Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm24727-201ENSMUST00000158231 144 ntBASIC3.46□□□□□ -1.86
Msx1P13297 Gm25769-201ENSMUST00000158569 127 ntBASIC3.46□□□□□ -1.86
Msx1P13297 Gm20693-201ENSMUST00000177431 211 ntBASIC3.46□□□□□ -1.86
Msx1P13297 Gm10161-201ENSMUST00000091506 204 ntBASIC3.46□□□□□ -1.86
Msx1P13297 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.46□□□□□ -1.86
Msx1P13297 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
Msx1P13297 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.45□□□□□ -1.86
Msx1P13297 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Msx1P13297 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Msx1P13297 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Msx1P13297 Gm22772-201ENSMUST00000104451 121 ntBASIC3.45□□□□□ -1.86
Msx1P13297 Gm24946-201ENSMUST00000158332 106 ntBASIC3.45□□□□□ -1.86
Msx1P13297 Gm24947-201ENSMUST00000158334 110 ntBASIC3.45□□□□□ -1.86
Msx1P13297 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC3.45□□□□□ -1.86
Msx1P13297 Gm28669-201ENSMUST00000188400 100 ntBASIC3.45□□□□□ -1.86
Msx1P13297 Gm36776-201ENSMUST00000207006 203 ntBASIC3.45□□□□□ -1.86
Msx1P13297 Gm44887-201ENSMUST00000208980 178 ntBASIC3.45□□□□□ -1.86
Msx1P13297 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.45□□□□□ -1.86
Msx1P13297 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.45□□□□□ -1.86
Msx1P13297 Gm25205-201ENSMUST00000082841 103 ntBASIC3.45□□□□□ -1.86
Msx1P13297 Mir101b-201ENSMUST00000083622 97 ntBASIC3.45□□□□□ -1.86
Msx1P13297 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
Msx1P13297 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Msx1P13297 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
Msx1P13297 Gm23609-201ENSMUST00000104542 127 ntBASIC3.44□□□□□ -1.86
Msx1P13297 Gm23532-201ENSMUST00000104569 112 ntBASIC3.44□□□□□ -1.86
Msx1P13297 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC3.44□□□□□ -1.86
Msx1P13297 Gm13862-201ENSMUST00000121220 197 ntBASIC3.44□□□□□ -1.86
Msx1P13297 Gm22890-201ENSMUST00000158642 144 ntBASIC3.44□□□□□ -1.86
Msx1P13297 Gm24816-201ENSMUST00000175311 151 ntBASIC3.44□□□□□ -1.86
Msx1P13297 Mir6914-201ENSMUST00000184999 69 ntBASIC3.44□□□□□ -1.86
Msx1P13297 Gm9712-201ENSMUST00000210842 311 ntBASIC3.44□□□□□ -1.86
Msx1P13297 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Msx1P13297 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Msx1P13297 Gm37331-201ENSMUST00000192367 3375 ntBASIC3.43□□□□□ -1.86
Msx1P13297 Gm25112-201ENSMUST00000122680 104 ntBASIC3.43□□□□□ -1.86
Msx1P13297 Gm23602-201ENSMUST00000157258 132 ntBASIC3.43□□□□□ -1.86
Msx1P13297 Gm24138-201ENSMUST00000157572 114 ntBASIC3.43□□□□□ -1.86
Msx1P13297 Gm24811-201ENSMUST00000175313 100 ntBASIC3.43□□□□□ -1.86
Msx1P13297 Gm27446-201ENSMUST00000183963 89 ntBASIC3.43□□□□□ -1.86
Msx1P13297 Mir7081-201ENSMUST00000184490 75 ntBASIC3.43□□□□□ -1.86
Msx1P13297 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC3.43□□□□□ -1.86
Msx1P13297 Gm37081-201ENSMUST00000192034 196 ntBASIC3.43□□□□□ -1.86
Msx1P13297 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC3.43□□□□□ -1.86
Msx1P13297 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.43□□□□□ -1.86
Msx1P13297 Gm26326-201ENSMUST00000083070 129 ntBASIC3.43□□□□□ -1.86
Msx1P13297 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Msx1P13297 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Msx1P13297 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
Msx1P13297 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Msx1P13297 Gm44525-201ENSMUST00000183129 2634 ntBASIC3.42□□□□□ -1.86
Msx1P13297 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Msx1P13297 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Msx1P13297 Gm23349-201ENSMUST00000158432 98 ntBASIC3.42□□□□□ -1.86
Msx1P13297 Gm26460-201ENSMUST00000175061 126 ntBASIC3.42□□□□□ -1.86
Msx1P13297 AC098718.1-201ENSMUST00000226166 175 ntBASIC3.42□□□□□ -1.86
Msx1P13297 Gm25124-201ENSMUST00000083345 164 ntBASIC3.42□□□□□ -1.86
Msx1P13297 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
Msx1P13297 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Msx1P13297 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Msx1P13297 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Msx1P13297 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.41□□□□□ -1.86
Msx1P13297 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.41□□□□□ -1.86
Msx1P13297 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Msx1P13297 Gm23256-201ENSMUST00000102235 110 ntBASIC3.41□□□□□ -1.86
Msx1P13297 Gm26140-201ENSMUST00000103807 110 ntBASIC3.41□□□□□ -1.86
Msx1P13297 Gm23747-201ENSMUST00000104228 131 ntBASIC3.41□□□□□ -1.86
Msx1P13297 Gm24280-201ENSMUST00000104237 134 ntBASIC3.41□□□□□ -1.86
Msx1P13297 Gm22023-201ENSMUST00000104354 130 ntBASIC3.41□□□□□ -1.86
Msx1P13297 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Msx1P13297 Gm24244-201ENSMUST00000157317 130 ntBASIC3.41□□□□□ -1.86
Msx1P13297 Gm25887-201ENSMUST00000157777 84 ntBASIC3.41□□□□□ -1.86
Msx1P13297 Gm22770-201ENSMUST00000158368 67 ntBASIC3.41□□□□□ -1.86
Msx1P13297 Gm26141-201ENSMUST00000175299 126 ntBASIC3.41□□□□□ -1.86
Msx1P13297 Gm22908-201ENSMUST00000177620 110 ntBASIC3.41□□□□□ -1.86
Msx1P13297 Gm28010-201ENSMUST00000179485 126 ntBASIC3.41□□□□□ -1.86
Msx1P13297 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Msx1P13297 Gm5829-201ENSMUST00000191383 351 ntBASIC3.41□□□□□ -1.86
Msx1P13297 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC3.41□□□□□ -1.86
Msx1P13297 Gm9370-201ENSMUST00000222787 609 ntBASIC3.41□□□□□ -1.86
Msx1P13297 Hmgb1l-201ENSMUST00000082150 571 ntBASIC3.41□□□□□ -1.86
Msx1P13297 Gm24533-201ENSMUST00000083138 196 ntBASIC3.41□□□□□ -1.86
Msx1P13297 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Msx1P13297 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.4□□□□□ -1.86
Msx1P13297 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
Msx1P13297 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.4□□□□□ -1.86
Msx1P13297 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Msx1P13297 Gm25382-201ENSMUST00000157811 97 ntBASIC3.4□□□□□ -1.87
Msx1P13297 Mir7014-201ENSMUST00000183853 63 ntBASIC3.4□□□□□ -1.87
Msx1P13297 Mir6917-201ENSMUST00000184111 61 ntBASIC3.4□□□□□ -1.87
Msx1P13297 Gm9156-201ENSMUST00000189660 463 ntBASIC3.4□□□□□ -1.87
Msx1P13297 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.4□□□□□ -1.87
Msx1P13297 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.4□□□□□ -1.87
Msx1P13297 Gm9765-201ENSMUST00000043170 321 ntBASIC3.4□□□□□ -1.87
Msx1P13297 Gm22245-201ENSMUST00000082479 103 ntBASIC3.4□□□□□ -1.87
Msx1P13297 Mir124a-3-201ENSMUST00000083520 68 ntBASIC3.4□□□□□ -1.87
Msx1P13297 Gm10212-201ENSMUST00000087884 324 ntBASIC3.4□□□□□ -1.87
Msx1P13297 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
Msx1P13297 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Msx1P13297 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms