Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm24618-201ENSMUST00000177718 94 ntBASIC0.8□□□□□ -2.28
Trim43aQ3TL54 Gm23953-201ENSMUST00000178214 94 ntBASIC0.8□□□□□ -2.28
Trim43aQ3TL54 Gm26332-201ENSMUST00000179813 94 ntBASIC0.8□□□□□ -2.28
Trim43aQ3TL54 Gm22863-201ENSMUST00000180265 94 ntBASIC0.8□□□□□ -2.28
Trim43aQ3TL54 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
Trim43aQ3TL54 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC0.8□□□□□ -2.28
Trim43aQ3TL54 Gm37918-201ENSMUST00000192071 120 ntBASIC0.8□□□□□ -2.28
Trim43aQ3TL54 Gm9227-201ENSMUST00000194733 566 ntBASIC0.8□□□□□ -2.28
Trim43aQ3TL54 Gm37399-201ENSMUST00000195224 416 ntBASIC0.8□□□□□ -2.28
Trim43aQ3TL54 AC129208.2-201ENSMUST00000228506 320 ntBASIC0.8□□□□□ -2.28
Trim43aQ3TL54 Gm24150-201ENSMUST00000082759 104 ntBASIC0.8□□□□□ -2.28
Trim43aQ3TL54 Gm24035-201ENSMUST00000082867 107 ntBASIC0.8□□□□□ -2.28
Trim43aQ3TL54 Gm12143-201ENSMUST00000119666 332 ntBASIC0.79□□□□□ -2.28
Trim43aQ3TL54 Defb44-ps-201ENSMUST00000126871 219 ntBASIC0.79□□□□□ -2.28
Trim43aQ3TL54 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
Trim43aQ3TL54 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC0.79□□□□□ -2.28
Trim43aQ3TL54 Gm22403-201ENSMUST00000174919 84 ntBASIC0.79□□□□□ -2.28
Trim43aQ3TL54 Mir3109-201ENSMUST00000175301 88 ntBASIC0.79□□□□□ -2.28
Trim43aQ3TL54 Gm17067-202ENSMUST00000180131 123 ntBASIC0.79□□□□□ -2.28
Trim43aQ3TL54 Gm42855-201ENSMUST00000197388 253 ntBASIC0.79□□□□□ -2.28
Trim43aQ3TL54 Gm20144-201ENSMUST00000203031 165 ntBASIC0.79□□□□□ -2.28
Trim43aQ3TL54 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC0.79□□□□□ -2.28
Trim43aQ3TL54 AC164161.1-201ENSMUST00000214076 639 ntBASIC0.79□□□□□ -2.28
Trim43aQ3TL54 AC125020.2-201ENSMUST00000218894 348 ntBASIC0.79□□□□□ -2.28
Trim43aQ3TL54 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
Trim43aQ3TL54 Gm24038-201ENSMUST00000082872 159 ntBASIC0.79□□□□□ -2.28
Trim43aQ3TL54 Gm24261-201ENSMUST00000083744 104 ntBASIC0.79□□□□□ -2.28
Trim43aQ3TL54 Gm23041-201ENSMUST00000083868 106 ntBASIC0.79□□□□□ -2.28
Trim43aQ3TL54 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC0.78□□□□□ -2.28
Trim43aQ3TL54 Gm25544-201ENSMUST00000122676 120 ntBASIC0.78□□□□□ -2.28
Trim43aQ3TL54 Gm15899-201ENSMUST00000128586 238 ntBASIC0.78□□□□□ -2.28
Trim43aQ3TL54 Gm25901-201ENSMUST00000158494 130 ntBASIC0.78□□□□□ -2.28
Trim43aQ3TL54 Snora24-201ENSMUST00000174989 130 ntBASIC0.78□□□□□ -2.28
Trim43aQ3TL54 Gm24799-201ENSMUST00000178431 79 ntBASIC0.78□□□□□ -2.28
Trim43aQ3TL54 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC0.78□□□□□ -2.28
Trim43aQ3TL54 Mir6346-201ENSMUST00000183982 81 ntBASIC0.78□□□□□ -2.28
Trim43aQ3TL54 Gm44010-201ENSMUST00000204432 331 ntBASIC0.78□□□□□ -2.28
Trim43aQ3TL54 Gm25579-201ENSMUST00000083407 106 ntBASIC0.78□□□□□ -2.28
Trim43aQ3TL54 Mir133a-1-201ENSMUST00000083465 68 ntBASIC0.78□□□□□ -2.28
Trim43aQ3TL54 Gm22656-201ENSMUST00000104199 171 ntBASIC0.77□□□□□ -2.29
Trim43aQ3TL54 Gm14296-202ENSMUST00000108931 750 ntBASIC0.77□□□□□ -2.29
Trim43aQ3TL54 Gm22279-201ENSMUST00000157200 93 ntBASIC0.77□□□□□ -2.29
Trim43aQ3TL54 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC0.77□□□□□ -2.29
Trim43aQ3TL54 Gm23355-201ENSMUST00000177614 107 ntBASIC0.77□□□□□ -2.29
Trim43aQ3TL54 Gm27420-201ENSMUST00000183823 79 ntBASIC0.77□□□□□ -2.29
Trim43aQ3TL54 Gm28992-201ENSMUST00000190534 139 ntBASIC0.77□□□□□ -2.29
Trim43aQ3TL54 Gm42719-201ENSMUST00000197393 355 ntBASIC0.77□□□□□ -2.29
Trim43aQ3TL54 AC164612.2-202ENSMUST00000216314 253 ntBASIC0.77□□□□□ -2.29
Trim43aQ3TL54 AC155712.1-201ENSMUST00000219704 160 ntBASIC0.77□□□□□ -2.29
Trim43aQ3TL54 AC116589.3-202ENSMUST00000221770 649 ntBASIC0.77□□□□□ -2.29
Trim43aQ3TL54 AC116589.6-201ENSMUST00000222252 649 ntBASIC0.77□□□□□ -2.29
Trim43aQ3TL54 AC114916.1-201ENSMUST00000228465 494 ntBASIC0.77□□□□□ -2.29
Trim43aQ3TL54 Gm24355-201ENSMUST00000082858 122 ntBASIC0.77□□□□□ -2.29
Trim43aQ3TL54 Gm23721-201ENSMUST00000083005 107 ntBASIC0.77□□□□□ -2.29
Trim43aQ3TL54 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC0.77□□□□□ -2.29
Trim43aQ3TL54 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
Trim43aQ3TL54 Gm24579-201ENSMUST00000103964 144 ntBASIC0.76□□□□□ -2.29
Trim43aQ3TL54 Gm12770-201ENSMUST00000121734 462 ntBASIC0.76□□□□□ -2.29
Trim43aQ3TL54 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC0.76□□□□□ -2.29
Trim43aQ3TL54 Gm23106-201ENSMUST00000157554 101 ntBASIC0.76□□□□□ -2.29
Trim43aQ3TL54 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.76□□□□□ -2.29
Trim43aQ3TL54 Gm26180-201ENSMUST00000179942 107 ntBASIC0.76□□□□□ -2.29
Trim43aQ3TL54 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.76□□□□□ -2.29
Trim43aQ3TL54 AC125167.1-201ENSMUST00000198698 141 ntBASIC0.76□□□□□ -2.29
Trim43aQ3TL54 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC0.76□□□□□ -2.29
Trim43aQ3TL54 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC0.76□□□□□ -2.29
Trim43aQ3TL54 Gm24152-201ENSMUST00000082764 163 ntBASIC0.76□□□□□ -2.29
Trim43aQ3TL54 Gm24356-201ENSMUST00000082859 106 ntBASIC0.76□□□□□ -2.29
Trim43aQ3TL54 Gm25789-201ENSMUST00000083294 76 ntBASIC0.76□□□□□ -2.29
Trim43aQ3TL54 Gm26164-201ENSMUST00000083793 104 ntBASIC0.76□□□□□ -2.29
Trim43aQ3TL54 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
Trim43aQ3TL54 Gm11572-201ENSMUST00000119164 120 ntBASIC0.75□□□□□ -2.29
Trim43aQ3TL54 Gm26358-201ENSMUST00000158215 97 ntBASIC0.75□□□□□ -2.29
Trim43aQ3TL54 Gm22113-201ENSMUST00000158343 104 ntBASIC0.75□□□□□ -2.29
Trim43aQ3TL54 Gm23008-201ENSMUST00000158946 80 ntBASIC0.75□□□□□ -2.29
Trim43aQ3TL54 Gm24487-201ENSMUST00000178017 63 ntBASIC0.75□□□□□ -2.29
Trim43aQ3TL54 Gm20257-202ENSMUST00000188643 130 ntBASIC0.75□□□□□ -2.29
Trim43aQ3TL54 Gm44960-201ENSMUST00000207403 141 ntBASIC0.75□□□□□ -2.29
Trim43aQ3TL54 AC173482.5-201ENSMUST00000224181 327 ntBASIC0.75□□□□□ -2.29
Trim43aQ3TL54 Gm22685-201ENSMUST00000082848 106 ntBASIC0.75□□□□□ -2.29
Trim43aQ3TL54 Gm25578-201ENSMUST00000083406 104 ntBASIC0.75□□□□□ -2.29
Trim43aQ3TL54 Mir155-201ENSMUST00000083463 65 ntBASIC0.75□□□□□ -2.29
Trim43aQ3TL54 Mir216a-201ENSMUST00000083605 72 ntBASIC0.75□□□□□ -2.29
Trim43aQ3TL54 Gm25513-201ENSMUST00000083861 162 ntBASIC0.75□□□□□ -2.29
Trim43aQ3TL54 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
Trim43aQ3TL54 Gm14782-201ENSMUST00000120151 195 ntBASIC0.74□□□□□ -2.29
Trim43aQ3TL54 Gm11792-201ENSMUST00000120640 168 ntBASIC0.74□□□□□ -2.29
Trim43aQ3TL54 Gm25805-201ENSMUST00000122788 108 ntBASIC0.74□□□□□ -2.29
Trim43aQ3TL54 Gm25884-201ENSMUST00000157782 62 ntBASIC0.74□□□□□ -2.29
Trim43aQ3TL54 Gm25434-201ENSMUST00000158278 167 ntBASIC0.74□□□□□ -2.29
Trim43aQ3TL54 Gm22435-201ENSMUST00000158552 128 ntBASIC0.74□□□□□ -2.29
Trim43aQ3TL54 Gm24277-201ENSMUST00000158661 104 ntBASIC0.74□□□□□ -2.29
Trim43aQ3TL54 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC0.74□□□□□ -2.29
Trim43aQ3TL54 Mir344d-3-201ENSMUST00000175458 80 ntBASIC0.74□□□□□ -2.29
Trim43aQ3TL54 Gm27236-201ENSMUST00000184147 442 ntBASIC0.74□□□□□ -2.29
Trim43aQ3TL54 Gm28862-201ENSMUST00000188246 163 ntBASIC0.74□□□□□ -2.29
Trim43aQ3TL54 Gm43250-201ENSMUST00000196536 273 ntBASIC0.74□□□□□ -2.29
Trim43aQ3TL54 Gm33654-201ENSMUST00000221704 215 ntBASIC0.74□□□□□ -2.29
Trim43aQ3TL54 Gm9795-201ENSMUST00000062156 693 ntBASIC0.74□□□□□ -2.29
Trim43aQ3TL54 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 153.9 ms