Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Gm26126-201ENSMUST00000083188 164 ntBASIC2.87□□□□□ -1.95
Ddb1Q3U1J4 Gm23249-201ENSMUST00000083369 161 ntBASIC2.87□□□□□ -1.95
Ddb1Q3U1J4 Snora34-201ENSMUST00000083402 138 ntBASIC2.87□□□□□ -1.95
Ddb1Q3U1J4 Gm22723-201ENSMUST00000083820 129 ntBASIC2.87□□□□□ -1.95
Ddb1Q3U1J4 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Ddb1Q3U1J4 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
Ddb1Q3U1J4 Gm12143-201ENSMUST00000119666 332 ntBASIC2.86□□□□□ -1.95
Ddb1Q3U1J4 Gm23043-201ENSMUST00000157890 109 ntBASIC2.86□□□□□ -1.95
Ddb1Q3U1J4 Snord11-201ENSMUST00000158468 84 ntBASIC2.86□□□□□ -1.95
Ddb1Q3U1J4 Gm24573-201ENSMUST00000175499 112 ntBASIC2.86□□□□□ -1.95
Ddb1Q3U1J4 Gm37918-201ENSMUST00000192071 120 ntBASIC2.86□□□□□ -1.95
Ddb1Q3U1J4 Gm37624-201ENSMUST00000193751 219 ntBASIC2.86□□□□□ -1.95
Ddb1Q3U1J4 Gm42834-201ENSMUST00000196845 256 ntBASIC2.86□□□□□ -1.95
Ddb1Q3U1J4 AC166830.2-201ENSMUST00000225821 196 ntBASIC2.86□□□□□ -1.95
Ddb1Q3U1J4 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC2.86□□□□□ -1.95
Ddb1Q3U1J4 Gm22281-201ENSMUST00000157198 103 ntBASIC2.85□□□□□ -1.95
Ddb1Q3U1J4 Gm23536-201ENSMUST00000157541 134 ntBASIC2.85□□□□□ -1.95
Ddb1Q3U1J4 Gm25488-201ENSMUST00000158728 118 ntBASIC2.85□□□□□ -1.95
Ddb1Q3U1J4 Gm20613-201ENSMUST00000175828 345 ntBASIC2.85□□□□□ -1.95
Ddb1Q3U1J4 Mir6353-201ENSMUST00000183596 113 ntBASIC2.85□□□□□ -1.95
Ddb1Q3U1J4 Gm28169-201ENSMUST00000190342 345 ntBASIC2.85□□□□□ -1.95
Ddb1Q3U1J4 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.85□□□□□ -1.95
Ddb1Q3U1J4 Gm22704-201ENSMUST00000083027 137 ntBASIC2.85□□□□□ -1.95
Ddb1Q3U1J4 Gm24762-201ENSMUST00000083689 104 ntBASIC2.85□□□□□ -1.95
Ddb1Q3U1J4 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
Ddb1Q3U1J4 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.84□□□□□ -1.95
Ddb1Q3U1J4 Mir767-201ENSMUST00000103256 107 ntBASIC2.84□□□□□ -1.95
Ddb1Q3U1J4 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.84□□□□□ -1.95
Ddb1Q3U1J4 Gm25910-201ENSMUST00000157620 140 ntBASIC2.84□□□□□ -1.95
Ddb1Q3U1J4 Gm26412-201ENSMUST00000157666 55 ntBASIC2.84□□□□□ -1.95
Ddb1Q3U1J4 Gm24394-201ENSMUST00000158141 123 ntBASIC2.84□□□□□ -1.95
Ddb1Q3U1J4 Gm23571-201ENSMUST00000180073 127 ntBASIC2.84□□□□□ -1.95
Ddb1Q3U1J4 Gm27928-201ENSMUST00000183747 256 ntBASIC2.84□□□□□ -1.95
Ddb1Q3U1J4 Gm26204-201ENSMUST00000082906 107 ntBASIC2.84□□□□□ -1.95
Ddb1Q3U1J4 Mir146-201ENSMUST00000083667 65 ntBASIC2.84□□□□□ -1.95
Ddb1Q3U1J4 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.84□□□□□ -1.95
Ddb1Q3U1J4 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.84□□□□□ -1.96
Ddb1Q3U1J4 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Ddb1Q3U1J4 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Ddb1Q3U1J4 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Ddb1Q3U1J4 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Ddb1Q3U1J4 Snord19-201ENSMUST00000104609 76 ntBASIC2.83□□□□□ -1.96
Ddb1Q3U1J4 Gm23466-201ENSMUST00000157133 106 ntBASIC2.83□□□□□ -1.96
Ddb1Q3U1J4 Gm25914-201ENSMUST00000157618 153 ntBASIC2.83□□□□□ -1.96
Ddb1Q3U1J4 Gm23584-201ENSMUST00000157655 129 ntBASIC2.83□□□□□ -1.96
Ddb1Q3U1J4 Gm28992-201ENSMUST00000190534 139 ntBASIC2.83□□□□□ -1.96
Ddb1Q3U1J4 Gm24813-201ENSMUST00000175310 84 ntBASIC2.82□□□□□ -1.96
Ddb1Q3U1J4 Gm27585-201ENSMUST00000183717 199 ntBASIC2.82□□□□□ -1.96
Ddb1Q3U1J4 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Ddb1Q3U1J4 Gm44666-201ENSMUST00000208544 391 ntBASIC2.82□□□□□ -1.96
Ddb1Q3U1J4 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.82□□□□□ -1.96
Ddb1Q3U1J4 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.82□□□□□ -1.96
Ddb1Q3U1J4 Mir466p-201ENSMUST00000103925 89 ntBASIC2.81□□□□□ -1.96
Ddb1Q3U1J4 Gm24283-201ENSMUST00000104233 107 ntBASIC2.81□□□□□ -1.96
Ddb1Q3U1J4 Gm11204-201ENSMUST00000122438 147 ntBASIC2.81□□□□□ -1.96
Ddb1Q3U1J4 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC2.81□□□□□ -1.96
Ddb1Q3U1J4 Mir28b-201ENSMUST00000175399 80 ntBASIC2.81□□□□□ -1.96
Ddb1Q3U1J4 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Ddb1Q3U1J4 Gm36189-201ENSMUST00000204113 523 ntBASIC2.81□□□□□ -1.96
Ddb1Q3U1J4 Gm44563-201ENSMUST00000207958 178 ntBASIC2.81□□□□□ -1.96
Ddb1Q3U1J4 AC132615.1-201ENSMUST00000213873 255 ntBASIC2.81□□□□□ -1.96
Ddb1Q3U1J4 Gm11351-202ENSMUST00000225724 478 ntBASIC2.81□□□□□ -1.96
Ddb1Q3U1J4 Gm24977-201ENSMUST00000083106 163 ntBASIC2.81□□□□□ -1.96
Ddb1Q3U1J4 Gm25628-201ENSMUST00000084002 105 ntBASIC2.81□□□□□ -1.96
Ddb1Q3U1J4 Mir471-201ENSMUST00000093596 67 ntBASIC2.81□□□□□ -1.96
Ddb1Q3U1J4 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.81□□□□□ -1.96
Ddb1Q3U1J4 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.81□□□□□ -1.96
Ddb1Q3U1J4 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Ddb1Q3U1J4 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.81□□□□□ -1.96
Ddb1Q3U1J4 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Ddb1Q3U1J4 Gm24098-201ENSMUST00000102075 109 ntBASIC2.8□□□□□ -1.96
Ddb1Q3U1J4 Gm25381-201ENSMUST00000102078 109 ntBASIC2.8□□□□□ -1.96
Ddb1Q3U1J4 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC2.8□□□□□ -1.96
Ddb1Q3U1J4 Gm44352-201ENSMUST00000196358 110 ntBASIC2.8□□□□□ -1.96
Ddb1Q3U1J4 Gm44482-201ENSMUST00000199232 103 ntBASIC2.8□□□□□ -1.96
Ddb1Q3U1J4 AC165293.1-201ENSMUST00000219669 329 ntBASIC2.8□□□□□ -1.96
Ddb1Q3U1J4 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
Ddb1Q3U1J4 Gm2830-201ENSMUST00000140330 385 ntBASIC2.79□□□□□ -1.96
Ddb1Q3U1J4 Gm24237-201ENSMUST00000157790 132 ntBASIC2.79□□□□□ -1.96
Ddb1Q3U1J4 Gm16561-201ENSMUST00000163001 192 ntBASIC2.79□□□□□ -1.96
Ddb1Q3U1J4 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC2.79□□□□□ -1.96
Ddb1Q3U1J4 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC2.79□□□□□ -1.96
Ddb1Q3U1J4 Gm44182-201ENSMUST00000204052 115 ntBASIC2.79□□□□□ -1.96
Ddb1Q3U1J4 Gm19790-201ENSMUST00000214414 251 ntBASIC2.79□□□□□ -1.96
Ddb1Q3U1J4 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC2.79□□□□□ -1.96
Ddb1Q3U1J4 CT010449.1-201ENSMUST00000220624 153 ntBASIC2.79□□□□□ -1.96
Ddb1Q3U1J4 Snord104-201ENSMUST00000083192 70 ntBASIC2.79□□□□□ -1.96
Ddb1Q3U1J4 Gm22972-201ENSMUST00000083297 131 ntBASIC2.79□□□□□ -1.96
Ddb1Q3U1J4 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Ddb1Q3U1J4 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.79□□□□□ -1.96
Ddb1Q3U1J4 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Ddb1Q3U1J4 Gm24440-201ENSMUST00000157236 63 ntBASIC2.78□□□□□ -1.96
Ddb1Q3U1J4 Gm22556-201ENSMUST00000157803 100 ntBASIC2.78□□□□□ -1.96
Ddb1Q3U1J4 Gm22483-201ENSMUST00000157986 274 ntBASIC2.78□□□□□ -1.96
Ddb1Q3U1J4 Gm23223-201ENSMUST00000158119 127 ntBASIC2.78□□□□□ -1.96
Ddb1Q3U1J4 Gm24512-201ENSMUST00000174963 65 ntBASIC2.78□□□□□ -1.96
Ddb1Q3U1J4 Gm24304-201ENSMUST00000177635 107 ntBASIC2.78□□□□□ -1.96
Ddb1Q3U1J4 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.78□□□□□ -1.96
Ddb1Q3U1J4 Gm43563-201ENSMUST00000196761 198 ntBASIC2.78□□□□□ -1.96
Ddb1Q3U1J4 Gm26922-201ENSMUST00000082687 72 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 154.1 ms