Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm19855-201ENSMUST00000210145 249 ntBASIC1.66□□□□□ -2.14
Traf1P39428 Gm22294-201ENSMUST00000083308 104 ntBASIC1.66□□□□□ -2.14
Traf1P39428 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Traf1P39428 Gm24116-201ENSMUST00000103975 107 ntBASIC1.65□□□□□ -2.15
Traf1P39428 Gm11834-201ENSMUST00000122257 585 ntBASIC1.65□□□□□ -2.15
Traf1P39428 Gm22559-201ENSMUST00000157329 134 ntBASIC1.65□□□□□ -2.15
Traf1P39428 Gm23967-201ENSMUST00000175062 78 ntBASIC1.65□□□□□ -2.15
Traf1P39428 Gm26914-201ENSMUST00000182262 223 ntBASIC1.65□□□□□ -2.15
Traf1P39428 Gm36946-201ENSMUST00000192706 435 ntBASIC1.65□□□□□ -2.15
Traf1P39428 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.65□□□□□ -2.15
Traf1P39428 Gm44962-201ENSMUST00000206460 279 ntBASIC1.65□□□□□ -2.15
Traf1P39428 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC1.65□□□□□ -2.15
Traf1P39428 Gm46993-201ENSMUST00000220708 259 ntBASIC1.65□□□□□ -2.15
Traf1P39428 Gm25078-201ENSMUST00000082530 107 ntBASIC1.65□□□□□ -2.15
Traf1P39428 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Traf1P39428 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.64□□□□□ -2.15
Traf1P39428 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Traf1P39428 Gm11572-201ENSMUST00000119164 120 ntBASIC1.64□□□□□ -2.15
Traf1P39428 Gm24630-201ENSMUST00000122768 106 ntBASIC1.64□□□□□ -2.15
Traf1P39428 Gm23221-201ENSMUST00000158118 93 ntBASIC1.64□□□□□ -2.15
Traf1P39428 Gm27326-201ENSMUST00000183504 95 ntBASIC1.64□□□□□ -2.15
Traf1P39428 Gm27711-201ENSMUST00000183802 118 ntBASIC1.64□□□□□ -2.15
Traf1P39428 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC1.64□□□□□ -2.15
Traf1P39428 Gm22021-201ENSMUST00000104353 107 ntBASIC1.63□□□□□ -2.15
Traf1P39428 Gm14761-201ENSMUST00000121363 262 ntBASIC1.63□□□□□ -2.15
Traf1P39428 Gm14298-201ENSMUST00000139032 237 ntBASIC1.63□□□□□ -2.15
Traf1P39428 Gm16356-201ENSMUST00000143300 169 ntBASIC1.63□□□□□ -2.15
Traf1P39428 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.63□□□□□ -2.15
Traf1P39428 Gm22537-201ENSMUST00000158172 199 ntBASIC1.63□□□□□ -2.15
Traf1P39428 Gm26004-201ENSMUST00000158804 116 ntBASIC1.63□□□□□ -2.15
Traf1P39428 Gm23474-201ENSMUST00000158884 75 ntBASIC1.63□□□□□ -2.15
Traf1P39428 Gm25284-201ENSMUST00000180345 141 ntBASIC1.63□□□□□ -2.15
Traf1P39428 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC1.63□□□□□ -2.15
Traf1P39428 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.63□□□□□ -2.15
Traf1P39428 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC1.63□□□□□ -2.15
Traf1P39428 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC1.63□□□□□ -2.15
Traf1P39428 Gm24164-201ENSMUST00000093663 104 ntBASIC1.63□□□□□ -2.15
Traf1P39428 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.63□□□□□ -2.15
Traf1P39428 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.63□□□□□ -2.15
Traf1P39428 Gm23836-201ENSMUST00000104434 129 ntBASIC1.62□□□□□ -2.15
Traf1P39428 Gm12647-201ENSMUST00000118977 265 ntBASIC1.62□□□□□ -2.15
Traf1P39428 Gm22215-201ENSMUST00000157558 96 ntBASIC1.62□□□□□ -2.15
Traf1P39428 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
Traf1P39428 Mir6905-201ENSMUST00000184228 70 ntBASIC1.62□□□□□ -2.15
Traf1P39428 Gm28409-201ENSMUST00000187064 103 ntBASIC1.62□□□□□ -2.15
Traf1P39428 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC1.62□□□□□ -2.15
Traf1P39428 AL590614.1-201ENSMUST00000226037 268 ntBASIC1.62□□□□□ -2.15
Traf1P39428 Gm24038-201ENSMUST00000082872 159 ntBASIC1.62□□□□□ -2.15
Traf1P39428 Gm23412-201ENSMUST00000083017 107 ntBASIC1.62□□□□□ -2.15
Traf1P39428 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.62□□□□□ -2.15
Traf1P39428 Gm13967-201ENSMUST00000120404 380 ntBASIC1.61□□□□□ -2.15
Traf1P39428 Gm23262-201ENSMUST00000158323 168 ntBASIC1.61□□□□□ -2.15
Traf1P39428 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC1.61□□□□□ -2.15
Traf1P39428 Gm17113-201ENSMUST00000170118 171 ntBASIC1.61□□□□□ -2.15
Traf1P39428 Gm7958-201ENSMUST00000178255 468 ntBASIC1.61□□□□□ -2.15
Traf1P39428 Gm7950-201ENSMUST00000179633 468 ntBASIC1.61□□□□□ -2.15
Traf1P39428 Mir669a-7-201ENSMUST00000180364 87 ntBASIC1.61□□□□□ -2.15
Traf1P39428 Mir669a-6-201ENSMUST00000196127 87 ntBASIC1.61□□□□□ -2.15
Traf1P39428 Mir669a-12-201ENSMUST00000197274 87 ntBASIC1.61□□□□□ -2.15
Traf1P39428 Mir669a-5-201ENSMUST00000197439 87 ntBASIC1.61□□□□□ -2.15
Traf1P39428 Mir669a-10-201ENSMUST00000197745 87 ntBASIC1.61□□□□□ -2.15
Traf1P39428 Mir669a-11-201ENSMUST00000197952 87 ntBASIC1.61□□□□□ -2.15
Traf1P39428 Mir669a-4-201ENSMUST00000198665 87 ntBASIC1.61□□□□□ -2.15
Traf1P39428 Mir669a-9-201ENSMUST00000200087 87 ntBASIC1.61□□□□□ -2.15
Traf1P39428 Mir669a-8-201ENSMUST00000200268 87 ntBASIC1.61□□□□□ -2.15
Traf1P39428 Gm43911-201ENSMUST00000203097 76 ntBASIC1.61□□□□□ -2.15
Traf1P39428 Gm44419-201ENSMUST00000203338 229 ntBASIC1.61□□□□□ -2.15
Traf1P39428 Gm45116-201ENSMUST00000207392 275 ntBASIC1.61□□□□□ -2.15
Traf1P39428 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC1.61□□□□□ -2.15
Traf1P39428 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Traf1P39428 Gm24895-201ENSMUST00000122742 74 ntBASIC1.6□□□□□ -2.15
Traf1P39428 Gm22080-201ENSMUST00000157591 106 ntBASIC1.6□□□□□ -2.15
Traf1P39428 Gm22963-201ENSMUST00000157960 91 ntBASIC1.6□□□□□ -2.15
Traf1P39428 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC1.6□□□□□ -2.15
Traf1P39428 Gm22114-201ENSMUST00000177756 107 ntBASIC1.6□□□□□ -2.15
Traf1P39428 Gm27845-201ENSMUST00000184479 114 ntBASIC1.6□□□□□ -2.15
Traf1P39428 Gm44063-201ENSMUST00000203307 376 ntBASIC1.6□□□□□ -2.15
Traf1P39428 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC1.6□□□□□ -2.15
Traf1P39428 Gm24966-201ENSMUST00000082443 79 ntBASIC1.6□□□□□ -2.15
Traf1P39428 Gm25513-201ENSMUST00000083861 162 ntBASIC1.6□□□□□ -2.15
Traf1P39428 Gm22032-201ENSMUST00000116946 116 ntBASIC1.59□□□□□ -2.15
Traf1P39428 Gm14922-201ENSMUST00000121131 163 ntBASIC1.59□□□□□ -2.15
Traf1P39428 Gm26255-201ENSMUST00000122492 103 ntBASIC1.59□□□□□ -2.15
Traf1P39428 Gm27493-201ENSMUST00000184128 78 ntBASIC1.59□□□□□ -2.15
Traf1P39428 Gm37313-201ENSMUST00000191673 290 ntBASIC1.59□□□□□ -2.15
Traf1P39428 Mir6962-201ENSMUST00000199512 63 ntBASIC1.59□□□□□ -2.15
Traf1P39428 Gm23055-201ENSMUST00000082805 94 ntBASIC1.59□□□□□ -2.15
Traf1P39428 Mir410-201ENSMUST00000083563 81 ntBASIC1.59□□□□□ -2.15
Traf1P39428 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.59□□□□□ -2.16
Traf1P39428 Gm26159-201ENSMUST00000158968 104 ntBASIC1.58□□□□□ -2.16
Traf1P39428 Mir7675-201ENSMUST00000184262 58 ntBASIC1.58□□□□□ -2.16
Traf1P39428 Mir7665-201ENSMUST00000184907 63 ntBASIC1.58□□□□□ -2.16
Traf1P39428 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Traf1P39428 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC1.58□□□□□ -2.16
Traf1P39428 AC163646.2-201ENSMUST00000227962 141 ntBASIC1.58□□□□□ -2.16
Traf1P39428 Gm25038-201ENSMUST00000082928 130 ntBASIC1.58□□□□□ -2.16
Traf1P39428 Gm24261-201ENSMUST00000083744 104 ntBASIC1.58□□□□□ -2.16
Traf1P39428 Gm26107-201ENSMUST00000083972 107 ntBASIC1.58□□□□□ -2.16
Traf1P39428 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.57□□□□□ -2.16
Traf1P39428 Mir544-201ENSMUST00000103813 78 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 119 ms