Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm23203-201ENSMUST00000104374 107 ntBASIC0.38□□□□□ -2.35
Cdx2P43241 Gm12433-201ENSMUST00000119659 255 ntBASIC0.38□□□□□ -2.35
Cdx2P43241 Gm6985-201ENSMUST00000121255 271 ntBASIC0.38□□□□□ -2.35
Cdx2P43241 Gm23352-201ENSMUST00000158428 64 ntBASIC0.38□□□□□ -2.35
Cdx2P43241 Gm24678-201ENSMUST00000158756 104 ntBASIC0.38□□□□□ -2.35
Cdx2P43241 Gm23523-201ENSMUST00000180190 107 ntBASIC0.38□□□□□ -2.35
Cdx2P43241 Gm27236-201ENSMUST00000184147 442 ntBASIC0.38□□□□□ -2.35
Cdx2P43241 Gm28917-201ENSMUST00000187294 237 ntBASIC0.38□□□□□ -2.35
Cdx2P43241 Gm28766-201ENSMUST00000191086 234 ntBASIC0.38□□□□□ -2.35
Cdx2P43241 Gm44325-201ENSMUST00000196757 77 ntBASIC0.38□□□□□ -2.35
Cdx2P43241 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC0.38□□□□□ -2.35
Cdx2P43241 Gm44923-201ENSMUST00000206673 85 ntBASIC0.38□□□□□ -2.35
Cdx2P43241 AC163033.1-201ENSMUST00000218608 157 ntBASIC0.38□□□□□ -2.35
Cdx2P43241 AC154424.1-201ENSMUST00000225883 799 ntBASIC0.38□□□□□ -2.35
Cdx2P43241 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
Cdx2P43241 Mir155-201ENSMUST00000083463 65 ntBASIC0.38□□□□□ -2.35
Cdx2P43241 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.38□□□□□ -2.35
Cdx2P43241 AC154515.1-201ENSMUST00000226085 2841 ntBASIC0.37□□□□□ -2.35
Cdx2P43241 Mir669f-201ENSMUST00000103850 121 ntBASIC0.37□□□□□ -2.35
Cdx2P43241 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
Cdx2P43241 Gm23542-201ENSMUST00000158208 96 ntBASIC0.37□□□□□ -2.35
Cdx2P43241 Gm22088-201ENSMUST00000158341 117 ntBASIC0.37□□□□□ -2.35
Cdx2P43241 Gm25750-201ENSMUST00000175483 112 ntBASIC0.37□□□□□ -2.35
Cdx2P43241 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC0.37□□□□□ -2.35
Cdx2P43241 Gm28661-201ENSMUST00000188231 681 ntBASIC0.37□□□□□ -2.35
Cdx2P43241 Gm37641-201ENSMUST00000193837 239 ntBASIC0.37□□□□□ -2.35
Cdx2P43241 Gm44135-201ENSMUST00000205221 368 ntBASIC0.37□□□□□ -2.35
Cdx2P43241 Gm44976-201ENSMUST00000205543 261 ntBASIC0.37□□□□□ -2.35
Cdx2P43241 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
Cdx2P43241 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.37□□□□□ -2.35
Cdx2P43241 Gm23969-201ENSMUST00000083324 74 ntBASIC0.37□□□□□ -2.35
Cdx2P43241 Gm37642-201ENSMUST00000193166 1735 ntBASIC0.36□□□□□ -2.35
Cdx2P43241 Gm23130-201ENSMUST00000104252 74 ntBASIC0.36□□□□□ -2.35
Cdx2P43241 n-R5s63-201ENSMUST00000122756 103 ntBASIC0.36□□□□□ -2.35
Cdx2P43241 Gm22796-201ENSMUST00000157234 106 ntBASIC0.36□□□□□ -2.35
Cdx2P43241 Gm24476-201ENSMUST00000157437 131 ntBASIC0.36□□□□□ -2.35
Cdx2P43241 Gm23994-201ENSMUST00000158059 88 ntBASIC0.36□□□□□ -2.35
Cdx2P43241 Gm23025-201ENSMUST00000158769 111 ntBASIC0.36□□□□□ -2.35
Cdx2P43241 Mir15a-201ENSMUST00000175266 84 ntBASIC0.36□□□□□ -2.35
Cdx2P43241 Gm22802-201ENSMUST00000175621 89 ntBASIC0.36□□□□□ -2.35
Cdx2P43241 Gm27385-201ENSMUST00000184747 104 ntBASIC0.36□□□□□ -2.35
Cdx2P43241 Gm28435-201ENSMUST00000185496 108 ntBASIC0.36□□□□□ -2.35
Cdx2P43241 Gm44465-201ENSMUST00000199536 114 ntBASIC0.36□□□□□ -2.35
Cdx2P43241 Gm44921-201ENSMUST00000205290 301 ntBASIC0.36□□□□□ -2.35
Cdx2P43241 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC0.36□□□□□ -2.35
Cdx2P43241 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.36□□□□□ -2.35
Cdx2P43241 Gm26066-201ENSMUST00000083385 109 ntBASIC0.36□□□□□ -2.35
Cdx2P43241 Gm25513-201ENSMUST00000083861 162 ntBASIC0.36□□□□□ -2.35
Cdx2P43241 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
Cdx2P43241 Gm22759-201ENSMUST00000102276 96 ntBASIC0.35□□□□□ -2.35
Cdx2P43241 Mir872-201ENSMUST00000104728 81 ntBASIC0.35□□□□□ -2.35
Cdx2P43241 Gm11254-201ENSMUST00000122368 653 ntBASIC0.35□□□□□ -2.35
Cdx2P43241 Gm22631-201ENSMUST00000179656 94 ntBASIC0.35□□□□□ -2.35
Cdx2P43241 Gm37918-201ENSMUST00000192071 120 ntBASIC0.35□□□□□ -2.35
Cdx2P43241 Gm34783-201ENSMUST00000209159 303 ntBASIC0.35□□□□□ -2.35
Cdx2P43241 Gm45815-201ENSMUST00000220241 146 ntBASIC0.35□□□□□ -2.35
Cdx2P43241 AC130821.1-201ENSMUST00000221997 293 ntBASIC0.35□□□□□ -2.35
Cdx2P43241 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.35□□□□□ -2.35
Cdx2P43241 Snord68-201ENSMUST00000082516 86 ntBASIC0.35□□□□□ -2.35
Cdx2P43241 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC0.34□□□□□ -2.36
Cdx2P43241 Gm12143-201ENSMUST00000119666 332 ntBASIC0.34□□□□□ -2.36
Cdx2P43241 Defb44-ps-201ENSMUST00000126871 219 ntBASIC0.34□□□□□ -2.36
Cdx2P43241 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
Cdx2P43241 Gm23411-201ENSMUST00000157988 62 ntBASIC0.34□□□□□ -2.36
Cdx2P43241 Gm26200-201ENSMUST00000180273 79 ntBASIC0.34□□□□□ -2.36
Cdx2P43241 Gm38261-201ENSMUST00000192608 316 ntBASIC0.34□□□□□ -2.36
Cdx2P43241 AC125167.1-201ENSMUST00000198698 141 ntBASIC0.34□□□□□ -2.36
Cdx2P43241 Gm44142-201ENSMUST00000203358 311 ntBASIC0.34□□□□□ -2.36
Cdx2P43241 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.34□□□□□ -2.36
Cdx2P43241 AC133079.1-201ENSMUST00000220943 1881 ntBASIC0.34□□□□□ -2.36
Cdx2P43241 AC173345.2-201ENSMUST00000222795 153 ntBASIC0.34□□□□□ -2.36
Cdx2P43241 AC162934.3-201ENSMUST00000223015 841 ntBASIC0.34□□□□□ -2.36
Cdx2P43241 AC183092.1-201ENSMUST00000224301 153 ntBASIC0.34□□□□□ -2.36
Cdx2P43241 DQ267101-201ENSMUST00000082562 73 ntBASIC0.34□□□□□ -2.36
Cdx2P43241 Gm22704-201ENSMUST00000083027 137 ntBASIC0.34□□□□□ -2.36
Cdx2P43241 Gm25138-201ENSMUST00000083248 136 ntBASIC0.34□□□□□ -2.36
Cdx2P43241 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.34□□□□□ -2.36
Cdx2P43241 Gm25497-201ENSMUST00000104425 132 ntBASIC0.33□□□□□ -2.36
Cdx2P43241 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC0.33□□□□□ -2.36
Cdx2P43241 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC0.33□□□□□ -2.36
Cdx2P43241 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.33□□□□□ -2.36
Cdx2P43241 Gm22522-201ENSMUST00000158271 151 ntBASIC0.33□□□□□ -2.36
Cdx2P43241 Gm23145-201ENSMUST00000178912 79 ntBASIC0.33□□□□□ -2.36
Cdx2P43241 Gm28408-201ENSMUST00000191557 463 ntBASIC0.33□□□□□ -2.36
Cdx2P43241 Gm43220-201ENSMUST00000199299 282 ntBASIC0.33□□□□□ -2.36
Cdx2P43241 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.33□□□□□ -2.36
Cdx2P43241 AL929265.1-201ENSMUST00000213427 125 ntBASIC0.33□□□□□ -2.36
Cdx2P43241 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
Cdx2P43241 Gm23055-201ENSMUST00000082805 94 ntBASIC0.33□□□□□ -2.36
Cdx2P43241 Gm25378-201ENSMUST00000104333 129 ntBASIC0.32□□□□□ -2.36
Cdx2P43241 Gm23531-201ENSMUST00000104567 68 ntBASIC0.32□□□□□ -2.36
Cdx2P43241 Gm24467-201ENSMUST00000157887 126 ntBASIC0.32□□□□□ -2.36
Cdx2P43241 Gm23278-201ENSMUST00000157911 143 ntBASIC0.32□□□□□ -2.36
Cdx2P43241 Gm26484-201ENSMUST00000158018 106 ntBASIC0.32□□□□□ -2.36
Cdx2P43241 Gm24005-201ENSMUST00000158459 296 ntBASIC0.32□□□□□ -2.36
Cdx2P43241 Gm27313-201ENSMUST00000183500 142 ntBASIC0.32□□□□□ -2.36
Cdx2P43241 Gm28921-201ENSMUST00000190219 378 ntBASIC0.32□□□□□ -2.36
Cdx2P43241 Gm28992-201ENSMUST00000190534 139 ntBASIC0.32□□□□□ -2.36
Cdx2P43241 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.32□□□□□ -2.36
Cdx2P43241 Gm45403-201ENSMUST00000209453 276 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 168.2 ms