Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC1.13□□□□□ -2.23
Ufd1P70362 AC145736.2-201ENSMUST00000216305 365 ntBASIC1.13□□□□□ -2.23
Ufd1P70362 AC116589.4-201ENSMUST00000222390 216 ntBASIC1.13□□□□□ -2.23
Ufd1P70362 Gm26111-201ENSMUST00000083969 106 ntBASIC1.13□□□□□ -2.23
Ufd1P70362 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.13□□□□□ -2.23
Ufd1P70362 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.12□□□□□ -2.23
Ufd1P70362 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.12□□□□□ -2.23
Ufd1P70362 Gm22761-201ENSMUST00000102278 96 ntBASIC1.12□□□□□ -2.23
Ufd1P70362 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.12□□□□□ -2.23
Ufd1P70362 Gm13433-201ENSMUST00000121701 240 ntBASIC1.12□□□□□ -2.23
Ufd1P70362 Gm25781-201ENSMUST00000122527 84 ntBASIC1.12□□□□□ -2.23
Ufd1P70362 Gm23277-201ENSMUST00000157914 136 ntBASIC1.12□□□□□ -2.23
Ufd1P70362 Gm24737-201ENSMUST00000158861 100 ntBASIC1.12□□□□□ -2.23
Ufd1P70362 Gm37313-201ENSMUST00000191673 290 ntBASIC1.12□□□□□ -2.23
Ufd1P70362 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.12□□□□□ -2.23
Ufd1P70362 Gm37801-201ENSMUST00000194754 274 ntBASIC1.12□□□□□ -2.23
Ufd1P70362 Gm45296-201ENSMUST00000209625 205 ntBASIC1.12□□□□□ -2.23
Ufd1P70362 AC125020.2-201ENSMUST00000218894 348 ntBASIC1.12□□□□□ -2.23
Ufd1P70362 Mir320-201ENSMUST00000083594 82 ntBASIC1.12□□□□□ -2.23
Ufd1P70362 Gm24164-201ENSMUST00000093663 104 ntBASIC1.12□□□□□ -2.23
Ufd1P70362 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
Ufd1P70362 Mir767-201ENSMUST00000103256 107 ntBASIC1.11□□□□□ -2.23
Ufd1P70362 Gm11420-201ENSMUST00000120047 402 ntBASIC1.11□□□□□ -2.23
Ufd1P70362 Gm14761-201ENSMUST00000121363 262 ntBASIC1.11□□□□□ -2.23
Ufd1P70362 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.11□□□□□ -2.23
Ufd1P70362 Gm26038-201ENSMUST00000158151 106 ntBASIC1.11□□□□□ -2.23
Ufd1P70362 Gm22663-201ENSMUST00000158721 102 ntBASIC1.11□□□□□ -2.23
Ufd1P70362 Gm23339-201ENSMUST00000158962 139 ntBASIC1.11□□□□□ -2.23
Ufd1P70362 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.11□□□□□ -2.23
Ufd1P70362 Gm25707-201ENSMUST00000175120 96 ntBASIC1.11□□□□□ -2.23
Ufd1P70362 Gm27845-201ENSMUST00000184479 114 ntBASIC1.11□□□□□ -2.23
Ufd1P70362 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.11□□□□□ -2.23
Ufd1P70362 Snord96a-201ENSMUST00000082791 81 ntBASIC1.11□□□□□ -2.23
Ufd1P70362 Snord7-201ENSMUST00000083781 97 ntBASIC1.11□□□□□ -2.23
Ufd1P70362 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC1.11□□□□□ -2.23
Ufd1P70362 Gm12080-201ENSMUST00000119821 1883 ntBASIC1.11□□□□□ -2.23
Ufd1P70362 BC022960-201ENSMUST00000119987 1815 ntBASIC1.1□□□□□ -2.23
Ufd1P70362 Gm24275-201ENSMUST00000116780 146 ntBASIC1.1□□□□□ -2.23
Ufd1P70362 Gm23109-201ENSMUST00000116867 126 ntBASIC1.1□□□□□ -2.23
Ufd1P70362 Gm24629-201ENSMUST00000122762 89 ntBASIC1.1□□□□□ -2.23
Ufd1P70362 Gm22883-201ENSMUST00000157376 106 ntBASIC1.1□□□□□ -2.23
Ufd1P70362 Mir378a-201ENSMUST00000198300 66 ntBASIC1.1□□□□□ -2.23
Ufd1P70362 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC1.1□□□□□ -2.23
Ufd1P70362 AC173482.5-201ENSMUST00000224181 327 ntBASIC1.1□□□□□ -2.23
Ufd1P70362 AC192333.1-201ENSMUST00000224573 376 ntBASIC1.1□□□□□ -2.23
Ufd1P70362 Snord1a-201ENSMUST00000083160 74 ntBASIC1.1□□□□□ -2.23
Ufd1P70362 Gm23245-201ENSMUST00000083370 135 ntBASIC1.1□□□□□ -2.23
Ufd1P70362 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
Ufd1P70362 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
Ufd1P70362 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC1.09□□□□□ -2.23
Ufd1P70362 Mup-ps22-201ENSMUST00000121611 243 ntBASIC1.09□□□□□ -2.23
Ufd1P70362 Gm14491-201ENSMUST00000121919 199 ntBASIC1.09□□□□□ -2.23
Ufd1P70362 Gm24915-201ENSMUST00000157288 78 ntBASIC1.09□□□□□ -2.23
Ufd1P70362 Mir7091-201ENSMUST00000184075 79 ntBASIC1.09□□□□□ -2.23
Ufd1P70362 Mir6917-201ENSMUST00000184111 61 ntBASIC1.09□□□□□ -2.23
Ufd1P70362 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
Ufd1P70362 Mir3535-201ENSMUST00000197651 147 ntBASIC1.09□□□□□ -2.23
Ufd1P70362 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.09□□□□□ -2.23
Ufd1P70362 Mir669d-201ENSMUST00000104644 121 ntBASIC1.08□□□□□ -2.24
Ufd1P70362 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Ufd1P70362 Gm12449-201ENSMUST00000117572 234 ntBASIC1.08□□□□□ -2.24
Ufd1P70362 Gm15002-201ENSMUST00000118406 452 ntBASIC1.08□□□□□ -2.24
Ufd1P70362 Gm24440-201ENSMUST00000157236 63 ntBASIC1.08□□□□□ -2.24
Ufd1P70362 Gm22814-201ENSMUST00000157452 104 ntBASIC1.08□□□□□ -2.24
Ufd1P70362 Gm24512-201ENSMUST00000174963 65 ntBASIC1.08□□□□□ -2.24
Ufd1P70362 Mir3061-201ENSMUST00000175129 91 ntBASIC1.08□□□□□ -2.24
Ufd1P70362 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC1.08□□□□□ -2.24
Ufd1P70362 Gm16399-201ENSMUST00000181423 219 ntBASIC1.08□□□□□ -2.24
Ufd1P70362 Gm27493-201ENSMUST00000184128 78 ntBASIC1.08□□□□□ -2.24
Ufd1P70362 Gm27959-201ENSMUST00000185172 111 ntBASIC1.08□□□□□ -2.24
Ufd1P70362 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC1.08□□□□□ -2.24
Ufd1P70362 Gm19777-201ENSMUST00000191940 358 ntBASIC1.08□□□□□ -2.24
Ufd1P70362 Gm34139-201ENSMUST00000196166 294 ntBASIC1.08□□□□□ -2.24
Ufd1P70362 Mir465d-201ENSMUST00000196314 58 ntBASIC1.08□□□□□ -2.24
Ufd1P70362 Gm43602-201ENSMUST00000196772 300 ntBASIC1.08□□□□□ -2.24
Ufd1P70362 Gm9251-201ENSMUST00000197202 628 ntBASIC1.08□□□□□ -2.24
Ufd1P70362 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC1.08□□□□□ -2.24
Ufd1P70362 Gm22306-201ENSMUST00000082692 107 ntBASIC1.08□□□□□ -2.24
Ufd1P70362 Gm24494-201ENSMUST00000083804 81 ntBASIC1.08□□□□□ -2.24
Ufd1P70362 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Ufd1P70362 Gm23492-201ENSMUST00000116837 115 ntBASIC1.07□□□□□ -2.24
Ufd1P70362 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.07□□□□□ -2.24
Ufd1P70362 Gm24777-201ENSMUST00000157644 107 ntBASIC1.07□□□□□ -2.24
Ufd1P70362 Gm24858-201ENSMUST00000158058 323 ntBASIC1.07□□□□□ -2.24
Ufd1P70362 Mir669n-201ENSMUST00000158636 54 ntBASIC1.07□□□□□ -2.24
Ufd1P70362 Gm25958-201ENSMUST00000175114 71 ntBASIC1.07□□□□□ -2.24
Ufd1P70362 Mir5104-201ENSMUST00000175319 94 ntBASIC1.07□□□□□ -2.24
Ufd1P70362 Mir5118-201ENSMUST00000175551 67 ntBASIC1.07□□□□□ -2.24
Ufd1P70362 Mir7068-201ENSMUST00000183439 74 ntBASIC1.07□□□□□ -2.24
Ufd1P70362 Gm28661-201ENSMUST00000188231 681 ntBASIC1.07□□□□□ -2.24
Ufd1P70362 Gm37763-201ENSMUST00000193445 120 ntBASIC1.07□□□□□ -2.24
Ufd1P70362 Gm44325-201ENSMUST00000196757 77 ntBASIC1.07□□□□□ -2.24
Ufd1P70362 Gm42855-201ENSMUST00000197388 253 ntBASIC1.07□□□□□ -2.24
Ufd1P70362 Gm29818-201ENSMUST00000218070 165 ntBASIC1.07□□□□□ -2.24
Ufd1P70362 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.07□□□□□ -2.24
Ufd1P70362 AC154328.1-201ENSMUST00000225875 307 ntBASIC1.07□□□□□ -2.24
Ufd1P70362 AC163646.2-201ENSMUST00000227962 141 ntBASIC1.07□□□□□ -2.24
Ufd1P70362 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Ufd1P70362 Gm15379-201ENSMUST00000121224 648 ntBASIC1.06□□□□□ -2.24
Ufd1P70362 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 132.9 ms