Protein–RNA interactions for Protein: Q3U319

Rnf40, E3 ubiquitin-protein ligase BRE1B, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40Q3U319 Gm22204-201ENSMUST00000122654 327 ntBASIC3.73□□□□□ -1.81
Rnf40Q3U319 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.73□□□□□ -1.81
Rnf40Q3U319 Mir6377-201ENSMUST00000183760 114 ntBASIC3.73□□□□□ -1.81
Rnf40Q3U319 Gm35736-201ENSMUST00000203681 313 ntBASIC3.73□□□□□ -1.81
Rnf40Q3U319 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Rnf40Q3U319 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Rnf40Q3U319 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.73□□□□□ -1.81
Rnf40Q3U319 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Rnf40Q3U319 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Rnf40Q3U319 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Rnf40Q3U319 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Rnf40Q3U319 Gm25878-201ENSMUST00000104327 93 ntBASIC3.72□□□□□ -1.81
Rnf40Q3U319 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC3.72□□□□□ -1.81
Rnf40Q3U319 Gm23384-201ENSMUST00000158593 103 ntBASIC3.72□□□□□ -1.81
Rnf40Q3U319 Gm27698-201ENSMUST00000184060 249 ntBASIC3.72□□□□□ -1.81
Rnf40Q3U319 Gm6802-202ENSMUST00000186566 126 ntBASIC3.72□□□□□ -1.81
Rnf40Q3U319 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
Rnf40Q3U319 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Rnf40Q3U319 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
Rnf40Q3U319 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Rnf40Q3U319 Gm25090-201ENSMUST00000104000 132 ntBASIC3.71□□□□□ -1.82
Rnf40Q3U319 Gm26088-201ENSMUST00000157896 131 ntBASIC3.71□□□□□ -1.82
Rnf40Q3U319 Gm22211-201ENSMUST00000158097 156 ntBASIC3.71□□□□□ -1.82
Rnf40Q3U319 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC3.71□□□□□ -1.82
Rnf40Q3U319 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.71□□□□□ -1.82
Rnf40Q3U319 Gm23293-201ENSMUST00000082552 104 ntBASIC3.71□□□□□ -1.82
Rnf40Q3U319 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Rnf40Q3U319 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Rnf40Q3U319 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Rnf40Q3U319 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.7□□□□□ -1.82
Rnf40Q3U319 Gm24250-201ENSMUST00000157320 135 ntBASIC3.7□□□□□ -1.82
Rnf40Q3U319 Gm22332-201ENSMUST00000158072 126 ntBASIC3.7□□□□□ -1.82
Rnf40Q3U319 Gm20409-201ENSMUST00000173457 130 ntBASIC3.7□□□□□ -1.82
Rnf40Q3U319 Gm23770-201ENSMUST00000178009 108 ntBASIC3.7□□□□□ -1.82
Rnf40Q3U319 Gm22832-201ENSMUST00000178022 108 ntBASIC3.7□□□□□ -1.82
Rnf40Q3U319 Gm23863-201ENSMUST00000178265 108 ntBASIC3.7□□□□□ -1.82
Rnf40Q3U319 Gm24828-201ENSMUST00000178507 108 ntBASIC3.7□□□□□ -1.82
Rnf40Q3U319 Gm23052-201ENSMUST00000178633 108 ntBASIC3.7□□□□□ -1.82
Rnf40Q3U319 Gm25729-201ENSMUST00000179050 108 ntBASIC3.7□□□□□ -1.82
Rnf40Q3U319 Gm25359-201ENSMUST00000179315 108 ntBASIC3.7□□□□□ -1.82
Rnf40Q3U319 Gm22624-201ENSMUST00000179913 108 ntBASIC3.7□□□□□ -1.82
Rnf40Q3U319 Gm32381-201ENSMUST00000203192 476 ntBASIC3.7□□□□□ -1.82
Rnf40Q3U319 Gm10042-201ENSMUST00000079884 78 ntBASIC3.7□□□□□ -1.82
Rnf40Q3U319 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Rnf40Q3U319 Gm13567-201ENSMUST00000118026 247 ntBASIC3.69□□□□□ -1.82
Rnf40Q3U319 Gm22816-201ENSMUST00000157450 117 ntBASIC3.69□□□□□ -1.82
Rnf40Q3U319 Gm23381-201ENSMUST00000157676 94 ntBASIC3.69□□□□□ -1.82
Rnf40Q3U319 Mir1931-201ENSMUST00000158589 119 ntBASIC3.69□□□□□ -1.82
Rnf40Q3U319 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC3.69□□□□□ -1.82
Rnf40Q3U319 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC3.69□□□□□ -1.82
Rnf40Q3U319 Gm44491-201ENSMUST00000196794 96 ntBASIC3.69□□□□□ -1.82
Rnf40Q3U319 Gm45288-201ENSMUST00000210236 151 ntBASIC3.69□□□□□ -1.82
Rnf40Q3U319 AC132833.2-201ENSMUST00000228699 157 ntBASIC3.69□□□□□ -1.82
Rnf40Q3U319 AF357341-201ENSMUST00000083088 75 ntBASIC3.69□□□□□ -1.82
Rnf40Q3U319 Gm25481-201ENSMUST00000083221 158 ntBASIC3.69□□□□□ -1.82
Rnf40Q3U319 Mir383-201ENSMUST00000083523 70 ntBASIC3.69□□□□□ -1.82
Rnf40Q3U319 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
Rnf40Q3U319 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Rnf40Q3U319 Gm45265-201ENSMUST00000210852 2497 ntBASIC3.68□□□□□ -1.82
Rnf40Q3U319 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Rnf40Q3U319 Gm25420-201ENSMUST00000104216 127 ntBASIC3.68□□□□□ -1.82
Rnf40Q3U319 Gm14882-201ENSMUST00000117216 218 ntBASIC3.68□□□□□ -1.82
Rnf40Q3U319 Gm26345-201ENSMUST00000157534 120 ntBASIC3.68□□□□□ -1.82
Rnf40Q3U319 Gm37081-201ENSMUST00000192034 196 ntBASIC3.68□□□□□ -1.82
Rnf40Q3U319 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.68□□□□□ -1.82
Rnf40Q3U319 AC154358.1-201ENSMUST00000224871 218 ntBASIC3.68□□□□□ -1.82
Rnf40Q3U319 Gm25124-201ENSMUST00000083345 164 ntBASIC3.68□□□□□ -1.82
Rnf40Q3U319 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Rnf40Q3U319 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Rnf40Q3U319 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Rnf40Q3U319 Gm45652-201ENSMUST00000210926 3831 ntBASIC3.67□□□□□ -1.82
Rnf40Q3U319 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Rnf40Q3U319 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.67□□□□□ -1.82
Rnf40Q3U319 Gm23273-201ENSMUST00000104058 135 ntBASIC3.67□□□□□ -1.82
Rnf40Q3U319 Gm24126-201ENSMUST00000104111 106 ntBASIC3.67□□□□□ -1.82
Rnf40Q3U319 Gm22658-201ENSMUST00000104196 155 ntBASIC3.67□□□□□ -1.82
Rnf40Q3U319 Gm24792-201ENSMUST00000104286 128 ntBASIC3.67□□□□□ -1.82
Rnf40Q3U319 Gm24745-201ENSMUST00000157840 85 ntBASIC3.67□□□□□ -1.82
Rnf40Q3U319 Gm25370-201ENSMUST00000158159 94 ntBASIC3.67□□□□□ -1.82
Rnf40Q3U319 Mir5134-201ENSMUST00000175529 78 ntBASIC3.67□□□□□ -1.82
Rnf40Q3U319 Gm18486-201ENSMUST00000184040 298 ntBASIC3.67□□□□□ -1.82
Rnf40Q3U319 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC3.67□□□□□ -1.82
Rnf40Q3U319 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.67□□□□□ -1.82
Rnf40Q3U319 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Rnf40Q3U319 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Rnf40Q3U319 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
Rnf40Q3U319 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
Rnf40Q3U319 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Rnf40Q3U319 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.66□□□□□ -1.82
Rnf40Q3U319 Mir551b-201ENSMUST00000102165 98 ntBASIC3.66□□□□□ -1.82
Rnf40Q3U319 Gm22269-201ENSMUST00000104002 130 ntBASIC3.66□□□□□ -1.82
Rnf40Q3U319 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.66□□□□□ -1.82
Rnf40Q3U319 Gm23083-201ENSMUST00000157851 116 ntBASIC3.66□□□□□ -1.82
Rnf40Q3U319 Gm23838-201ENSMUST00000158067 162 ntBASIC3.66□□□□□ -1.82
Rnf40Q3U319 Gm26219-201ENSMUST00000175216 71 ntBASIC3.66□□□□□ -1.82
Rnf40Q3U319 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC3.66□□□□□ -1.82
Rnf40Q3U319 Mir26a-2-201ENSMUST00000083496 84 ntBASIC3.66□□□□□ -1.82
Rnf40Q3U319 Mir124a-3-201ENSMUST00000083520 68 ntBASIC3.66□□□□□ -1.82
Rnf40Q3U319 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Rnf40Q3U319 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms