Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Col8a1Q00780 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Col8a1Q00780 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
Col8a1Q00780 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Col8a1Q00780 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC2.61□□□□□ -1.99
Col8a1Q00780 Gm26104-201ENSMUST00000157250 108 ntBASIC2.61□□□□□ -1.99
Col8a1Q00780 Gm23559-201ENSMUST00000157824 103 ntBASIC2.61□□□□□ -1.99
Col8a1Q00780 Gm24878-201ENSMUST00000158782 104 ntBASIC2.61□□□□□ -1.99
Col8a1Q00780 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.61□□□□□ -1.99
Col8a1Q00780 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Col8a1Q00780 Gm43239-201ENSMUST00000200131 201 ntBASIC2.61□□□□□ -1.99
Col8a1Q00780 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.61□□□□□ -1.99
Col8a1Q00780 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.61□□□□□ -1.99
Col8a1Q00780 AC126939.3-201ENSMUST00000226061 166 ntBASIC2.61□□□□□ -1.99
Col8a1Q00780 Gm10025-201ENSMUST00000079568 372 ntBASIC2.61□□□□□ -1.99
Col8a1Q00780 Gm22738-201ENSMUST00000083440 147 ntBASIC2.61□□□□□ -1.99
Col8a1Q00780 Mir201-201ENSMUST00000083470 66 ntBASIC2.61□□□□□ -1.99
Col8a1Q00780 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.61□□□□□ -1.99
Col8a1Q00780 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC2.61□□□□□ -1.99
Col8a1Q00780 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.61□□□□□ -1.99
Col8a1Q00780 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Col8a1Q00780 AC122850.1-201ENSMUST00000220380 5690 ntBASIC2.6□□□□□ -1.99
Col8a1Q00780 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Col8a1Q00780 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Col8a1Q00780 Gm23907-201ENSMUST00000104595 189 ntBASIC2.6□□□□□ -1.99
Col8a1Q00780 Gm13560-201ENSMUST00000121865 329 ntBASIC2.6□□□□□ -1.99
Col8a1Q00780 Gm24595-201ENSMUST00000122501 110 ntBASIC2.6□□□□□ -1.99
Col8a1Q00780 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC2.6□□□□□ -1.99
Col8a1Q00780 Gm22527-201ENSMUST00000158816 106 ntBASIC2.6□□□□□ -1.99
Col8a1Q00780 Gm25198-201ENSMUST00000178574 110 ntBASIC2.6□□□□□ -1.99
Col8a1Q00780 Gm20058-201ENSMUST00000186939 284 ntBASIC2.6□□□□□ -1.99
Col8a1Q00780 Gm44526-201ENSMUST00000204664 121 ntBASIC2.6□□□□□ -1.99
Col8a1Q00780 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Col8a1Q00780 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.6□□□□□ -1.99
Col8a1Q00780 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Col8a1Q00780 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Col8a1Q00780 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Col8a1Q00780 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Col8a1Q00780 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.6□□□□□ -1.99
Col8a1Q00780 Gm43268-201ENSMUST00000201536 4055 ntBASIC2.6□□□□□ -1.99
Col8a1Q00780 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Col8a1Q00780 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Col8a1Q00780 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Col8a1Q00780 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Col8a1Q00780 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Col8a1Q00780 Gm22193-201ENSMUST00000116868 76 ntBASIC2.59□□□□□ -1.99
Col8a1Q00780 Gm11253-201ENSMUST00000118486 201 ntBASIC2.59□□□□□ -1.99
Col8a1Q00780 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC2.59□□□□□ -1.99
Col8a1Q00780 Gm23599-201ENSMUST00000157261 251 ntBASIC2.59□□□□□ -1.99
Col8a1Q00780 Gm25059-201ENSMUST00000157367 117 ntBASIC2.59□□□□□ -1.99
Col8a1Q00780 Mir28b-201ENSMUST00000175399 80 ntBASIC2.59□□□□□ -1.99
Col8a1Q00780 Gm21064-202ENSMUST00000190583 278 ntBASIC2.59□□□□□ -1.99
Col8a1Q00780 Gm44358-201ENSMUST00000196301 98 ntBASIC2.59□□□□□ -1.99
Col8a1Q00780 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.59□□□□□ -1.99
Col8a1Q00780 Gm45452-201ENSMUST00000210905 177 ntBASIC2.59□□□□□ -1.99
Col8a1Q00780 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.59□□□□□ -1.99
Col8a1Q00780 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Col8a1Q00780 Gm44150-201ENSMUST00000203317 2619 ntBASIC2.59□□□□□ -1.99
Col8a1Q00780 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC2.59□□□□□ -2
Col8a1Q00780 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC2.59□□□□□ -2
Col8a1Q00780 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC2.59□□□□□ -2
Col8a1Q00780 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Col8a1Q00780 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Col8a1Q00780 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Col8a1Q00780 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.58□□□□□ -2
Col8a1Q00780 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Col8a1Q00780 Gm26423-201ENSMUST00000104277 128 ntBASIC2.58□□□□□ -2
Col8a1Q00780 Gm26342-201ENSMUST00000104557 129 ntBASIC2.58□□□□□ -2
Col8a1Q00780 Gm24908-201ENSMUST00000157294 127 ntBASIC2.58□□□□□ -2
Col8a1Q00780 Gm23665-201ENSMUST00000158054 62 ntBASIC2.58□□□□□ -2
Col8a1Q00780 Gm22521-201ENSMUST00000158272 134 ntBASIC2.58□□□□□ -2
Col8a1Q00780 Gm25678-201ENSMUST00000174984 73 ntBASIC2.58□□□□□ -2
Col8a1Q00780 Mir5127-201ENSMUST00000175295 71 ntBASIC2.58□□□□□ -2
Col8a1Q00780 Gm24816-201ENSMUST00000175311 151 ntBASIC2.58□□□□□ -2
Col8a1Q00780 Gm26061-201ENSMUST00000175584 108 ntBASIC2.58□□□□□ -2
Col8a1Q00780 Gm44326-201ENSMUST00000198226 101 ntBASIC2.58□□□□□ -2
Col8a1Q00780 Gm43899-201ENSMUST00000203675 246 ntBASIC2.58□□□□□ -2
Col8a1Q00780 AC149294.9-201ENSMUST00000227256 164 ntBASIC2.58□□□□□ -2
Col8a1Q00780 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC2.58□□□□□ -2
Col8a1Q00780 Gm23377-201ENSMUST00000082943 126 ntBASIC2.58□□□□□ -2
Col8a1Q00780 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Col8a1Q00780 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
Col8a1Q00780 Gm43879-201ENSMUST00000203811 3760 ntBASIC2.58□□□□□ -2
Col8a1Q00780 Gm44177-201ENSMUST00000204338 2667 ntBASIC2.57□□□□□ -2
Col8a1Q00780 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Col8a1Q00780 Gm43875-201ENSMUST00000203319 2475 ntBASIC2.57□□□□□ -2
Col8a1Q00780 Gm25529-201ENSMUST00000104850 92 ntBASIC2.57□□□□□ -2
Col8a1Q00780 Snord100-201ENSMUST00000116836 74 ntBASIC2.57□□□□□ -2
Col8a1Q00780 Gm7123-201ENSMUST00000117647 213 ntBASIC2.57□□□□□ -2
Col8a1Q00780 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.57□□□□□ -2
Col8a1Q00780 Gm23268-201ENSMUST00000175494 78 ntBASIC2.57□□□□□ -2
Col8a1Q00780 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC2.57□□□□□ -2
Col8a1Q00780 Gm28169-201ENSMUST00000190342 345 ntBASIC2.57□□□□□ -2
Col8a1Q00780 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.57□□□□□ -2
Col8a1Q00780 Gm44308-201ENSMUST00000197080 99 ntBASIC2.57□□□□□ -2
Col8a1Q00780 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC2.57□□□□□ -2
Col8a1Q00780 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC2.57□□□□□ -2
Col8a1Q00780 AC126672.1-201ENSMUST00000217096 396 ntBASIC2.57□□□□□ -2
Col8a1Q00780 Gm8219-201ENSMUST00000218309 242 ntBASIC2.57□□□□□ -2
Col8a1Q00780 Gm25851-201ENSMUST00000082794 107 ntBASIC2.57□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 99.6 ms