Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm24528-201ENSMUST00000179164 79 ntBASIC3.27□□□□□ -1.89
RaraP11416 Gm22909-201ENSMUST00000179190 79 ntBASIC3.27□□□□□ -1.89
RaraP11416 Gm26334-201ENSMUST00000179403 79 ntBASIC3.27□□□□□ -1.89
RaraP11416 Gm25463-201ENSMUST00000179405 79 ntBASIC3.27□□□□□ -1.89
RaraP11416 Gm25742-201ENSMUST00000179530 79 ntBASIC3.27□□□□□ -1.89
RaraP11416 Gm25209-201ENSMUST00000179576 79 ntBASIC3.27□□□□□ -1.89
RaraP11416 Gm26392-201ENSMUST00000179661 79 ntBASIC3.27□□□□□ -1.89
RaraP11416 Gm25230-201ENSMUST00000179740 79 ntBASIC3.27□□□□□ -1.89
RaraP11416 Gm26434-201ENSMUST00000179778 79 ntBASIC3.27□□□□□ -1.89
RaraP11416 Gm25741-201ENSMUST00000179825 79 ntBASIC3.27□□□□□ -1.89
RaraP11416 Gm24759-201ENSMUST00000179827 79 ntBASIC3.27□□□□□ -1.89
RaraP11416 Gm24219-201ENSMUST00000179861 79 ntBASIC3.27□□□□□ -1.89
RaraP11416 Mir7039-201ENSMUST00000183852 85 ntBASIC3.27□□□□□ -1.89
RaraP11416 Mir8116-201ENSMUST00000184134 97 ntBASIC3.27□□□□□ -1.89
RaraP11416 Gm44476-201ENSMUST00000196225 91 ntBASIC3.27□□□□□ -1.89
RaraP11416 Gm44358-201ENSMUST00000196301 98 ntBASIC3.27□□□□□ -1.89
RaraP11416 AC115735.1-201ENSMUST00000226633 350 ntBASIC3.27□□□□□ -1.89
RaraP11416 Mir128-1-201ENSMUST00000083586 70 ntBASIC3.27□□□□□ -1.89
RaraP11416 Gm23254-201ENSMUST00000097244 79 ntBASIC3.27□□□□□ -1.89
RaraP11416 Gm25753-201ENSMUST00000116792 121 ntBASIC3.26□□□□□ -1.89
RaraP11416 Gm13885-201ENSMUST00000117569 187 ntBASIC3.26□□□□□ -1.89
RaraP11416 Gm12213-201ENSMUST00000119924 353 ntBASIC3.26□□□□□ -1.89
RaraP11416 Gm12276-201ENSMUST00000121709 301 ntBASIC3.26□□□□□ -1.89
RaraP11416 Gm24894-201ENSMUST00000122744 118 ntBASIC3.26□□□□□ -1.89
RaraP11416 Gm25828-201ENSMUST00000157087 95 ntBASIC3.26□□□□□ -1.89
RaraP11416 Gm23667-201ENSMUST00000157466 120 ntBASIC3.26□□□□□ -1.89
RaraP11416 Gm43264-201ENSMUST00000202284 325 ntBASIC3.26□□□□□ -1.89
RaraP11416 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC3.26□□□□□ -1.89
RaraP11416 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.26□□□□□ -1.89
RaraP11416 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
RaraP11416 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
RaraP11416 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
RaraP11416 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
RaraP11416 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.25□□□□□ -1.89
RaraP11416 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.25□□□□□ -1.89
RaraP11416 Gm23599-201ENSMUST00000157261 251 ntBASIC3.25□□□□□ -1.89
RaraP11416 Gm26088-201ENSMUST00000157896 131 ntBASIC3.25□□□□□ -1.89
RaraP11416 Gm20438-201ENSMUST00000174441 329 ntBASIC3.25□□□□□ -1.89
RaraP11416 AC122465.2-201ENSMUST00000221774 354 ntBASIC3.25□□□□□ -1.89
RaraP11416 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
RaraP11416 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RaraP11416 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.25□□□□□ -1.89
RaraP11416 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
RaraP11416 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
RaraP11416 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC3.24□□□□□ -1.89
RaraP11416 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
RaraP11416 Gm23015-201ENSMUST00000104145 128 ntBASIC3.24□□□□□ -1.89
RaraP11416 Gm23858-201ENSMUST00000158384 106 ntBASIC3.24□□□□□ -1.89
RaraP11416 Gm24842-201ENSMUST00000158681 54 ntBASIC3.24□□□□□ -1.89
RaraP11416 Gm22853-201ENSMUST00000174974 131 ntBASIC3.24□□□□□ -1.89
RaraP11416 Gm27783-201ENSMUST00000183534 105 ntBASIC3.24□□□□□ -1.89
RaraP11416 Gm27582-201ENSMUST00000184084 126 ntBASIC3.24□□□□□ -1.89
RaraP11416 Gm37377-201ENSMUST00000191733 304 ntBASIC3.24□□□□□ -1.89
RaraP11416 Gm37085-201ENSMUST00000193780 196 ntBASIC3.24□□□□□ -1.89
RaraP11416 AC147101.2-201ENSMUST00000219756 184 ntBASIC3.24□□□□□ -1.89
RaraP11416 Gm23246-201ENSMUST00000083371 67 ntBASIC3.24□□□□□ -1.89
RaraP11416 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
RaraP11416 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.24□□□□□ -1.89
RaraP11416 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RaraP11416 Mir499-201ENSMUST00000102357 79 ntBASIC3.23□□□□□ -1.89
RaraP11416 Gm24118-201ENSMUST00000103972 126 ntBASIC3.23□□□□□ -1.89
RaraP11416 Gm24126-201ENSMUST00000104111 106 ntBASIC3.23□□□□□ -1.89
RaraP11416 Gm23609-201ENSMUST00000104542 127 ntBASIC3.23□□□□□ -1.89
RaraP11416 Gm13862-201ENSMUST00000121220 197 ntBASIC3.23□□□□□ -1.89
RaraP11416 Gm22558-201ENSMUST00000157326 95 ntBASIC3.23□□□□□ -1.89
RaraP11416 Gm22221-201ENSMUST00000157362 103 ntBASIC3.23□□□□□ -1.89
RaraP11416 Gm23381-201ENSMUST00000157676 94 ntBASIC3.23□□□□□ -1.89
RaraP11416 Gm22708-201ENSMUST00000158987 103 ntBASIC3.23□□□□□ -1.89
RaraP11416 Mir669j-201ENSMUST00000179023 121 ntBASIC3.23□□□□□ -1.89
RaraP11416 Gm44482-201ENSMUST00000199232 103 ntBASIC3.23□□□□□ -1.89
RaraP11416 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.23□□□□□ -1.89
RaraP11416 Gm23297-201ENSMUST00000083184 127 ntBASIC3.23□□□□□ -1.89
RaraP11416 Gm24615-201ENSMUST00000083268 113 ntBASIC3.23□□□□□ -1.89
RaraP11416 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
RaraP11416 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
RaraP11416 n-R5s158-201ENSMUST00000104095 118 ntBASIC3.22□□□□□ -1.89
RaraP11416 Gm14567-201ENSMUST00000117155 174 ntBASIC3.22□□□□□ -1.89
RaraP11416 Gm23043-201ENSMUST00000157890 109 ntBASIC3.22□□□□□ -1.89
RaraP11416 Gm24358-201ENSMUST00000158424 288 ntBASIC3.22□□□□□ -1.89
RaraP11416 Mir3103-201ENSMUST00000175474 67 ntBASIC3.22□□□□□ -1.89
RaraP11416 Gm20672-201ENSMUST00000176605 261 ntBASIC3.22□□□□□ -1.89
RaraP11416 Gm24390-201ENSMUST00000179578 62 ntBASIC3.22□□□□□ -1.89
RaraP11416 Gm44921-201ENSMUST00000205290 301 ntBASIC3.22□□□□□ -1.89
RaraP11416 Gm36776-201ENSMUST00000207006 203 ntBASIC3.22□□□□□ -1.89
RaraP11416 AC150314.1-201ENSMUST00000214798 238 ntBASIC3.22□□□□□ -1.89
RaraP11416 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.22□□□□□ -1.89
RaraP11416 Gm25130-201ENSMUST00000082650 156 ntBASIC3.22□□□□□ -1.89
RaraP11416 Mir19b-2-201ENSMUST00000083539 84 ntBASIC3.22□□□□□ -1.89
RaraP11416 Mir369-201ENSMUST00000083627 79 ntBASIC3.22□□□□□ -1.89
RaraP11416 Gm25513-201ENSMUST00000083861 162 ntBASIC3.22□□□□□ -1.89
RaraP11416 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
RaraP11416 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
RaraP11416 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RaraP11416 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
RaraP11416 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.21□□□□□ -1.9
RaraP11416 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
RaraP11416 Mir374b-201ENSMUST00000102314 95 ntBASIC3.21□□□□□ -1.9
RaraP11416 Gm25825-201ENSMUST00000157091 124 ntBASIC3.21□□□□□ -1.9
RaraP11416 Gm24650-201ENSMUST00000157105 103 ntBASIC3.21□□□□□ -1.9
RaraP11416 Gm24138-201ENSMUST00000157572 114 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 270.9 ms