Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 AC183092.1-201ENSMUST00000224301 153 ntBASIC0.66□□□□□ -2.3
VhlP40338 Gm22685-201ENSMUST00000082848 106 ntBASIC0.66□□□□□ -2.3
VhlP40338 Gm24037-201ENSMUST00000082871 180 ntBASIC0.66□□□□□ -2.3
VhlP40338 Snord1a-201ENSMUST00000083160 74 ntBASIC0.66□□□□□ -2.3
VhlP40338 Mir10b-201ENSMUST00000083566 68 ntBASIC0.66□□□□□ -2.3
VhlP40338 Gm26164-201ENSMUST00000083793 104 ntBASIC0.66□□□□□ -2.3
VhlP40338 Gm24494-201ENSMUST00000083804 81 ntBASIC0.66□□□□□ -2.3
VhlP40338 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
VhlP40338 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
VhlP40338 Gm22935-201ENSMUST00000103960 104 ntBASIC0.65□□□□□ -2.31
VhlP40338 Gm23836-201ENSMUST00000104434 129 ntBASIC0.65□□□□□ -2.31
VhlP40338 Gm14980-201ENSMUST00000121247 736 ntBASIC0.65□□□□□ -2.31
VhlP40338 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC0.65□□□□□ -2.31
VhlP40338 Gm26038-201ENSMUST00000158151 106 ntBASIC0.65□□□□□ -2.31
VhlP40338 Gm22113-201ENSMUST00000158343 104 ntBASIC0.65□□□□□ -2.31
VhlP40338 Cfap61-214ENSMUST00000167179 183 ntBASIC0.65□□□□□ -2.31
VhlP40338 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC0.65□□□□□ -2.31
VhlP40338 Gm24487-201ENSMUST00000178017 63 ntBASIC0.65□□□□□ -2.31
VhlP40338 Gm23660-201ENSMUST00000178362 79 ntBASIC0.65□□□□□ -2.31
VhlP40338 Gm24799-201ENSMUST00000178431 79 ntBASIC0.65□□□□□ -2.31
VhlP40338 Gm24088-201ENSMUST00000179100 79 ntBASIC0.65□□□□□ -2.31
VhlP40338 Gm28992-201ENSMUST00000190534 139 ntBASIC0.65□□□□□ -2.31
VhlP40338 Gm18291-201ENSMUST00000190791 301 ntBASIC0.65□□□□□ -2.31
VhlP40338 Gm37918-201ENSMUST00000192071 120 ntBASIC0.65□□□□□ -2.31
VhlP40338 Gm34139-201ENSMUST00000196166 294 ntBASIC0.65□□□□□ -2.31
VhlP40338 AC164086.1-201ENSMUST00000221038 289 ntBASIC0.65□□□□□ -2.31
VhlP40338 AC154328.1-201ENSMUST00000225875 307 ntBASIC0.65□□□□□ -2.31
VhlP40338 AC151833.1-201ENSMUST00000227752 574 ntBASIC0.65□□□□□ -2.31
VhlP40338 Gm24152-201ENSMUST00000082764 163 ntBASIC0.65□□□□□ -2.31
VhlP40338 Gm24355-201ENSMUST00000082858 122 ntBASIC0.65□□□□□ -2.31
VhlP40338 Gm14917-201ENSMUST00000118872 2105 ntBASIC0.65□□□□□ -2.31
VhlP40338 Gm22785-201ENSMUST00000104087 132 ntBASIC0.64□□□□□ -2.31
VhlP40338 Gm14296-202ENSMUST00000108931 750 ntBASIC0.64□□□□□ -2.31
VhlP40338 Gm12449-201ENSMUST00000117572 234 ntBASIC0.64□□□□□ -2.31
VhlP40338 Gm11859-201ENSMUST00000118099 455 ntBASIC0.64□□□□□ -2.31
VhlP40338 Gm14782-201ENSMUST00000120151 195 ntBASIC0.64□□□□□ -2.31
VhlP40338 Gm13967-201ENSMUST00000120404 380 ntBASIC0.64□□□□□ -2.31
VhlP40338 Gm14922-201ENSMUST00000121131 163 ntBASIC0.64□□□□□ -2.31
VhlP40338 Gm25909-201ENSMUST00000157619 121 ntBASIC0.64□□□□□ -2.31
VhlP40338 Gm24853-201ENSMUST00000158026 121 ntBASIC0.64□□□□□ -2.31
VhlP40338 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC0.64□□□□□ -2.31
VhlP40338 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC0.64□□□□□ -2.31
VhlP40338 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC0.64□□□□□ -2.31
VhlP40338 Gm22929-201ENSMUST00000175517 107 ntBASIC0.64□□□□□ -2.31
VhlP40338 Gm23419-201ENSMUST00000175523 84 ntBASIC0.64□□□□□ -2.31
VhlP40338 Gm23191-201ENSMUST00000179147 107 ntBASIC0.64□□□□□ -2.31
VhlP40338 Gm17067-202ENSMUST00000180131 123 ntBASIC0.64□□□□□ -2.31
VhlP40338 Gm27539-201ENSMUST00000184971 224 ntBASIC0.64□□□□□ -2.31
VhlP40338 Gm37801-201ENSMUST00000194754 274 ntBASIC0.64□□□□□ -2.31
VhlP40338 CT025526.1-201ENSMUST00000217327 267 ntBASIC0.64□□□□□ -2.31
VhlP40338 Gm23735-201ENSMUST00000082551 134 ntBASIC0.64□□□□□ -2.31
VhlP40338 Gm12080-201ENSMUST00000119821 1883 ntBASIC0.64□□□□□ -2.31
VhlP40338 AC154515.1-201ENSMUST00000226085 2841 ntBASIC0.64□□□□□ -2.31
VhlP40338 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC0.63□□□□□ -2.31
VhlP40338 Gm22279-201ENSMUST00000157200 93 ntBASIC0.63□□□□□ -2.31
VhlP40338 Gm22555-201ENSMUST00000157801 62 ntBASIC0.63□□□□□ -2.31
VhlP40338 Gm25044-201ENSMUST00000158603 104 ntBASIC0.63□□□□□ -2.31
VhlP40338 Gm23022-201ENSMUST00000158768 180 ntBASIC0.63□□□□□ -2.31
VhlP40338 Gm20386-201ENSMUST00000174010 132 ntBASIC0.63□□□□□ -2.31
VhlP40338 Mir3061-201ENSMUST00000175129 91 ntBASIC0.63□□□□□ -2.31
VhlP40338 Gm27410-201ENSMUST00000183851 115 ntBASIC0.63□□□□□ -2.31
VhlP40338 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC0.63□□□□□ -2.31
VhlP40338 Gm43220-201ENSMUST00000199299 282 ntBASIC0.63□□□□□ -2.31
VhlP40338 AC164161.1-201ENSMUST00000214076 639 ntBASIC0.63□□□□□ -2.31
VhlP40338 AL935138.1-201ENSMUST00000215309 196 ntBASIC0.63□□□□□ -2.31
VhlP40338 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC0.63□□□□□ -2.31
VhlP40338 AC131720.2-201ENSMUST00000220420 431 ntBASIC0.63□□□□□ -2.31
VhlP40338 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC0.63□□□□□ -2.31
VhlP40338 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC0.63□□□□□ -2.31
VhlP40338 CT485612.2-201ENSMUST00000223014 151 ntBASIC0.63□□□□□ -2.31
VhlP40338 Gm24966-201ENSMUST00000082443 79 ntBASIC0.63□□□□□ -2.31
VhlP40338 Gm25789-201ENSMUST00000083294 76 ntBASIC0.63□□□□□ -2.31
VhlP40338 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC0.63□□□□□ -2.31
VhlP40338 Gm42718-201ENSMUST00000197319 2681 ntBASIC0.62□□□□□ -2.31
VhlP40338 Gm10033-201ENSMUST00000072427 1813 ntBASIC0.62□□□□□ -2.31
VhlP40338 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
VhlP40338 Gm25805-201ENSMUST00000122788 108 ntBASIC0.62□□□□□ -2.31
VhlP40338 Defb44-ps-201ENSMUST00000126871 219 ntBASIC0.62□□□□□ -2.31
VhlP40338 Gm25166-201ENSMUST00000158909 111 ntBASIC0.62□□□□□ -2.31
VhlP40338 Mir5104-201ENSMUST00000175319 94 ntBASIC0.62□□□□□ -2.31
VhlP40338 Gm20630-201ENSMUST00000177387 551 ntBASIC0.62□□□□□ -2.31
VhlP40338 Gm20257-202ENSMUST00000188643 130 ntBASIC0.62□□□□□ -2.31
VhlP40338 Gm44387-201ENSMUST00000196298 145 ntBASIC0.62□□□□□ -2.31
VhlP40338 Gm42855-201ENSMUST00000197388 253 ntBASIC0.62□□□□□ -2.31
VhlP40338 AC164612.2-202ENSMUST00000216314 253 ntBASIC0.62□□□□□ -2.31
VhlP40338 AC098718.1-201ENSMUST00000226166 175 ntBASIC0.62□□□□□ -2.31
VhlP40338 Gm25513-201ENSMUST00000083861 162 ntBASIC0.62□□□□□ -2.31
VhlP40338 Gm15102-201ENSMUST00000118740 1502 ntBASIC0.62□□□□□ -2.31
VhlP40338 Gm15101-201ENSMUST00000178818 1502 ntBASIC0.62□□□□□ -2.31
VhlP40338 Mir669p-2-201ENSMUST00000103868 87 ntBASIC0.61□□□□□ -2.31
VhlP40338 Mir669p-1-201ENSMUST00000103884 87 ntBASIC0.61□□□□□ -2.31
VhlP40338 Gm24588-201ENSMUST00000116696 83 ntBASIC0.61□□□□□ -2.31
VhlP40338 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
VhlP40338 Gm22447-201ENSMUST00000158155 92 ntBASIC0.61□□□□□ -2.31
VhlP40338 Gm25434-201ENSMUST00000158278 167 ntBASIC0.61□□□□□ -2.31
VhlP40338 Gm24810-201ENSMUST00000175317 70 ntBASIC0.61□□□□□ -2.31
VhlP40338 Gm23355-201ENSMUST00000177614 107 ntBASIC0.61□□□□□ -2.31
VhlP40338 Gm42719-201ENSMUST00000197393 355 ntBASIC0.61□□□□□ -2.31
VhlP40338 Gm44490-201ENSMUST00000198566 127 ntBASIC0.61□□□□□ -2.31
VhlP40338 AC166358.7-201ENSMUST00000221132 108 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms