Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm16373-201ENSMUST00000129517 303 ntBASIC-0.75□□□□□ -2.53
HttP42859 Gm25637-201ENSMUST00000157529 107 ntBASIC-0.75□□□□□ -2.53
HttP42859 Gm22769-201ENSMUST00000158367 98 ntBASIC-0.75□□□□□ -2.53
HttP42859 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC-0.75□□□□□ -2.53
HttP42859 Gm26195-201ENSMUST00000175035 101 ntBASIC-0.75□□□□□ -2.53
HttP42859 Gm44491-201ENSMUST00000196794 96 ntBASIC-0.75□□□□□ -2.53
HttP42859 Gm44041-201ENSMUST00000203678 396 ntBASIC-0.75□□□□□ -2.53
HttP42859 Gm5010-201ENSMUST00000213131 260 ntBASIC-0.75□□□□□ -2.53
HttP42859 AC159203.2-201ENSMUST00000221326 193 ntBASIC-0.75□□□□□ -2.53
HttP42859 AC133654.1-201ENSMUST00000228411 672 ntBASIC-0.75□□□□□ -2.53
HttP42859 Gm22091-201ENSMUST00000116908 127 ntBASIC-0.76□□□□□ -2.53
HttP42859 n-R5s39-201ENSMUST00000122613 108 ntBASIC-0.76□□□□□ -2.53
HttP42859 Gm23317-201ENSMUST00000157999 129 ntBASIC-0.76□□□□□ -2.53
HttP42859 Gm23199-201ENSMUST00000158812 107 ntBASIC-0.76□□□□□ -2.53
HttP42859 Mir6339-201ENSMUST00000185120 117 ntBASIC-0.76□□□□□ -2.53
HttP42859 Gm37709-201ENSMUST00000195074 600 ntBASIC-0.76□□□□□ -2.53
HttP42859 Gm24977-201ENSMUST00000083106 163 ntBASIC-0.76□□□□□ -2.53
HttP42859 Gm24276-201ENSMUST00000102181 110 ntBASIC-0.76□□□□□ -2.53
HttP42859 Gm22221-201ENSMUST00000157362 103 ntBASIC-0.76□□□□□ -2.53
HttP42859 Gm24634-201ENSMUST00000158672 107 ntBASIC-0.76□□□□□ -2.53
HttP42859 Mir100-201ENSMUST00000175270 80 ntBASIC-0.76□□□□□ -2.53
HttP42859 Gm23416-201ENSMUST00000175520 95 ntBASIC-0.76□□□□□ -2.53
HttP42859 Gm42924-201ENSMUST00000197261 185 ntBASIC-0.76□□□□□ -2.53
HttP42859 Gm44602-201ENSMUST00000205948 132 ntBASIC-0.76□□□□□ -2.53
HttP42859 Gm45429-201ENSMUST00000209527 172 ntBASIC-0.76□□□□□ -2.53
HttP42859 CT030662.3-201ENSMUST00000228751 476 ntBASIC-0.76□□□□□ -2.53
HttP42859 Gm26339-201ENSMUST00000102368 99 ntBASIC-0.77□□□□□ -2.53
HttP42859 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC-0.77□□□□□ -2.53
HttP42859 Gm26430-201ENSMUST00000178054 107 ntBASIC-0.77□□□□□ -2.53
HttP42859 Gm29352-201ENSMUST00000188054 544 ntBASIC-0.77□□□□□ -2.53
HttP42859 Gm45557-201ENSMUST00000210004 1651 ntBASIC-0.77□□□□□ -2.53
HttP42859 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC-0.77□□□□□ -2.53
HttP42859 Gm22611-201ENSMUST00000158288 150 ntBASIC-0.77□□□□□ -2.53
HttP42859 Gm10177-202ENSMUST00000161698 207 ntBASIC-0.77□□□□□ -2.53
HttP42859 Gm22914-201ENSMUST00000175195 77 ntBASIC-0.77□□□□□ -2.53
HttP42859 Mir3112-201ENSMUST00000175431 82 ntBASIC-0.77□□□□□ -2.53
HttP42859 Gm24108-201ENSMUST00000175495 77 ntBASIC-0.77□□□□□ -2.53
HttP42859 Gm25525-201ENSMUST00000177701 107 ntBASIC-0.77□□□□□ -2.53
HttP42859 Mir6335-201ENSMUST00000184081 98 ntBASIC-0.77□□□□□ -2.53
HttP42859 AC153522.1-201ENSMUST00000220047 1090 ntBASIC-0.77□□□□□ -2.53
HttP42859 AC115735.2-201ENSMUST00000227135 351 ntBASIC-0.77□□□□□ -2.53
HttP42859 Gm22169-201ENSMUST00000083229 107 ntBASIC-0.77□□□□□ -2.53
HttP42859 Gm22971-201ENSMUST00000083305 97 ntBASIC-0.77□□□□□ -2.53
HttP42859 Gm12045-201ENSMUST00000122122 573 ntBASIC-0.78□□□□□ -2.53
HttP42859 Gm14903-201ENSMUST00000122435 537 ntBASIC-0.78□□□□□ -2.53
HttP42859 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC-0.78□□□□□ -2.53
HttP42859 Gm23473-201ENSMUST00000158883 116 ntBASIC-0.78□□□□□ -2.53
HttP42859 Gm28191-201ENSMUST00000189112 211 ntBASIC-0.78□□□□□ -2.53
HttP42859 AC101677.1-201ENSMUST00000218590 158 ntBASIC-0.78□□□□□ -2.53
HttP42859 Mir302c-201ENSMUST00000083548 68 ntBASIC-0.78□□□□□ -2.53
HttP42859 Mir350-201ENSMUST00000083639 99 ntBASIC-0.78□□□□□ -2.53
HttP42859 Mir18b-201ENSMUST00000103923 83 ntBASIC-0.78□□□□□ -2.53
HttP42859 Gm11794-201ENSMUST00000119446 237 ntBASIC-0.78□□□□□ -2.53
HttP42859 Mir3473d-201ENSMUST00000175346 81 ntBASIC-0.78□□□□□ -2.53
HttP42859 Mir5124b-201ENSMUST00000184251 85 ntBASIC-0.78□□□□□ -2.53
HttP42859 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC-0.78□□□□□ -2.53
HttP42859 Gm25257-201ENSMUST00000083907 110 ntBASIC-0.78□□□□□ -2.53
HttP42859 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC-0.78□□□□□ -2.53
HttP42859 AC168056.1-201ENSMUST00000225270 180 ntBASIC-0.78□□□□□ -2.53
HttP42859 Gm25894-201ENSMUST00000083458 75 ntBASIC-0.78□□□□□ -2.53
HttP42859 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC-0.79□□□□□ -2.54
HttP42859 Gm22226-201ENSMUST00000157355 109 ntBASIC-0.79□□□□□ -2.54
HttP42859 Gm25472-201ENSMUST00000175454 78 ntBASIC-0.79□□□□□ -2.54
HttP42859 Gm44375-201ENSMUST00000196657 150 ntBASIC-0.79□□□□□ -2.54
HttP42859 Igkv13-82-201ENSMUST00000200308 346 ntBASIC-0.79□□□□□ -2.54
HttP42859 Gm24005-201ENSMUST00000158459 296 ntBASIC-0.79□□□□□ -2.54
HttP42859 Gm22887-201ENSMUST00000178586 107 ntBASIC-0.79□□□□□ -2.54
HttP42859 Gm28412-201ENSMUST00000187243 177 ntBASIC-0.79□□□□□ -2.54
HttP42859 Gm42516-201ENSMUST00000198691 767 ntBASIC-0.79□□□□□ -2.54
HttP42859 AC116465.1-201ENSMUST00000220324 235 ntBASIC-0.79□□□□□ -2.54
HttP42859 AC154257.2-201ENSMUST00000224166 340 ntBASIC-0.79□□□□□ -2.54
HttP42859 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC-0.79□□□□□ -2.54
HttP42859 Gm22827-201ENSMUST00000083766 107 ntBASIC-0.79□□□□□ -2.54
HttP42859 Gm23024-201ENSMUST00000158770 292 ntBASIC-0.8□□□□□ -2.54
HttP42859 Gm24390-201ENSMUST00000179578 62 ntBASIC-0.8□□□□□ -2.54
HttP42859 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC-0.8□□□□□ -2.54
HttP42859 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC-0.8□□□□□ -2.54
HttP42859 AC122225.1-201ENSMUST00000215641 369 ntBASIC-0.8□□□□□ -2.54
HttP42859 Gm24455-201ENSMUST00000083348 131 ntBASIC-0.8□□□□□ -2.54
HttP42859 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC-0.8□□□□□ -2.54
HttP42859 Gm14417-201ENSMUST00000120036 1074 ntBASIC-0.8□□□□□ -2.54
HttP42859 Gm23542-201ENSMUST00000158208 96 ntBASIC-0.8□□□□□ -2.54
HttP42859 Gm24547-201ENSMUST00000158649 149 ntBASIC-0.8□□□□□ -2.54
HttP42859 Gm44948-201ENSMUST00000209050 149 ntBASIC-0.8□□□□□ -2.54
HttP42859 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC-0.8□□□□□ -2.54
HttP42859 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC-0.8□□□□□ -2.54
HttP42859 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC-0.8□□□□□ -2.54
HttP42859 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC-0.8□□□□□ -2.54
HttP42859 Gm9472-201ENSMUST00000221625 526 ntBASIC-0.8□□□□□ -2.54
HttP42859 AC135292.1-201ENSMUST00000227665 204 ntBASIC-0.8□□□□□ -2.54
HttP42859 Gm26071-201ENSMUST00000083261 107 ntBASIC-0.8□□□□□ -2.54
HttP42859 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC-0.81□□□□□ -2.54
HttP42859 Gm19032-201ENSMUST00000208584 592 ntBASIC-0.81□□□□□ -2.54
HttP42859 AC125523.1-201ENSMUST00000228018 934 ntBASIC-0.81□□□□□ -2.54
HttP42859 Mir490-201ENSMUST00000093567 84 ntBASIC-0.81□□□□□ -2.54
HttP42859 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC-0.81□□□□□ -2.54
HttP42859 Mir654-201ENSMUST00000104787 84 ntBASIC-0.81□□□□□ -2.54
HttP42859 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC-0.81□□□□□ -2.54
HttP42859 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC-0.81□□□□□ -2.54
HttP42859 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC-0.81□□□□□ -2.54
Retrieved 100 of 76,532 protein–RNA pairs in 173.1 ms