Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC-1.15□□□□□ -2.59
Ccdc88bQ4QRL3 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC-1.15□□□□□ -2.59
Ccdc88bQ4QRL3 Gm24843-201ENSMUST00000158682 76 ntBASIC-1.15□□□□□ -2.59
Ccdc88bQ4QRL3 Gm25249-201ENSMUST00000175471 78 ntBASIC-1.15□□□□□ -2.59
Ccdc88bQ4QRL3 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC-1.15□□□□□ -2.59
Ccdc88bQ4QRL3 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC-1.15□□□□□ -2.59
Ccdc88bQ4QRL3 Gm44419-201ENSMUST00000203338 229 ntBASIC-1.15□□□□□ -2.59
Ccdc88bQ4QRL3 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC-1.15□□□□□ -2.59
Ccdc88bQ4QRL3 Gm14600-201ENSMUST00000121032 630 ntBASIC-1.16□□□□□ -2.59
Ccdc88bQ4QRL3 Defa-ps12-201ENSMUST00000122353 193 ntBASIC-1.16□□□□□ -2.59
Ccdc88bQ4QRL3 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC-1.16□□□□□ -2.59
Ccdc88bQ4QRL3 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC-1.16□□□□□ -2.59
Ccdc88bQ4QRL3 Gm23462-201ENSMUST00000083264 104 ntBASIC-1.16□□□□□ -2.59
Ccdc88bQ4QRL3 Gm11893-201ENSMUST00000117829 491 ntBASIC-1.17□□□□□ -2.6
Ccdc88bQ4QRL3 Gm11794-201ENSMUST00000119446 237 ntBASIC-1.17□□□□□ -2.6
Ccdc88bQ4QRL3 Gm22098-201ENSMUST00000157930 85 ntBASIC-1.17□□□□□ -2.6
Ccdc88bQ4QRL3 Gm18417-201ENSMUST00000176564 648 ntBASIC-1.17□□□□□ -2.6
Ccdc88bQ4QRL3 Gm28661-201ENSMUST00000188231 681 ntBASIC-1.17□□□□□ -2.6
Ccdc88bQ4QRL3 Gm22938-201ENSMUST00000103956 120 ntBASIC-1.18□□□□□ -2.6
Ccdc88bQ4QRL3 Gm23601-201ENSMUST00000157259 131 ntBASIC-1.18□□□□□ -2.6
Ccdc88bQ4QRL3 Gm26355-201ENSMUST00000158220 105 ntBASIC-1.18□□□□□ -2.6
Ccdc88bQ4QRL3 Gm22611-201ENSMUST00000158288 150 ntBASIC-1.18□□□□□ -2.6
Ccdc88bQ4QRL3 Gm29229-201ENSMUST00000188874 323 ntBASIC-1.18□□□□□ -2.6
Ccdc88bQ4QRL3 Gm43487-201ENSMUST00000200331 1031 ntBASIC-1.18□□□□□ -2.6
Ccdc88bQ4QRL3 Gm24460-201ENSMUST00000082731 106 ntBASIC-1.18□□□□□ -2.6
Ccdc88bQ4QRL3 Gm26055-201ENSMUST00000083038 107 ntBASIC-1.18□□□□□ -2.6
Ccdc88bQ4QRL3 Gm24163-201ENSMUST00000093660 132 ntBASIC-1.18□□□□□ -2.6
Ccdc88bQ4QRL3 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC-1.18□□□□□ -2.6
Ccdc88bQ4QRL3 Mir1942-201ENSMUST00000157274 63 ntBASIC-1.18□□□□□ -2.6
Ccdc88bQ4QRL3 Gm22966-201ENSMUST00000157957 129 ntBASIC-1.18□□□□□ -2.6
Ccdc88bQ4QRL3 Gm23473-201ENSMUST00000158883 116 ntBASIC-1.18□□□□□ -2.6
Ccdc88bQ4QRL3 Gm22252-201ENSMUST00000179316 79 ntBASIC-1.18□□□□□ -2.6
Ccdc88bQ4QRL3 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC-1.18□□□□□ -2.6
Ccdc88bQ4QRL3 Gm9472-201ENSMUST00000221625 526 ntBASIC-1.18□□□□□ -2.6
Ccdc88bQ4QRL3 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC-1.19□□□□□ -2.6
Ccdc88bQ4QRL3 Gm26430-201ENSMUST00000178054 107 ntBASIC-1.19□□□□□ -2.6
Ccdc88bQ4QRL3 Gm44311-201ENSMUST00000196448 69 ntBASIC-1.19□□□□□ -2.6
Ccdc88bQ4QRL3 AC156574.2-201ENSMUST00000228023 282 ntBASIC-1.19□□□□□ -2.6
Ccdc88bQ4QRL3 CT030684.2-201ENSMUST00000228946 826 ntBASIC-1.19□□□□□ -2.6
Ccdc88bQ4QRL3 Gm25799-201ENSMUST00000082643 107 ntBASIC-1.19□□□□□ -2.6
Ccdc88bQ4QRL3 Gm24455-201ENSMUST00000083348 131 ntBASIC-1.19□□□□□ -2.6
Ccdc88bQ4QRL3 Gm25431-201ENSMUST00000101978 107 ntBASIC-1.2□□□□□ -2.6
Ccdc88bQ4QRL3 Gm14922-201ENSMUST00000121131 163 ntBASIC-1.2□□□□□ -2.6
Ccdc88bQ4QRL3 Gm22466-201ENSMUST00000175278 69 ntBASIC-1.2□□□□□ -2.6
Ccdc88bQ4QRL3 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC-1.2□□□□□ -2.6
Ccdc88bQ4QRL3 Gm43472-201ENSMUST00000200175 154 ntBASIC-1.2□□□□□ -2.6
Ccdc88bQ4QRL3 CT033781.2-201ENSMUST00000221113 153 ntBASIC-1.2□□□□□ -2.6
Ccdc88bQ4QRL3 AC164304.1-201ENSMUST00000226920 272 ntBASIC-1.2□□□□□ -2.6
Ccdc88bQ4QRL3 Gm25518-201ENSMUST00000083864 107 ntBASIC-1.2□□□□□ -2.6
Ccdc88bQ4QRL3 Gm17377-201ENSMUST00000165184 207 ntBASIC-1.21□□□□□ -2.6
Ccdc88bQ4QRL3 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC-1.21□□□□□ -2.6
Ccdc88bQ4QRL3 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC-1.21□□□□□ -2.6
Ccdc88bQ4QRL3 Mir7j-201ENSMUST00000184427 122 ntBASIC-1.21□□□□□ -2.6
Ccdc88bQ4QRL3 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC-1.21□□□□□ -2.6
Ccdc88bQ4QRL3 Gm28196-201ENSMUST00000187719 640 ntBASIC-1.21□□□□□ -2.6
Ccdc88bQ4QRL3 AC133654.1-201ENSMUST00000228411 672 ntBASIC-1.21□□□□□ -2.6
Ccdc88bQ4QRL3 Gm23442-201ENSMUST00000082919 134 ntBASIC-1.21□□□□□ -2.6
Ccdc88bQ4QRL3 Gm24764-201ENSMUST00000083686 199 ntBASIC-1.21□□□□□ -2.6
Ccdc88bQ4QRL3 Mir669i-201ENSMUST00000117007 127 ntBASIC-1.22□□□□□ -2.6
Ccdc88bQ4QRL3 Gm11219-201ENSMUST00000118565 358 ntBASIC-1.22□□□□□ -2.6
Ccdc88bQ4QRL3 Gm14566-201ENSMUST00000118915 321 ntBASIC-1.22□□□□□ -2.6
Ccdc88bQ4QRL3 Gm22814-201ENSMUST00000157452 104 ntBASIC-1.22□□□□□ -2.6
Ccdc88bQ4QRL3 Gm22263-201ENSMUST00000180060 104 ntBASIC-1.22□□□□□ -2.6
Ccdc88bQ4QRL3 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-1.22□□□□□ -2.6
Ccdc88bQ4QRL3 Gm24142-201ENSMUST00000101960 107 ntBASIC-1.23□□□□□ -2.61
Ccdc88bQ4QRL3 Defa-ps13-201ENSMUST00000120695 204 ntBASIC-1.23□□□□□ -2.61
Ccdc88bQ4QRL3 Gm27944-201ENSMUST00000185155 103 ntBASIC-1.23□□□□□ -2.61
Ccdc88bQ4QRL3 Gm44391-201ENSMUST00000198490 93 ntBASIC-1.23□□□□□ -2.61
Ccdc88bQ4QRL3 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC-1.23□□□□□ -2.61
Ccdc88bQ4QRL3 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC-1.23□□□□□ -2.61
Ccdc88bQ4QRL3 Gm24203-201ENSMUST00000082949 114 ntBASIC-1.23□□□□□ -2.61
Ccdc88bQ4QRL3 Gm26290-201ENSMUST00000158891 145 ntBASIC-1.24□□□□□ -2.61
Ccdc88bQ4QRL3 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC-1.24□□□□□ -2.61
Ccdc88bQ4QRL3 Gm24508-201ENSMUST00000180104 107 ntBASIC-1.24□□□□□ -2.61
Ccdc88bQ4QRL3 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC-1.24□□□□□ -2.61
Ccdc88bQ4QRL3 Gm23792-201ENSMUST00000122557 93 ntBASIC-1.24□□□□□ -2.61
Ccdc88bQ4QRL3 Gm26415-201ENSMUST00000157673 292 ntBASIC-1.24□□□□□ -2.61
Ccdc88bQ4QRL3 Gm24884-201ENSMUST00000158784 119 ntBASIC-1.24□□□□□ -2.61
Ccdc88bQ4QRL3 Gm20689-201ENSMUST00000176033 279 ntBASIC-1.24□□□□□ -2.61
Ccdc88bQ4QRL3 Gm9236-201ENSMUST00000196892 587 ntBASIC-1.24□□□□□ -2.61
Ccdc88bQ4QRL3 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC-1.24□□□□□ -2.61
Ccdc88bQ4QRL3 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC-1.24□□□□□ -2.61
Ccdc88bQ4QRL3 Gm22005-201ENSMUST00000082795 141 ntBASIC-1.24□□□□□ -2.61
Ccdc88bQ4QRL3 Mir208b-201ENSMUST00000104735 77 ntBASIC-1.25□□□□□ -2.61
Ccdc88bQ4QRL3 Mir654-201ENSMUST00000104787 84 ntBASIC-1.25□□□□□ -2.61
Ccdc88bQ4QRL3 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC-1.25□□□□□ -2.61
Ccdc88bQ4QRL3 Gm22767-201ENSMUST00000158365 165 ntBASIC-1.25□□□□□ -2.61
Ccdc88bQ4QRL3 Gm22200-201ENSMUST00000158614 67 ntBASIC-1.25□□□□□ -2.61
Ccdc88bQ4QRL3 Gm37743-201ENSMUST00000194645 376 ntBASIC-1.25□□□□□ -2.61
Ccdc88bQ4QRL3 Gm44487-201ENSMUST00000205145 325 ntBASIC-1.25□□□□□ -2.61
Ccdc88bQ4QRL3 Gm24853-201ENSMUST00000158026 121 ntBASIC-1.26□□□□□ -2.61
Ccdc88bQ4QRL3 Gm24547-201ENSMUST00000158649 149 ntBASIC-1.26□□□□□ -2.61
Ccdc88bQ4QRL3 Gm10177-202ENSMUST00000161698 207 ntBASIC-1.26□□□□□ -2.61
Ccdc88bQ4QRL3 Mir3964-201ENSMUST00000174898 74 ntBASIC-1.26□□□□□ -2.61
Ccdc88bQ4QRL3 Mir3473d-201ENSMUST00000175346 81 ntBASIC-1.26□□□□□ -2.61
Ccdc88bQ4QRL3 Gm25472-201ENSMUST00000175454 78 ntBASIC-1.26□□□□□ -2.61
Ccdc88bQ4QRL3 Gm29352-201ENSMUST00000188054 544 ntBASIC-1.26□□□□□ -2.61
Ccdc88bQ4QRL3 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC-1.26□□□□□ -2.61
Ccdc88bQ4QRL3 Gm46103-201ENSMUST00000217614 341 ntBASIC-1.26□□□□□ -2.61
Ccdc88bQ4QRL3 CT030184.1-201ENSMUST00000222393 416 ntBASIC-1.26□□□□□ -2.61
Retrieved 100 of 76,532 protein–RNA pairs in 131.1 ms