Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.53□□□□□ -2.16
Trafd1Q3UDK1 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.53□□□□□ -2.16
Trafd1Q3UDK1 Gm25831-201ENSMUST00000158924 163 ntBASIC1.53□□□□□ -2.16
Trafd1Q3UDK1 Gm26435-201ENSMUST00000179026 107 ntBASIC1.53□□□□□ -2.16
Trafd1Q3UDK1 Gm29140-201ENSMUST00000190187 476 ntBASIC1.53□□□□□ -2.16
Trafd1Q3UDK1 Gm24615-201ENSMUST00000083268 113 ntBASIC1.53□□□□□ -2.16
Trafd1Q3UDK1 Gm14001-201ENSMUST00000118847 247 ntBASIC1.52□□□□□ -2.17
Trafd1Q3UDK1 Gm22221-201ENSMUST00000157362 103 ntBASIC1.52□□□□□ -2.17
Trafd1Q3UDK1 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC1.52□□□□□ -2.17
Trafd1Q3UDK1 AC115735.2-201ENSMUST00000227135 351 ntBASIC1.52□□□□□ -2.17
Trafd1Q3UDK1 Gm22299-201ENSMUST00000082663 136 ntBASIC1.52□□□□□ -2.17
Trafd1Q3UDK1 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Trafd1Q3UDK1 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.52□□□□□ -2.17
Trafd1Q3UDK1 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.51□□□□□ -2.17
Trafd1Q3UDK1 Gm12143-201ENSMUST00000119666 332 ntBASIC1.51□□□□□ -2.17
Trafd1Q3UDK1 Gm22883-201ENSMUST00000157376 106 ntBASIC1.51□□□□□ -2.17
Trafd1Q3UDK1 Gm22963-201ENSMUST00000157960 91 ntBASIC1.51□□□□□ -2.17
Trafd1Q3UDK1 Gm23221-201ENSMUST00000158118 93 ntBASIC1.51□□□□□ -2.17
Trafd1Q3UDK1 Gm24902-201ENSMUST00000158126 123 ntBASIC1.51□□□□□ -2.17
Trafd1Q3UDK1 Gm23581-201ENSMUST00000158531 63 ntBASIC1.51□□□□□ -2.17
Trafd1Q3UDK1 Gm23967-201ENSMUST00000175062 78 ntBASIC1.51□□□□□ -2.17
Trafd1Q3UDK1 Gm25994-201ENSMUST00000175392 101 ntBASIC1.51□□□□□ -2.17
Trafd1Q3UDK1 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC1.51□□□□□ -2.17
Trafd1Q3UDK1 Gm27521-201ENSMUST00000184022 64 ntBASIC1.51□□□□□ -2.17
Trafd1Q3UDK1 Gm28794-201ENSMUST00000185276 136 ntBASIC1.51□□□□□ -2.17
Trafd1Q3UDK1 Gm28453-203ENSMUST00000187041 189 ntBASIC1.51□□□□□ -2.17
Trafd1Q3UDK1 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.51□□□□□ -2.17
Trafd1Q3UDK1 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC1.51□□□□□ -2.17
Trafd1Q3UDK1 Gm45543-201ENSMUST00000209327 88 ntBASIC1.51□□□□□ -2.17
Trafd1Q3UDK1 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.51□□□□□ -2.17
Trafd1Q3UDK1 Gm24625-201ENSMUST00000082622 130 ntBASIC1.51□□□□□ -2.17
Trafd1Q3UDK1 Gm26493-201ENSMUST00000083155 136 ntBASIC1.51□□□□□ -2.17
Trafd1Q3UDK1 Gm23679-201ENSMUST00000083161 119 ntBASIC1.51□□□□□ -2.17
Trafd1Q3UDK1 Mir151-201ENSMUST00000083678 68 ntBASIC1.51□□□□□ -2.17
Trafd1Q3UDK1 Mir374b-201ENSMUST00000102314 95 ntBASIC1.5□□□□□ -2.17
Trafd1Q3UDK1 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Trafd1Q3UDK1 Gm23766-201ENSMUST00000103894 80 ntBASIC1.5□□□□□ -2.17
Trafd1Q3UDK1 Gm14882-201ENSMUST00000117216 218 ntBASIC1.5□□□□□ -2.17
Trafd1Q3UDK1 Gm11904-201ENSMUST00000120562 248 ntBASIC1.5□□□□□ -2.17
Trafd1Q3UDK1 Gm15115-201ENSMUST00000121145 264 ntBASIC1.5□□□□□ -2.17
Trafd1Q3UDK1 Defb44-ps-201ENSMUST00000126871 219 ntBASIC1.5□□□□□ -2.17
Trafd1Q3UDK1 Mir1949-201ENSMUST00000157434 141 ntBASIC1.5□□□□□ -2.17
Trafd1Q3UDK1 Gm22217-201ENSMUST00000157556 313 ntBASIC1.5□□□□□ -2.17
Trafd1Q3UDK1 Gm23640-201ENSMUST00000157860 104 ntBASIC1.5□□□□□ -2.17
Trafd1Q3UDK1 Gm26405-201ENSMUST00000158495 100 ntBASIC1.5□□□□□ -2.17
Trafd1Q3UDK1 Gm26004-201ENSMUST00000158804 116 ntBASIC1.5□□□□□ -2.17
Trafd1Q3UDK1 Gm16162-201ENSMUST00000162296 297 ntBASIC1.5□□□□□ -2.17
Trafd1Q3UDK1 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC1.5□□□□□ -2.17
Trafd1Q3UDK1 Gm45365-201ENSMUST00000209489 256 ntBASIC1.5□□□□□ -2.17
Trafd1Q3UDK1 Gm45313-201ENSMUST00000210584 178 ntBASIC1.5□□□□□ -2.17
Trafd1Q3UDK1 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.5□□□□□ -2.17
Trafd1Q3UDK1 Mir320-201ENSMUST00000083594 82 ntBASIC1.5□□□□□ -2.17
Trafd1Q3UDK1 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.5□□□□□ -2.17
Trafd1Q3UDK1 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Trafd1Q3UDK1 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Trafd1Q3UDK1 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Trafd1Q3UDK1 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.49□□□□□ -2.17
Trafd1Q3UDK1 Gm24632-201ENSMUST00000122770 323 ntBASIC1.49□□□□□ -2.17
Trafd1Q3UDK1 Gm24222-201ENSMUST00000158834 93 ntBASIC1.49□□□□□ -2.17
Trafd1Q3UDK1 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1.49□□□□□ -2.17
Trafd1Q3UDK1 AC164086.1-201ENSMUST00000221038 289 ntBASIC1.49□□□□□ -2.17
Trafd1Q3UDK1 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.49□□□□□ -2.17
Trafd1Q3UDK1 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.49□□□□□ -2.17
Trafd1Q3UDK1 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Trafd1Q3UDK1 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
Trafd1Q3UDK1 Gm24283-201ENSMUST00000104233 107 ntBASIC1.48□□□□□ -2.17
Trafd1Q3UDK1 Gm14919-201ENSMUST00000120839 390 ntBASIC1.48□□□□□ -2.17
Trafd1Q3UDK1 Gm15379-201ENSMUST00000121224 648 ntBASIC1.48□□□□□ -2.17
Trafd1Q3UDK1 Gm8121-201ENSMUST00000153583 499 ntBASIC1.48□□□□□ -2.17
Trafd1Q3UDK1 Gm23181-201ENSMUST00000158685 110 ntBASIC1.48□□□□□ -2.17
Trafd1Q3UDK1 Gm24225-201ENSMUST00000158825 98 ntBASIC1.48□□□□□ -2.17
Trafd1Q3UDK1 Gm25397-201ENSMUST00000176951 92 ntBASIC1.48□□□□□ -2.17
Trafd1Q3UDK1 Gm23267-201ENSMUST00000178490 132 ntBASIC1.48□□□□□ -2.17
Trafd1Q3UDK1 Mir7241-201ENSMUST00000184532 64 ntBASIC1.48□□□□□ -2.17
Trafd1Q3UDK1 Gm37763-201ENSMUST00000193445 120 ntBASIC1.48□□□□□ -2.17
Trafd1Q3UDK1 Gm44491-201ENSMUST00000196794 96 ntBASIC1.48□□□□□ -2.17
Trafd1Q3UDK1 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.48□□□□□ -2.17
Trafd1Q3UDK1 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.48□□□□□ -2.17
Trafd1Q3UDK1 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.48□□□□□ -2.17
Trafd1Q3UDK1 AC173482.4-201ENSMUST00000225096 348 ntBASIC1.48□□□□□ -2.17
Trafd1Q3UDK1 Mir410-201ENSMUST00000083563 81 ntBASIC1.48□□□□□ -2.17
Trafd1Q3UDK1 Gm23039-201ENSMUST00000083870 161 ntBASIC1.48□□□□□ -2.17
Trafd1Q3UDK1 Gm22984-201ENSMUST00000122751 122 ntBASIC1.47□□□□□ -2.17
Trafd1Q3UDK1 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Trafd1Q3UDK1 Rnu7-201ENSMUST00000158458 62 ntBASIC1.47□□□□□ -2.17
Trafd1Q3UDK1 Gm17113-201ENSMUST00000170118 171 ntBASIC1.47□□□□□ -2.17
Trafd1Q3UDK1 Gm28330-201ENSMUST00000190353 171 ntBASIC1.47□□□□□ -2.17
Trafd1Q3UDK1 Gm42834-201ENSMUST00000196845 256 ntBASIC1.47□□□□□ -2.17
Trafd1Q3UDK1 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Trafd1Q3UDK1 Mir3961-201ENSMUST00000198795 59 ntBASIC1.47□□□□□ -2.17
Trafd1Q3UDK1 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Trafd1Q3UDK1 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
Trafd1Q3UDK1 AC165092.3-201ENSMUST00000223602 282 ntBASIC1.47□□□□□ -2.17
Trafd1Q3UDK1 Gm10092-201ENSMUST00000077110 180 ntBASIC1.47□□□□□ -2.17
Trafd1Q3UDK1 Gm26497-201ENSMUST00000083146 107 ntBASIC1.47□□□□□ -2.17
Trafd1Q3UDK1 Gm23451-201ENSMUST00000083328 122 ntBASIC1.47□□□□□ -2.17
Trafd1Q3UDK1 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Trafd1Q3UDK1 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Trafd1Q3UDK1 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Trafd1Q3UDK1 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 124.7 ms