
Usp28Q5I043 Gm23230-201ENSMUST00000157298 133 ntBASIC1.28□□□□□ -2.2
Usp28Q5I043 Mir3569-201ENSMUST00000185080 58 ntBASIC1.28□□□□□ -2.2
Usp28Q5I043 Gm29512-201ENSMUST00000185544 315 ntBASIC1.28□□□□□ -2.2
Usp28Q5I043 Gm28110-201ENSMUST00000185782 315 ntBASIC1.28□□□□□ -2.2
Usp28Q5I043 Gm28579-201ENSMUST00000186143 369 ntBASIC1.28□□□□□ -2.2
Usp28Q5I043 Gm29057-201ENSMUST00000186468 315 ntBASIC1.28□□□□□ -2.2
Usp28Q5I043 Gm29661-201ENSMUST00000186781 315 ntBASIC1.28□□□□□ -2.2
Usp28Q5I043 Gm28737-201ENSMUST00000186808 315 ntBASIC1.28□□□□□ -2.2
Usp28Q5I043 Gm29118-201ENSMUST00000186908 315 ntBASIC1.28□□□□□ -2.2
Usp28Q5I043 Gm28433-201ENSMUST00000187085 315 ntBASIC1.28□□□□□ -2.2
Usp28Q5I043 Gm28759-201ENSMUST00000187621 315 ntBASIC1.28□□□□□ -2.2
Usp28Q5I043 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
Usp28Q5I043 Gm28831-201ENSMUST00000187739 315 ntBASIC1.28□□□□□ -2.2
Usp28Q5I043 Gm28200-201ENSMUST00000187778 315 ntBASIC1.28□□□□□ -2.2
Usp28Q5I043 Gm28752-201ENSMUST00000188340 315 ntBASIC1.28□□□□□ -2.2
Usp28Q5I043 Gm29378-201ENSMUST00000188723 315 ntBASIC1.28□□□□□ -2.2
Usp28Q5I043 Gm28569-201ENSMUST00000188748 315 ntBASIC1.28□□□□□ -2.2
Usp28Q5I043 Gm28120-201ENSMUST00000188812 315 ntBASIC1.28□□□□□ -2.2
Usp28Q5I043 Gm28369-201ENSMUST00000188993 315 ntBASIC1.28□□□□□ -2.2
Usp28Q5I043 Gm29037-201ENSMUST00000189092 313 ntBASIC1.28□□□□□ -2.2
Usp28Q5I043 Gm28909-201ENSMUST00000189406 315 ntBASIC1.28□□□□□ -2.2
Usp28Q5I043 Gm28861-201ENSMUST00000189681 315 ntBASIC1.28□□□□□ -2.2
Usp28Q5I043 Gm29180-201ENSMUST00000190003 315 ntBASIC1.28□□□□□ -2.2
Usp28Q5I043 Gm29575-201ENSMUST00000190597 315 ntBASIC1.28□□□□□ -2.2
Usp28Q5I043 Gm29469-201ENSMUST00000191448 315 ntBASIC1.28□□□□□ -2.2
Usp28Q5I043 Gm37693-201ENSMUST00000194562 234 ntBASIC1.28□□□□□ -2.2
Usp28Q5I043 Gm44858-201ENSMUST00000207360 154 ntBASIC1.28□□□□□ -2.2
Usp28Q5I043 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC1.28□□□□□ -2.2
Usp28Q5I043 Gm11606-201ENSMUST00000120706 617 ntBASIC1.27□□□□□ -2.21
Usp28Q5I043 Gm24724-201ENSMUST00000158230 107 ntBASIC1.27□□□□□ -2.21
Usp28Q5I043 Gm24277-201ENSMUST00000158661 104 ntBASIC1.27□□□□□ -2.21
Usp28Q5I043 Gm25936-201ENSMUST00000179952 114 ntBASIC1.27□□□□□ -2.21
Usp28Q5I043 Mir6381-201ENSMUST00000183426 87 ntBASIC1.27□□□□□ -2.21
Usp28Q5I043 Mir6951-201ENSMUST00000183910 75 ntBASIC1.27□□□□□ -2.21
Usp28Q5I043 Gm19123-201ENSMUST00000190716 651 ntBASIC1.27□□□□□ -2.21
Usp28Q5I043 Gm44320-201ENSMUST00000199276 86 ntBASIC1.27□□□□□ -2.21
Usp28Q5I043 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC1.27□□□□□ -2.21
Usp28Q5I043 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.27□□□□□ -2.21
Usp28Q5I043 AC163295.1-201ENSMUST00000227840 314 ntBASIC1.27□□□□□ -2.21
Usp28Q5I043 Gm25079-201ENSMUST00000082529 203 ntBASIC1.27□□□□□ -2.21
Usp28Q5I043 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Usp28Q5I043 Gm23987-201ENSMUST00000117039 129 ntBASIC1.26□□□□□ -2.21
Usp28Q5I043 Gm14761-201ENSMUST00000121363 262 ntBASIC1.26□□□□□ -2.21
Usp28Q5I043 Gm22491-201ENSMUST00000157190 102 ntBASIC1.26□□□□□ -2.21
Usp28Q5I043 Gm22434-201ENSMUST00000158549 122 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 159.7 ms