Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
Cux1P53564 Gm17528-201ENSMUST00000171026 239 ntBASIC-0.01□□□□□ -2.41
Cux1P53564 Gm24518-201ENSMUST00000180275 94 ntBASIC-0.01□□□□□ -2.41
Cux1P53564 AC109212.1-201ENSMUST00000215561 427 ntBASIC-0.01□□□□□ -2.41
Cux1P53564 Gm4746-201ENSMUST00000120395 2406 ntBASIC-0.01□□□□□ -2.41
Cux1P53564 Gm22786-201ENSMUST00000104086 122 ntBASIC-0.02□□□□□ -2.41
Cux1P53564 Gm12779-201ENSMUST00000121496 143 ntBASIC-0.02□□□□□ -2.41
Cux1P53564 Gm25884-201ENSMUST00000157782 62 ntBASIC-0.02□□□□□ -2.41
Cux1P53564 Gm25558-201ENSMUST00000158083 106 ntBASIC-0.02□□□□□ -2.41
Cux1P53564 Gm24549-201ENSMUST00000158647 139 ntBASIC-0.02□□□□□ -2.41
Cux1P53564 Gm17054-201ENSMUST00000169811 259 ntBASIC-0.02□□□□□ -2.41
Cux1P53564 Gm27236-201ENSMUST00000184147 442 ntBASIC-0.02□□□□□ -2.41
Cux1P53564 Gm28414-201ENSMUST00000190111 294 ntBASIC-0.02□□□□□ -2.41
Cux1P53564 Gm10033-201ENSMUST00000072427 1813 ntBASIC-0.02□□□□□ -2.41
Cux1P53564 Gm24172-201ENSMUST00000104127 117 ntBASIC-0.03□□□□□ -2.41
Cux1P53564 Snord49b-201ENSMUST00000082503 72 ntBASIC-0.03□□□□□ -2.41
Cux1P53564 Gm11794-201ENSMUST00000119446 237 ntBASIC-0.03□□□□□ -2.41
Cux1P53564 Gm24306-201ENSMUST00000180229 79 ntBASIC-0.03□□□□□ -2.41
Cux1P53564 Gm45658-201ENSMUST00000209197 580 ntBASIC-0.03□□□□□ -2.41
Cux1P53564 AC154636.2-201ENSMUST00000222538 161 ntBASIC-0.03□□□□□ -2.41
Cux1P53564 AC104832.1-201ENSMUST00000222938 550 ntBASIC-0.03□□□□□ -2.41
Cux1P53564 Gm24625-201ENSMUST00000082622 130 ntBASIC-0.03□□□□□ -2.41
Cux1P53564 Mir382-201ENSMUST00000083494 76 ntBASIC-0.03□□□□□ -2.41
Cux1P53564 Mirlet7d-201ENSMUST00000083519 103 ntBASIC-0.03□□□□□ -2.41
Cux1P53564 Gm22935-201ENSMUST00000103960 104 ntBASIC-0.04□□□□□ -2.42
Cux1P53564 Gm15077-201ENSMUST00000122344 362 ntBASIC-0.04□□□□□ -2.42
Cux1P53564 n-R5s6-201ENSMUST00000122663 88 ntBASIC-0.04□□□□□ -2.42
Cux1P53564 Gm22186-201ENSMUST00000157822 122 ntBASIC-0.04□□□□□ -2.42
Cux1P53564 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC-0.04□□□□□ -2.42
Cux1P53564 AC122769.2-201ENSMUST00000227248 302 ntBASIC-0.04□□□□□ -2.42
Cux1P53564 Gm25475-201ENSMUST00000082825 180 ntBASIC-0.04□□□□□ -2.42
Cux1P53564 Gm25783-201ENSMUST00000122525 190 ntBASIC-0.05□□□□□ -2.42
Cux1P53564 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC-0.05□□□□□ -2.42
Cux1P53564 Gm22239-201ENSMUST00000175220 103 ntBASIC-0.05□□□□□ -2.42
Cux1P53564 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC-0.05□□□□□ -2.42
Cux1P53564 Gm28740-201ENSMUST00000186142 215 ntBASIC-0.05□□□□□ -2.42
Cux1P53564 Gm6003-201ENSMUST00000187903 463 ntBASIC-0.05□□□□□ -2.42
Cux1P53564 Gm29229-201ENSMUST00000188874 323 ntBASIC-0.05□□□□□ -2.42
Cux1P53564 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC-0.05□□□□□ -2.42
Cux1P53564 AC165092.3-201ENSMUST00000223602 282 ntBASIC-0.05□□□□□ -2.42
Cux1P53564 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC-0.05□□□□□ -2.42
Cux1P53564 Gm25896-201ENSMUST00000083713 136 ntBASIC-0.05□□□□□ -2.42
Cux1P53564 Gm24338-201ENSMUST00000104205 127 ntBASIC-0.06□□□□□ -2.42
Cux1P53564 Gm22489-201ENSMUST00000116813 62 ntBASIC-0.06□□□□□ -2.42
Cux1P53564 Gm18417-201ENSMUST00000176564 648 ntBASIC-0.06□□□□□ -2.42
Cux1P53564 Gm23568-201ENSMUST00000177960 92 ntBASIC-0.06□□□□□ -2.42
Cux1P53564 Gm24829-201ENSMUST00000179245 92 ntBASIC-0.06□□□□□ -2.42
Cux1P53564 Gm27313-201ENSMUST00000183500 142 ntBASIC-0.06□□□□□ -2.42
Cux1P53564 Gm44325-201ENSMUST00000196757 77 ntBASIC-0.06□□□□□ -2.42
Cux1P53564 Gm42475-201ENSMUST00000201212 295 ntBASIC-0.06□□□□□ -2.42
Cux1P53564 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC-0.06□□□□□ -2.42
Cux1P53564 AC130821.1-201ENSMUST00000221997 293 ntBASIC-0.06□□□□□ -2.42
Cux1P53564 Gm14989-201ENSMUST00000120497 207 ntBASIC-0.07□□□□□ -2.42
Cux1P53564 Gm22281-201ENSMUST00000157198 103 ntBASIC-0.07□□□□□ -2.42
Cux1P53564 Mir1961-201ENSMUST00000158643 112 ntBASIC-0.07□□□□□ -2.42
Cux1P53564 Gm22914-201ENSMUST00000175195 77 ntBASIC-0.07□□□□□ -2.42
Cux1P53564 Gm29350-201ENSMUST00000189141 541 ntBASIC-0.07□□□□□ -2.42
Cux1P53564 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC-0.07□□□□□ -2.42
Cux1P53564 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC-0.07□□□□□ -2.42
Cux1P53564 Gm22368-201ENSMUST00000102416 109 ntBASIC-0.08□□□□□ -2.42
Cux1P53564 Gm14400-201ENSMUST00000117234 2135 ntBASIC-0.08□□□□□ -2.42
Cux1P53564 Gm24596-201ENSMUST00000122504 107 ntBASIC-0.08□□□□□ -2.42
Cux1P53564 Gm24584-201ENSMUST00000157972 107 ntBASIC-0.08□□□□□ -2.42
Cux1P53564 Gm22328-201ENSMUST00000158074 112 ntBASIC-0.08□□□□□ -2.42
Cux1P53564 Gm22764-201ENSMUST00000158370 92 ntBASIC-0.08□□□□□ -2.42
Cux1P53564 Gm23853-201ENSMUST00000158375 104 ntBASIC-0.08□□□□□ -2.42
Cux1P53564 Gm10177-202ENSMUST00000161698 207 ntBASIC-0.08□□□□□ -2.42
Cux1P53564 Gm25211-201ENSMUST00000177553 107 ntBASIC-0.08□□□□□ -2.42
Cux1P53564 Gm25245-201ENSMUST00000178139 107 ntBASIC-0.08□□□□□ -2.42
Cux1P53564 Gm26245-201ENSMUST00000178491 107 ntBASIC-0.08□□□□□ -2.42
Cux1P53564 Gm23610-201ENSMUST00000178659 107 ntBASIC-0.08□□□□□ -2.42
Cux1P53564 Gm25101-201ENSMUST00000179057 107 ntBASIC-0.08□□□□□ -2.42
Cux1P53564 Gm23712-201ENSMUST00000179713 107 ntBASIC-0.08□□□□□ -2.42
Cux1P53564 Gm25173-201ENSMUST00000179794 107 ntBASIC-0.08□□□□□ -2.42
Cux1P53564 Gm24870-201ENSMUST00000179897 107 ntBASIC-0.08□□□□□ -2.42
Cux1P53564 Gm22645-201ENSMUST00000180010 107 ntBASIC-0.08□□□□□ -2.42
Cux1P53564 Gm24565-201ENSMUST00000180099 107 ntBASIC-0.08□□□□□ -2.42
Cux1P53564 Gm23805-201ENSMUST00000180129 107 ntBASIC-0.08□□□□□ -2.42
Cux1P53564 Gm25327-201ENSMUST00000180263 107 ntBASIC-0.08□□□□□ -2.42
Cux1P53564 Gm27735-201ENSMUST00000185085 76 ntBASIC-0.08□□□□□ -2.42
Cux1P53564 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC-0.08□□□□□ -2.42
Cux1P53564 Gm37128-201ENSMUST00000192599 232 ntBASIC-0.08□□□□□ -2.42
Cux1P53564 AC120553.1-201ENSMUST00000227313 260 ntBASIC-0.08□□□□□ -2.42
Cux1P53564 Gm23629-201ENSMUST00000082465 107 ntBASIC-0.08□□□□□ -2.42
Cux1P53564 Gm22749-201ENSMUST00000082490 107 ntBASIC-0.08□□□□□ -2.42
Cux1P53564 Gm22747-201ENSMUST00000082495 107 ntBASIC-0.08□□□□□ -2.42
Cux1P53564 Gm22063-201ENSMUST00000082560 107 ntBASIC-0.08□□□□□ -2.42
Cux1P53564 Gm23057-201ENSMUST00000082801 107 ntBASIC-0.08□□□□□ -2.42
Cux1P53564 Gm23055-201ENSMUST00000082805 94 ntBASIC-0.08□□□□□ -2.42
Cux1P53564 Snord82-201ENSMUST00000082889 70 ntBASIC-0.08□□□□□ -2.42
Cux1P53564 Gm26324-201ENSMUST00000083073 107 ntBASIC-0.08□□□□□ -2.42
Cux1P53564 Gm24535-201ENSMUST00000083140 107 ntBASIC-0.08□□□□□ -2.42
Cux1P53564 Gm26127-201ENSMUST00000083193 107 ntBASIC-0.08□□□□□ -2.42
Cux1P53564 Gm24456-201ENSMUST00000083198 107 ntBASIC-0.08□□□□□ -2.42
Cux1P53564 Gm25577-201ENSMUST00000083414 107 ntBASIC-0.08□□□□□ -2.42
Cux1P53564 Gm24861-201ENSMUST00000083459 107 ntBASIC-0.08□□□□□ -2.42
Cux1P53564 Gm23103-201ENSMUST00000083725 107 ntBASIC-0.08□□□□□ -2.42
Cux1P53564 Gm23732-201ENSMUST00000083751 107 ntBASIC-0.08□□□□□ -2.42
Cux1P53564 Gm23503-201ENSMUST00000083903 107 ntBASIC-0.08□□□□□ -2.42
Cux1P53564 Gm22352-201ENSMUST00000083917 107 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 76,532 protein–RNA pairs in 95.9 ms