Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm27640-201ENSMUST00000184580 147 ntBASIC1.17□□□□□ -2.22
Lire1P11260 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC1.17□□□□□ -2.22
Lire1P11260 AC126554.1-201ENSMUST00000222161 271 ntBASIC1.17□□□□□ -2.22
Lire1P11260 Gm25579-201ENSMUST00000083407 106 ntBASIC1.17□□□□□ -2.22
Lire1P11260 Mir200b-201ENSMUST00000083615 70 ntBASIC1.17□□□□□ -2.22
Lire1P11260 Gm23636-201ENSMUST00000175070 95 ntBASIC1.16□□□□□ -2.22
Lire1P11260 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
Lire1P11260 Mir7052-201ENSMUST00000184821 65 ntBASIC1.16□□□□□ -2.22
Lire1P11260 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Lire1P11260 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.16□□□□□ -2.22
Lire1P11260 Gm24163-201ENSMUST00000093660 132 ntBASIC1.16□□□□□ -2.22
Lire1P11260 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC1.15□□□□□ -2.23
Lire1P11260 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC1.15□□□□□ -2.23
Lire1P11260 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC1.15□□□□□ -2.23
Lire1P11260 Gm2962-201ENSMUST00000159266 336 ntBASIC1.15□□□□□ -2.23
Lire1P11260 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
Lire1P11260 Gm27656-201ENSMUST00000185055 80 ntBASIC1.15□□□□□ -2.23
Lire1P11260 Gm29022-201ENSMUST00000190702 225 ntBASIC1.15□□□□□ -2.23
Lire1P11260 Gm44960-201ENSMUST00000207403 141 ntBASIC1.15□□□□□ -2.23
Lire1P11260 CT485612.2-201ENSMUST00000223014 151 ntBASIC1.15□□□□□ -2.23
Lire1P11260 Gm11351-202ENSMUST00000225724 478 ntBASIC1.15□□□□□ -2.23
Lire1P11260 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.15□□□□□ -2.23
Lire1P11260 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.15□□□□□ -2.23
Lire1P11260 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.15□□□□□ -2.23
Lire1P11260 Gm24355-201ENSMUST00000082858 122 ntBASIC1.15□□□□□ -2.23
Lire1P11260 Gm25650-201ENSMUST00000083784 162 ntBASIC1.15□□□□□ -2.23
Lire1P11260 Gm25513-201ENSMUST00000083861 162 ntBASIC1.15□□□□□ -2.23
Lire1P11260 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
Lire1P11260 Gm22485-201ENSMUST00000157990 109 ntBASIC1.14□□□□□ -2.23
Lire1P11260 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC1.14□□□□□ -2.23
Lire1P11260 Gm25069-201ENSMUST00000175238 86 ntBASIC1.14□□□□□ -2.23
Lire1P11260 Gm23660-201ENSMUST00000178362 79 ntBASIC1.14□□□□□ -2.23
Lire1P11260 Gm24088-201ENSMUST00000179100 79 ntBASIC1.14□□□□□ -2.23
Lire1P11260 Mir6394-201ENSMUST00000184738 99 ntBASIC1.14□□□□□ -2.23
Lire1P11260 Gm37801-201ENSMUST00000194754 274 ntBASIC1.14□□□□□ -2.23
Lire1P11260 Gm43220-201ENSMUST00000199299 282 ntBASIC1.14□□□□□ -2.23
Lire1P11260 AC166358.10-201ENSMUST00000220556 144 ntBASIC1.14□□□□□ -2.23
Lire1P11260 Gm9795-201ENSMUST00000062156 693 ntBASIC1.14□□□□□ -2.23
Lire1P11260 Mir155-201ENSMUST00000083463 65 ntBASIC1.14□□□□□ -2.23
Lire1P11260 Gm26339-201ENSMUST00000102368 99 ntBASIC1.13□□□□□ -2.23
Lire1P11260 Gm24342-201ENSMUST00000103907 104 ntBASIC1.13□□□□□ -2.23
Lire1P11260 Mir465b-1-201ENSMUST00000103940 79 ntBASIC1.13□□□□□ -2.23
Lire1P11260 Gm24431-201ENSMUST00000104073 66 ntBASIC1.13□□□□□ -2.23
Lire1P11260 Mir465b-2-201ENSMUST00000104662 79 ntBASIC1.13□□□□□ -2.23
Lire1P11260 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.13□□□□□ -2.23
Lire1P11260 AC154636.2-201ENSMUST00000222538 161 ntBASIC1.13□□□□□ -2.23
Lire1P11260 AC160115.1-201ENSMUST00000224678 1574 ntBASIC1.13□□□□□ -2.23
Lire1P11260 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.12□□□□□ -2.23
Lire1P11260 Gm22515-201ENSMUST00000158273 305 ntBASIC1.12□□□□□ -2.23
Lire1P11260 Gm25166-201ENSMUST00000158909 111 ntBASIC1.12□□□□□ -2.23
Lire1P11260 Gm22802-201ENSMUST00000175621 89 ntBASIC1.12□□□□□ -2.23
Lire1P11260 Gm28344-201ENSMUST00000185704 279 ntBASIC1.12□□□□□ -2.23
Lire1P11260 Gm28862-201ENSMUST00000188246 163 ntBASIC1.12□□□□□ -2.23
Lire1P11260 Gm18291-201ENSMUST00000190791 301 ntBASIC1.12□□□□□ -2.23
Lire1P11260 Gm44387-201ENSMUST00000196298 145 ntBASIC1.12□□□□□ -2.23
Lire1P11260 AL935138.1-201ENSMUST00000215309 196 ntBASIC1.12□□□□□ -2.23
Lire1P11260 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
Lire1P11260 Mir448-201ENSMUST00000083516 112 ntBASIC1.12□□□□□ -2.23
Lire1P11260 Gm10730-201ENSMUST00000194097 2723 ntBASIC1.11□□□□□ -2.23
Lire1P11260 Gm23705-201ENSMUST00000104370 130 ntBASIC1.11□□□□□ -2.23
Lire1P11260 Gm12770-201ENSMUST00000121734 462 ntBASIC1.11□□□□□ -2.23
Lire1P11260 Gm24630-201ENSMUST00000122768 106 ntBASIC1.11□□□□□ -2.23
Lire1P11260 Gm23114-201ENSMUST00000158478 117 ntBASIC1.11□□□□□ -2.23
Lire1P11260 Gm25768-201ENSMUST00000158570 98 ntBASIC1.11□□□□□ -2.23
Lire1P11260 Gm23340-201ENSMUST00000158955 123 ntBASIC1.11□□□□□ -2.23
Lire1P11260 Gm43602-201ENSMUST00000196772 300 ntBASIC1.11□□□□□ -2.23
Lire1P11260 Gm44301-201ENSMUST00000200362 143 ntBASIC1.11□□□□□ -2.23
Lire1P11260 CT954323.1-201ENSMUST00000222774 229 ntBASIC1.11□□□□□ -2.23
Lire1P11260 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.11□□□□□ -2.23
Lire1P11260 Mir196b-201ENSMUST00000083509 85 ntBASIC1.11□□□□□ -2.23
Lire1P11260 Gm24523-201ENSMUST00000083965 132 ntBASIC1.11□□□□□ -2.23
Lire1P11260 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
Lire1P11260 Snord71-201ENSMUST00000104361 85 ntBASIC1.1□□□□□ -2.23
Lire1P11260 Gm12433-201ENSMUST00000119659 255 ntBASIC1.1□□□□□ -2.23
Lire1P11260 Gm25909-201ENSMUST00000157619 121 ntBASIC1.1□□□□□ -2.23
Lire1P11260 Gm24853-201ENSMUST00000158026 121 ntBASIC1.1□□□□□ -2.23
Lire1P11260 Gm23059-201ENSMUST00000158978 107 ntBASIC1.1□□□□□ -2.23
Lire1P11260 Gm24818-201ENSMUST00000175093 161 ntBASIC1.1□□□□□ -2.23
Lire1P11260 Gm27539-201ENSMUST00000184971 224 ntBASIC1.1□□□□□ -2.23
Lire1P11260 Gm45268-201ENSMUST00000210046 370 ntBASIC1.1□□□□□ -2.23
Lire1P11260 AC166358.7-201ENSMUST00000221132 108 ntBASIC1.1□□□□□ -2.23
Lire1P11260 AC125543.5-201ENSMUST00000222799 108 ntBASIC1.1□□□□□ -2.23
Lire1P11260 Gm22685-201ENSMUST00000082848 106 ntBASIC1.1□□□□□ -2.23
Lire1P11260 Gm25683-201ENSMUST00000083940 131 ntBASIC1.1□□□□□ -2.23
Lire1P11260 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
Lire1P11260 Gm11859-201ENSMUST00000118099 455 ntBASIC1.09□□□□□ -2.23
Lire1P11260 Gm11792-201ENSMUST00000120640 168 ntBASIC1.09□□□□□ -2.23
Lire1P11260 Gm26968-201ENSMUST00000182894 481 ntBASIC1.09□□□□□ -2.23
Lire1P11260 Gm29014-201ENSMUST00000191422 326 ntBASIC1.09□□□□□ -2.23
Lire1P11260 Gm44490-201ENSMUST00000198566 127 ntBASIC1.09□□□□□ -2.23
Lire1P11260 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC1.09□□□□□ -2.23
Lire1P11260 Gm8125-201ENSMUST00000216602 738 ntBASIC1.09□□□□□ -2.23
Lire1P11260 AC102369.1-201ENSMUST00000218415 373 ntBASIC1.09□□□□□ -2.23
Lire1P11260 Gm24624-201ENSMUST00000082617 164 ntBASIC1.09□□□□□ -2.23
Lire1P11260 Mir32-201ENSMUST00000083610 70 ntBASIC1.09□□□□□ -2.23
Lire1P11260 Mir211-201ENSMUST00000083651 106 ntBASIC1.09□□□□□ -2.23
Lire1P11260 Rny1-201ENSMUST00000083767 112 ntBASIC1.09□□□□□ -2.23
Lire1P11260 Gm3867-201ENSMUST00000086108 279 ntBASIC1.09□□□□□ -2.23
Lire1P11260 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Lire1P11260 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC1.08□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms