Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm24164-201ENSMUST00000093663 104 ntBASIC1.4□□□□□ -2.19
P06344 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
P06344 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
P06344 Gm13714-201ENSMUST00000117313 221 ntBASIC1.39□□□□□ -2.19
P06344 Gm22315-201ENSMUST00000158010 143 ntBASIC1.39□□□□□ -2.19
P06344 Gm24277-201ENSMUST00000158661 104 ntBASIC1.39□□□□□ -2.19
P06344 Gm16162-201ENSMUST00000162296 297 ntBASIC1.39□□□□□ -2.19
P06344 Mir3057-201ENSMUST00000175040 91 ntBASIC1.39□□□□□ -2.19
P06344 Gm37763-201ENSMUST00000193445 120 ntBASIC1.39□□□□□ -2.19
P06344 AC125167.1-201ENSMUST00000198698 141 ntBASIC1.39□□□□□ -2.19
P06344 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC1.39□□□□□ -2.19
P06344 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC1.39□□□□□ -2.19
P06344 Gm23406-201ENSMUST00000082537 122 ntBASIC1.39□□□□□ -2.19
P06344 Mir320-201ENSMUST00000083594 82 ntBASIC1.39□□□□□ -2.19
P06344 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
P06344 Gm23941-201ENSMUST00000101953 107 ntBASIC1.38□□□□□ -2.19
P06344 Gm14937-201ENSMUST00000119709 208 ntBASIC1.38□□□□□ -2.19
P06344 Gm22479-201ENSMUST00000122566 81 ntBASIC1.38□□□□□ -2.19
P06344 Gm23656-201ENSMUST00000122626 112 ntBASIC1.38□□□□□ -2.19
P06344 Gm27511-201ENSMUST00000183502 127 ntBASIC1.38□□□□□ -2.19
P06344 Gm28453-203ENSMUST00000187041 189 ntBASIC1.38□□□□□ -2.19
P06344 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.38□□□□□ -2.19
P06344 Gm23370-201ENSMUST00000199545 130 ntBASIC1.38□□□□□ -2.19
P06344 Mir7227-201ENSMUST00000200408 59 ntBASIC1.38□□□□□ -2.19
P06344 Gm45005-201ENSMUST00000206640 157 ntBASIC1.38□□□□□ -2.19
P06344 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
P06344 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
P06344 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
P06344 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
P06344 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.37□□□□□ -2.19
P06344 Mir293-201ENSMUST00000104841 80 ntBASIC1.37□□□□□ -2.19
P06344 Gm6025-201ENSMUST00000121517 201 ntBASIC1.37□□□□□ -2.19
P06344 Gm13725-201ENSMUST00000122139 207 ntBASIC1.37□□□□□ -2.19
P06344 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.37□□□□□ -2.19
P06344 Gm23181-201ENSMUST00000158685 110 ntBASIC1.37□□□□□ -2.19
P06344 Gm25831-201ENSMUST00000158924 163 ntBASIC1.37□□□□□ -2.19
P06344 Gm25730-201ENSMUST00000178753 165 ntBASIC1.37□□□□□ -2.19
P06344 Gm37801-201ENSMUST00000194754 274 ntBASIC1.37□□□□□ -2.19
P06344 Mir3087-201ENSMUST00000199405 56 ntBASIC1.37□□□□□ -2.19
P06344 Gm45365-201ENSMUST00000209489 256 ntBASIC1.37□□□□□ -2.19
P06344 Gm5010-201ENSMUST00000213131 260 ntBASIC1.37□□□□□ -2.19
P06344 Gm29818-201ENSMUST00000218070 165 ntBASIC1.37□□□□□ -2.19
P06344 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.37□□□□□ -2.19
P06344 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC1.37□□□□□ -2.19
P06344 AC163295.1-201ENSMUST00000227840 314 ntBASIC1.37□□□□□ -2.19
P06344 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
P06344 Gm25357-201ENSMUST00000082745 72 ntBASIC1.37□□□□□ -2.19
P06344 Gm23055-201ENSMUST00000082805 94 ntBASIC1.37□□□□□ -2.19
P06344 Gm23345-201ENSMUST00000083817 150 ntBASIC1.37□□□□□ -2.19
P06344 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
P06344 Mir669i-201ENSMUST00000117007 127 ntBASIC1.36□□□□□ -2.19
P06344 Gm15115-201ENSMUST00000121145 264 ntBASIC1.36□□□□□ -2.19
P06344 Gm23718-201ENSMUST00000157350 307 ntBASIC1.36□□□□□ -2.19
P06344 Gm22883-201ENSMUST00000157376 106 ntBASIC1.36□□□□□ -2.19
P06344 Gm24668-201ENSMUST00000158935 104 ntBASIC1.36□□□□□ -2.19
P06344 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC1.36□□□□□ -2.19
P06344 Gm37693-201ENSMUST00000194562 234 ntBASIC1.36□□□□□ -2.19
P06344 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
P06344 Gm45616-201ENSMUST00000211711 319 ntBASIC1.36□□□□□ -2.19
P06344 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.36□□□□□ -2.19
P06344 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
P06344 Gm26080-201ENSMUST00000104069 131 ntBASIC1.35□□□□□ -2.19
P06344 Gm24283-201ENSMUST00000104233 107 ntBASIC1.35□□□□□ -2.19
P06344 Gm11794-201ENSMUST00000119446 237 ntBASIC1.35□□□□□ -2.19
P06344 Gm13967-201ENSMUST00000120404 380 ntBASIC1.35□□□□□ -2.19
P06344 Gm22216-201ENSMUST00000157557 114 ntBASIC1.35□□□□□ -2.19
P06344 Gm27421-201ENSMUST00000184729 167 ntBASIC1.35□□□□□ -2.19
P06344 Mir465d-201ENSMUST00000196314 58 ntBASIC1.35□□□□□ -2.19
P06344 Gm44962-201ENSMUST00000206460 279 ntBASIC1.35□□□□□ -2.19
P06344 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.35□□□□□ -2.19
P06344 Gm23100-201ENSMUST00000083455 141 ntBASIC1.35□□□□□ -2.19
P06344 Mir221-201ENSMUST00000083488 95 ntBASIC1.35□□□□□ -2.19
P06344 Mir181a-2-201ENSMUST00000083489 76 ntBASIC1.35□□□□□ -2.19
P06344 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.35□□□□□ -2.19
P06344 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.35□□□□□ -2.19
P06344 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.34□□□□□ -2.19
P06344 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.19
P06344 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
P06344 Gm12512-201ENSMUST00000119620 217 ntBASIC1.34□□□□□ -2.19
P06344 Gm11606-201ENSMUST00000120706 617 ntBASIC1.34□□□□□ -2.19
P06344 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.34□□□□□ -2.19
P06344 Gm27723-201ENSMUST00000157398 63 ntBASIC1.34□□□□□ -2.19
P06344 Gm22963-201ENSMUST00000157960 91 ntBASIC1.34□□□□□ -2.19
P06344 Gm24902-201ENSMUST00000158126 123 ntBASIC1.34□□□□□ -2.19
P06344 Gm24222-201ENSMUST00000158834 93 ntBASIC1.34□□□□□ -2.19
P06344 Gm25035-201ENSMUST00000175414 77 ntBASIC1.34□□□□□ -2.19
P06344 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.34□□□□□ -2.19
P06344 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.34□□□□□ -2.19
P06344 Gm22448-201ENSMUST00000179254 107 ntBASIC1.34□□□□□ -2.19
P06344 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
P06344 Gm42594-201ENSMUST00000199511 246 ntBASIC1.34□□□□□ -2.19
P06344 Gm44384-201ENSMUST00000200208 114 ntBASIC1.34□□□□□ -2.19
P06344 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.34□□□□□ -2.19
P06344 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.34□□□□□ -2.19
P06344 AC115735.2-201ENSMUST00000227135 351 ntBASIC1.34□□□□□ -2.19
P06344 Gm26447-201ENSMUST00000082448 129 ntBASIC1.34□□□□□ -2.19
P06344 Gm24764-201ENSMUST00000083686 199 ntBASIC1.34□□□□□ -2.19
P06344 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.33□□□□□ -2.2
P06344 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.33□□□□□ -2.2
P06344 Gm23214-201ENSMUST00000122716 157 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 572.4 ms