Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm25814-201ENSMUST00000082754 107 ntBASIC2.25□□□□□ -2.05
Col3a1P08121 Gm23722-201ENSMUST00000083002 130 ntBASIC2.25□□□□□ -2.05
Col3a1P08121 Gm24616-201ENSMUST00000083274 139 ntBASIC2.25□□□□□ -2.05
Col3a1P08121 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Col3a1P08121 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
Col3a1P08121 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Col3a1P08121 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.24□□□□□ -2.05
Col3a1P08121 Mir301b-201ENSMUST00000102333 97 ntBASIC2.24□□□□□ -2.05
Col3a1P08121 Mir872-201ENSMUST00000104728 81 ntBASIC2.24□□□□□ -2.05
Col3a1P08121 Gm25805-201ENSMUST00000122788 108 ntBASIC2.24□□□□□ -2.05
Col3a1P08121 Gm24015-201ENSMUST00000157725 232 ntBASIC2.24□□□□□ -2.05
Col3a1P08121 Gm22554-201ENSMUST00000157798 147 ntBASIC2.24□□□□□ -2.05
Col3a1P08121 Gm23044-201ENSMUST00000157891 100 ntBASIC2.24□□□□□ -2.05
Col3a1P08121 Gm24304-201ENSMUST00000177635 107 ntBASIC2.24□□□□□ -2.05
Col3a1P08121 Gm7909-201ENSMUST00000182688 614 ntBASIC2.24□□□□□ -2.05
Col3a1P08121 Gm37361-201ENSMUST00000194345 132 ntBASIC2.24□□□□□ -2.05
Col3a1P08121 Gm37796-201ENSMUST00000195327 134 ntBASIC2.24□□□□□ -2.05
Col3a1P08121 AC147545.1-201ENSMUST00000227528 108 ntBASIC2.24□□□□□ -2.05
Col3a1P08121 Gm22247-201ENSMUST00000082476 131 ntBASIC2.24□□□□□ -2.05
Col3a1P08121 Gm25930-201ENSMUST00000082785 107 ntBASIC2.24□□□□□ -2.05
Col3a1P08121 Gm24356-201ENSMUST00000082859 106 ntBASIC2.24□□□□□ -2.05
Col3a1P08121 Gm24044-201ENSMUST00000083107 156 ntBASIC2.24□□□□□ -2.05
Col3a1P08121 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC2.24□□□□□ -2.05
Col3a1P08121 Gm37824-201ENSMUST00000193430 3236 ntBASIC2.23□□□□□ -2.05
Col3a1P08121 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
Col3a1P08121 Gm25090-201ENSMUST00000104000 132 ntBASIC2.23□□□□□ -2.05
Col3a1P08121 Gm14588-201ENSMUST00000119895 172 ntBASIC2.23□□□□□ -2.05
Col3a1P08121 Gm7209-201ENSMUST00000122339 333 ntBASIC2.23□□□□□ -2.05
Col3a1P08121 n-R5s216-201ENSMUST00000122755 112 ntBASIC2.23□□□□□ -2.05
Col3a1P08121 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC2.23□□□□□ -2.05
Col3a1P08121 Gm23586-201ENSMUST00000157657 123 ntBASIC2.23□□□□□ -2.05
Col3a1P08121 Gm25494-201ENSMUST00000158143 100 ntBASIC2.23□□□□□ -2.05
Col3a1P08121 Gm26200-201ENSMUST00000180273 79 ntBASIC2.23□□□□□ -2.05
Col3a1P08121 Gm44337-201ENSMUST00000196553 114 ntBASIC2.23□□□□□ -2.05
Col3a1P08121 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC2.23□□□□□ -2.05
Col3a1P08121 Gm43220-201ENSMUST00000199299 282 ntBASIC2.23□□□□□ -2.05
Col3a1P08121 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.23□□□□□ -2.05
Col3a1P08121 Gm10360-201ENSMUST00000097219 272 ntBASIC2.23□□□□□ -2.05
Col3a1P08121 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Col3a1P08121 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
Col3a1P08121 Gm42448-201ENSMUST00000197122 2644 ntBASIC2.23□□□□□ -2.05
Col3a1P08121 Gm24282-201ENSMUST00000104232 66 ntBASIC2.22□□□□□ -2.05
Col3a1P08121 Gm12304-201ENSMUST00000120312 385 ntBASIC2.22□□□□□ -2.05
Col3a1P08121 Gm16354-201ENSMUST00000155376 150 ntBASIC2.22□□□□□ -2.05
Col3a1P08121 Gm22561-201ENSMUST00000157331 84 ntBASIC2.22□□□□□ -2.05
Col3a1P08121 Gm22316-201ENSMUST00000158012 216 ntBASIC2.22□□□□□ -2.05
Col3a1P08121 Gm24726-201ENSMUST00000158232 121 ntBASIC2.22□□□□□ -2.05
Col3a1P08121 Gm26097-201ENSMUST00000179642 93 ntBASIC2.22□□□□□ -2.05
Col3a1P08121 Mir6383-201ENSMUST00000184545 116 ntBASIC2.22□□□□□ -2.05
Col3a1P08121 Gm6003-201ENSMUST00000187903 463 ntBASIC2.22□□□□□ -2.05
Col3a1P08121 Gm28848-201ENSMUST00000189984 168 ntBASIC2.22□□□□□ -2.05
Col3a1P08121 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC2.22□□□□□ -2.05
Col3a1P08121 Gm44563-201ENSMUST00000207958 178 ntBASIC2.22□□□□□ -2.05
Col3a1P08121 Gm24966-201ENSMUST00000082443 79 ntBASIC2.22□□□□□ -2.05
Col3a1P08121 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
Col3a1P08121 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Col3a1P08121 Gm14073-201ENSMUST00000117344 381 ntBASIC2.21□□□□□ -2.06
Col3a1P08121 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC2.21□□□□□ -2.06
Col3a1P08121 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC2.21□□□□□ -2.06
Col3a1P08121 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC2.21□□□□□ -2.06
Col3a1P08121 AC122242.1-201ENSMUST00000224650 304 ntBASIC2.21□□□□□ -2.06
Col3a1P08121 Gm24948-201ENSMUST00000082866 207 ntBASIC2.21□□□□□ -2.06
Col3a1P08121 Gm25987-201ENSMUST00000083234 107 ntBASIC2.21□□□□□ -2.06
Col3a1P08121 Gm26166-201ENSMUST00000083788 107 ntBASIC2.21□□□□□ -2.06
Col3a1P08121 Gm23850-201ENSMUST00000083830 169 ntBASIC2.21□□□□□ -2.06
Col3a1P08121 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
Col3a1P08121 Gm21940-201ENSMUST00000204940 2278 ntBASIC2.21□□□□□ -2.06
Col3a1P08121 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC2.21□□□□□ -2.06
Col3a1P08121 Mir466b-3-201ENSMUST00000103806 81 ntBASIC2.2□□□□□ -2.06
Col3a1P08121 Mdga2-203ENSMUST00000113942 423 ntBASIC2.2□□□□□ -2.06
Col3a1P08121 Mir1942-201ENSMUST00000157274 63 ntBASIC2.2□□□□□ -2.06
Col3a1P08121 Gm22215-201ENSMUST00000157558 96 ntBASIC2.2□□□□□ -2.06
Col3a1P08121 Gm22521-201ENSMUST00000158272 134 ntBASIC2.2□□□□□ -2.06
Col3a1P08121 Mir1966-201ENSMUST00000158807 108 ntBASIC2.2□□□□□ -2.06
Col3a1P08121 Gm22699-201ENSMUST00000175376 105 ntBASIC2.2□□□□□ -2.06
Col3a1P08121 Gm23714-201ENSMUST00000179259 105 ntBASIC2.2□□□□□ -2.06
Col3a1P08121 Gm37923-201ENSMUST00000191624 161 ntBASIC2.2□□□□□ -2.06
Col3a1P08121 Gm37778-201ENSMUST00000191732 190 ntBASIC2.2□□□□□ -2.06
Col3a1P08121 Gm42774-201ENSMUST00000198854 283 ntBASIC2.2□□□□□ -2.06
Col3a1P08121 Gm40810-201ENSMUST00000219149 253 ntBASIC2.2□□□□□ -2.06
Col3a1P08121 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.2□□□□□ -2.06
Col3a1P08121 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Col3a1P08121 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Col3a1P08121 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
Col3a1P08121 Gm33962-201ENSMUST00000182643 2592 ntBASIC2.2□□□□□ -2.06
Col3a1P08121 Gm15497-201ENSMUST00000119137 551 ntBASIC2.2□□□□□ -2.06
Col3a1P08121 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Col3a1P08121 Ighv15-1-201ENSMUST00000194450 276 ntBASIC2.2□□□□□ -2.06
Col3a1P08121 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
Col3a1P08121 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
Col3a1P08121 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
Col3a1P08121 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Col3a1P08121 Gm7123-201ENSMUST00000117647 213 ntBASIC2.19□□□□□ -2.06
Col3a1P08121 Gm12926-201ENSMUST00000121158 409 ntBASIC2.19□□□□□ -2.06
Col3a1P08121 Gm28344-201ENSMUST00000185704 279 ntBASIC2.19□□□□□ -2.06
Col3a1P08121 Trbv6-201ENSMUST00000193743 276 ntBASIC2.19□□□□□ -2.06
Col3a1P08121 Gm38238-201ENSMUST00000194334 346 ntBASIC2.19□□□□□ -2.06
Col3a1P08121 Gm24164-201ENSMUST00000093663 104 ntBASIC2.19□□□□□ -2.06
Col3a1P08121 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.18□□□□□ -2.06
Col3a1P08121 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 171.7 ms