Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Gm15002-201ENSMUST00000118406 452 ntBASIC1.53□□□□□ -2.16
Ptchd3Q0EEE2 Gm24677-201ENSMUST00000158755 150 ntBASIC1.53□□□□□ -2.16
Ptchd3Q0EEE2 Gm24177-201ENSMUST00000158927 131 ntBASIC1.53□□□□□ -2.16
Ptchd3Q0EEE2 Mir3057-201ENSMUST00000175040 91 ntBASIC1.53□□□□□ -2.16
Ptchd3Q0EEE2 Gm27517-201ENSMUST00000184347 236 ntBASIC1.53□□□□□ -2.16
Ptchd3Q0EEE2 Mir7017-201ENSMUST00000184894 62 ntBASIC1.53□□□□□ -2.16
Ptchd3Q0EEE2 Gm37579-201ENSMUST00000194291 142 ntBASIC1.53□□□□□ -2.16
Ptchd3Q0EEE2 Gm44373-201ENSMUST00000196112 169 ntBASIC1.53□□□□□ -2.16
Ptchd3Q0EEE2 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC1.53□□□□□ -2.16
Ptchd3Q0EEE2 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.53□□□□□ -2.16
Ptchd3Q0EEE2 Gm22723-201ENSMUST00000083820 129 ntBASIC1.53□□□□□ -2.16
Ptchd3Q0EEE2 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Ptchd3Q0EEE2 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Ptchd3Q0EEE2 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Ptchd3Q0EEE2 Gm26402-201ENSMUST00000158499 113 ntBASIC1.52□□□□□ -2.17
Ptchd3Q0EEE2 Gm25836-201ENSMUST00000158918 123 ntBASIC1.52□□□□□ -2.17
Ptchd3Q0EEE2 Gm27421-201ENSMUST00000184729 167 ntBASIC1.52□□□□□ -2.17
Ptchd3Q0EEE2 Gm28383-201ENSMUST00000187563 139 ntBASIC1.52□□□□□ -2.17
Ptchd3Q0EEE2 Gm28849-201ENSMUST00000188127 174 ntBASIC1.52□□□□□ -2.17
Ptchd3Q0EEE2 Gm29262-201ENSMUST00000190084 196 ntBASIC1.52□□□□□ -2.17
Ptchd3Q0EEE2 Gm28330-201ENSMUST00000190353 171 ntBASIC1.52□□□□□ -2.17
Ptchd3Q0EEE2 Gm45654-201ENSMUST00000210980 123 ntBASIC1.52□□□□□ -2.17
Ptchd3Q0EEE2 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.52□□□□□ -2.17
Ptchd3Q0EEE2 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.52□□□□□ -2.17
Ptchd3Q0EEE2 Gm25930-201ENSMUST00000082785 107 ntBASIC1.52□□□□□ -2.17
Ptchd3Q0EEE2 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC1.51□□□□□ -2.17
Ptchd3Q0EEE2 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.51□□□□□ -2.17
Ptchd3Q0EEE2 Gm25992-201ENSMUST00000102437 109 ntBASIC1.51□□□□□ -2.17
Ptchd3Q0EEE2 Gm11606-201ENSMUST00000120706 617 ntBASIC1.51□□□□□ -2.17
Ptchd3Q0EEE2 Gm13725-201ENSMUST00000122139 207 ntBASIC1.51□□□□□ -2.17
Ptchd3Q0EEE2 Gm23048-201ENSMUST00000157237 129 ntBASIC1.51□□□□□ -2.17
Ptchd3Q0EEE2 Gm23390-201ENSMUST00000157393 106 ntBASIC1.51□□□□□ -2.17
Ptchd3Q0EEE2 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC1.51□□□□□ -2.17
Ptchd3Q0EEE2 Gm7958-201ENSMUST00000178255 468 ntBASIC1.51□□□□□ -2.17
Ptchd3Q0EEE2 Gm22448-201ENSMUST00000179254 107 ntBASIC1.51□□□□□ -2.17
Ptchd3Q0EEE2 Gm7950-201ENSMUST00000179633 468 ntBASIC1.51□□□□□ -2.17
Ptchd3Q0EEE2 Mir7026-201ENSMUST00000184384 67 ntBASIC1.51□□□□□ -2.17
Ptchd3Q0EEE2 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.51□□□□□ -2.17
Ptchd3Q0EEE2 Mir7227-201ENSMUST00000200408 59 ntBASIC1.51□□□□□ -2.17
Ptchd3Q0EEE2 Gm44962-201ENSMUST00000206460 279 ntBASIC1.51□□□□□ -2.17
Ptchd3Q0EEE2 Gm23406-201ENSMUST00000082537 122 ntBASIC1.51□□□□□ -2.17
Ptchd3Q0EEE2 Gm24764-201ENSMUST00000083686 199 ntBASIC1.51□□□□□ -2.17
Ptchd3Q0EEE2 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.5□□□□□ -2.17
Ptchd3Q0EEE2 Gm15115-201ENSMUST00000121145 264 ntBASIC1.5□□□□□ -2.17
Ptchd3Q0EEE2 Gm22027-201ENSMUST00000122737 127 ntBASIC1.5□□□□□ -2.17
Ptchd3Q0EEE2 Gm26181-201ENSMUST00000157687 106 ntBASIC1.5□□□□□ -2.17
Ptchd3Q0EEE2 Gm23579-201ENSMUST00000158528 103 ntBASIC1.5□□□□□ -2.17
Ptchd3Q0EEE2 Gm27265-201ENSMUST00000183559 77 ntBASIC1.5□□□□□ -2.17
Ptchd3Q0EEE2 Mir6419-201ENSMUST00000184784 113 ntBASIC1.5□□□□□ -2.17
Ptchd3Q0EEE2 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC1.5□□□□□ -2.17
Ptchd3Q0EEE2 Mir465d-201ENSMUST00000196314 58 ntBASIC1.5□□□□□ -2.17
Ptchd3Q0EEE2 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.5□□□□□ -2.17
Ptchd3Q0EEE2 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC1.5□□□□□ -2.17
Ptchd3Q0EEE2 Gm16976-205ENSMUST00000227324 226 ntBASIC1.5□□□□□ -2.17
Ptchd3Q0EEE2 Gm24164-201ENSMUST00000093663 104 ntBASIC1.5□□□□□ -2.17
Ptchd3Q0EEE2 Gm23011-201ENSMUST00000104148 132 ntBASIC1.49□□□□□ -2.17
Ptchd3Q0EEE2 Mir293-201ENSMUST00000104841 80 ntBASIC1.49□□□□□ -2.17
Ptchd3Q0EEE2 Gm24895-201ENSMUST00000122742 74 ntBASIC1.49□□□□□ -2.17
Ptchd3Q0EEE2 Gm24394-201ENSMUST00000158141 123 ntBASIC1.49□□□□□ -2.17
Ptchd3Q0EEE2 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.49□□□□□ -2.17
Ptchd3Q0EEE2 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.49□□□□□ -2.17
Ptchd3Q0EEE2 Gm45005-201ENSMUST00000206640 157 ntBASIC1.49□□□□□ -2.17
Ptchd3Q0EEE2 Gm29818-201ENSMUST00000218070 165 ntBASIC1.49□□□□□ -2.17
Ptchd3Q0EEE2 Gm23055-201ENSMUST00000082805 94 ntBASIC1.49□□□□□ -2.17
Ptchd3Q0EEE2 Gm24316-201ENSMUST00000083041 107 ntBASIC1.49□□□□□ -2.17
Ptchd3Q0EEE2 Snora3-201ENSMUST00000083082 132 ntBASIC1.49□□□□□ -2.17
Ptchd3Q0EEE2 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.49□□□□□ -2.17
Ptchd3Q0EEE2 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.48□□□□□ -2.17
Ptchd3Q0EEE2 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.48□□□□□ -2.17
Ptchd3Q0EEE2 Gm22761-201ENSMUST00000102278 96 ntBASIC1.48□□□□□ -2.17
Ptchd3Q0EEE2 Mir653-201ENSMUST00000102402 85 ntBASIC1.48□□□□□ -2.17
Ptchd3Q0EEE2 Gm12512-201ENSMUST00000119620 217 ntBASIC1.48□□□□□ -2.17
Ptchd3Q0EEE2 Gm14937-201ENSMUST00000119709 208 ntBASIC1.48□□□□□ -2.17
Ptchd3Q0EEE2 Gm13967-201ENSMUST00000120404 380 ntBASIC1.48□□□□□ -2.17
Ptchd3Q0EEE2 Defb44-ps-201ENSMUST00000126871 219 ntBASIC1.48□□□□□ -2.17
Ptchd3Q0EEE2 Gm24277-201ENSMUST00000158661 104 ntBASIC1.48□□□□□ -2.17
Ptchd3Q0EEE2 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Ptchd3Q0EEE2 Gm42594-201ENSMUST00000199511 246 ntBASIC1.48□□□□□ -2.17
Ptchd3Q0EEE2 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.48□□□□□ -2.17
Ptchd3Q0EEE2 Gm26135-201ENSMUST00000101993 72 ntBASIC1.47□□□□□ -2.17
Ptchd3Q0EEE2 Mir767-201ENSMUST00000103256 107 ntBASIC1.47□□□□□ -2.17
Ptchd3Q0EEE2 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Ptchd3Q0EEE2 Gm23010-201ENSMUST00000104151 126 ntBASIC1.47□□□□□ -2.17
Ptchd3Q0EEE2 Gm12837-201ENSMUST00000120131 373 ntBASIC1.47□□□□□ -2.17
Ptchd3Q0EEE2 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC1.47□□□□□ -2.17
Ptchd3Q0EEE2 Gm23170-201ENSMUST00000157158 106 ntBASIC1.47□□□□□ -2.17
Ptchd3Q0EEE2 Gm24229-201ENSMUST00000158830 118 ntBASIC1.47□□□□□ -2.17
Ptchd3Q0EEE2 Gm24668-201ENSMUST00000158935 104 ntBASIC1.47□□□□□ -2.17
Ptchd3Q0EEE2 Snord50b-201ENSMUST00000178497 72 ntBASIC1.47□□□□□ -2.17
Ptchd3Q0EEE2 Gm28912-201ENSMUST00000189001 234 ntBASIC1.47□□□□□ -2.17
Ptchd3Q0EEE2 Gm23370-201ENSMUST00000199545 130 ntBASIC1.47□□□□□ -2.17
Ptchd3Q0EEE2 AC163295.1-201ENSMUST00000227840 314 ntBASIC1.47□□□□□ -2.17
Ptchd3Q0EEE2 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
Ptchd3Q0EEE2 Gm24966-201ENSMUST00000082443 79 ntBASIC1.47□□□□□ -2.17
Ptchd3Q0EEE2 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Ptchd3Q0EEE2 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.46□□□□□ -2.18
Ptchd3Q0EEE2 Gm23941-201ENSMUST00000101953 107 ntBASIC1.46□□□□□ -2.18
Ptchd3Q0EEE2 Gm25068-201ENSMUST00000103895 110 ntBASIC1.46□□□□□ -2.18
Ptchd3Q0EEE2 Gm23656-201ENSMUST00000122626 112 ntBASIC1.46□□□□□ -2.18
Ptchd3Q0EEE2 Gm27723-201ENSMUST00000157398 63 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 308.5 ms