Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Gm23854-201ENSMUST00000158378 108 ntBASIC2.14□□□□□ -2.07
ShdO88834 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
ShdO88834 Gm45907-201ENSMUST00000213023 193 ntBASIC2.14□□□□□ -2.07
ShdO88834 AC239878.2-201ENSMUST00000224048 464 ntBASIC2.14□□□□□ -2.07
ShdO88834 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.14□□□□□ -2.07
ShdO88834 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
ShdO88834 Gm25094-201ENSMUST00000103992 131 ntBASIC2.13□□□□□ -2.07
ShdO88834 Gm24079-201ENSMUST00000104352 132 ntBASIC2.13□□□□□ -2.07
ShdO88834 Gm12941-201ENSMUST00000117934 220 ntBASIC2.13□□□□□ -2.07
ShdO88834 Gm24237-201ENSMUST00000157790 132 ntBASIC2.13□□□□□ -2.07
ShdO88834 Gm25994-201ENSMUST00000175392 101 ntBASIC2.13□□□□□ -2.07
ShdO88834 Snora15-201ENSMUST00000177461 131 ntBASIC2.13□□□□□ -2.07
ShdO88834 Gm23002-201ENSMUST00000179221 107 ntBASIC2.13□□□□□ -2.07
ShdO88834 Gm35736-201ENSMUST00000203681 313 ntBASIC2.13□□□□□ -2.07
ShdO88834 AC159896.1-201ENSMUST00000215264 215 ntBASIC2.13□□□□□ -2.07
ShdO88834 AC133598.3-201ENSMUST00000224322 568 ntBASIC2.13□□□□□ -2.07
ShdO88834 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
ShdO88834 Gm12797-201ENSMUST00000118645 273 ntBASIC2.12□□□□□ -2.07
ShdO88834 Gm13433-201ENSMUST00000121701 240 ntBASIC2.12□□□□□ -2.07
ShdO88834 Gm23390-201ENSMUST00000157393 106 ntBASIC2.12□□□□□ -2.07
ShdO88834 Gm25184-201ENSMUST00000157753 163 ntBASIC2.12□□□□□ -2.07
ShdO88834 Mir1951-201ENSMUST00000157981 89 ntBASIC2.12□□□□□ -2.07
ShdO88834 Gm22666-201ENSMUST00000158717 164 ntBASIC2.12□□□□□ -2.07
ShdO88834 AC125167.1-201ENSMUST00000198698 141 ntBASIC2.12□□□□□ -2.07
ShdO88834 AC127371.3-201ENSMUST00000228129 415 ntBASIC2.12□□□□□ -2.07
ShdO88834 Mir301-201ENSMUST00000083655 86 ntBASIC2.12□□□□□ -2.07
ShdO88834 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
ShdO88834 AC133934.2-201ENSMUST00000221729 4129 ntBASIC2.12□□□□□ -2.07
ShdO88834 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.12□□□□□ -2.07
ShdO88834 Gm12686-201ENSMUST00000120546 397 ntBASIC2.11□□□□□ -2.07
ShdO88834 Gm11204-201ENSMUST00000122438 147 ntBASIC2.11□□□□□ -2.07
ShdO88834 Gm15281-201ENSMUST00000125181 351 ntBASIC2.11□□□□□ -2.07
ShdO88834 Gm22075-201ENSMUST00000158599 192 ntBASIC2.11□□□□□ -2.07
ShdO88834 Gm23047-201ENSMUST00000177661 94 ntBASIC2.11□□□□□ -2.07
ShdO88834 Gm27722-201ENSMUST00000183908 76 ntBASIC2.11□□□□□ -2.07
ShdO88834 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC2.11□□□□□ -2.07
ShdO88834 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC2.11□□□□□ -2.07
ShdO88834 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
ShdO88834 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
ShdO88834 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
ShdO88834 Snord70-201ENSMUST00000104157 87 ntBASIC2.1□□□□□ -2.07
ShdO88834 Gm26022-201ENSMUST00000158663 108 ntBASIC2.1□□□□□ -2.07
ShdO88834 Gm16584-201ENSMUST00000159267 189 ntBASIC2.1□□□□□ -2.07
ShdO88834 Gm17113-201ENSMUST00000170118 171 ntBASIC2.1□□□□□ -2.07
ShdO88834 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
ShdO88834 Mir7050-201ENSMUST00000184636 60 ntBASIC2.1□□□□□ -2.07
ShdO88834 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.1□□□□□ -2.07
ShdO88834 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.1□□□□□ -2.07
ShdO88834 Mir881-201ENSMUST00000104844 78 ntBASIC2.09□□□□□ -2.07
ShdO88834 Gm24907-201ENSMUST00000116932 128 ntBASIC2.09□□□□□ -2.07
ShdO88834 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.09□□□□□ -2.07
ShdO88834 Gm27579-201ENSMUST00000158113 63 ntBASIC2.09□□□□□ -2.07
ShdO88834 Gm23342-201ENSMUST00000158958 115 ntBASIC2.09□□□□□ -2.07
ShdO88834 Gm22264-201ENSMUST00000178200 107 ntBASIC2.09□□□□□ -2.07
ShdO88834 Gm29022-201ENSMUST00000190702 225 ntBASIC2.09□□□□□ -2.07
ShdO88834 Gm22421-201ENSMUST00000083058 107 ntBASIC2.09□□□□□ -2.07
ShdO88834 Gm24412-201ENSMUST00000083426 109 ntBASIC2.09□□□□□ -2.07
ShdO88834 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
ShdO88834 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
ShdO88834 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.08□□□□□ -2.08
ShdO88834 Gm25460-201ENSMUST00000157954 127 ntBASIC2.08□□□□□ -2.08
ShdO88834 Gm25658-201ENSMUST00000158472 128 ntBASIC2.08□□□□□ -2.08
ShdO88834 Gm22664-201ENSMUST00000158719 105 ntBASIC2.08□□□□□ -2.08
ShdO88834 Gm23194-201ENSMUST00000158813 105 ntBASIC2.08□□□□□ -2.08
ShdO88834 Gm20477-201ENSMUST00000174028 280 ntBASIC2.08□□□□□ -2.08
ShdO88834 Gm25749-201ENSMUST00000175485 111 ntBASIC2.08□□□□□ -2.08
ShdO88834 Gm23571-201ENSMUST00000180073 127 ntBASIC2.08□□□□□ -2.08
ShdO88834 Gm27402-201ENSMUST00000183890 120 ntBASIC2.08□□□□□ -2.08
ShdO88834 Gm29308-201ENSMUST00000188863 315 ntBASIC2.08□□□□□ -2.08
ShdO88834 AC120540.2-201ENSMUST00000221716 387 ntBASIC2.08□□□□□ -2.08
ShdO88834 Gm24453-201ENSMUST00000083346 76 ntBASIC2.08□□□□□ -2.08
ShdO88834 Mir222-201ENSMUST00000083537 79 ntBASIC2.08□□□□□ -2.08
ShdO88834 Mir423-201ENSMUST00000083584 109 ntBASIC2.08□□□□□ -2.08
ShdO88834 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.08□□□□□ -2.08
ShdO88834 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
ShdO88834 Gm42862-201ENSMUST00000197494 2621 ntBASIC2.07□□□□□ -2.08
ShdO88834 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
ShdO88834 Gm15861-201ENSMUST00000120979 339 ntBASIC2.07□□□□□ -2.08
ShdO88834 Gm23548-201ENSMUST00000158963 106 ntBASIC2.07□□□□□ -2.08
ShdO88834 Mir7016-201ENSMUST00000184308 72 ntBASIC2.07□□□□□ -2.08
ShdO88834 Gm27443-201ENSMUST00000184660 98 ntBASIC2.07□□□□□ -2.08
ShdO88834 Gm27959-201ENSMUST00000185172 111 ntBASIC2.07□□□□□ -2.08
ShdO88834 Gm43865-201ENSMUST00000204721 127 ntBASIC2.07□□□□□ -2.08
ShdO88834 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC2.07□□□□□ -2.08
ShdO88834 AC154636.2-201ENSMUST00000222538 161 ntBASIC2.07□□□□□ -2.08
ShdO88834 Snora19-201ENSMUST00000082962 132 ntBASIC2.07□□□□□ -2.08
ShdO88834 Gm25402-201ENSMUST00000082966 131 ntBASIC2.07□□□□□ -2.08
ShdO88834 Gm23658-201ENSMUST00000083233 132 ntBASIC2.07□□□□□ -2.08
ShdO88834 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
ShdO88834 Gm26077-201ENSMUST00000104064 123 ntBASIC2.06□□□□□ -2.08
ShdO88834 Gm23705-201ENSMUST00000104370 130 ntBASIC2.06□□□□□ -2.08
ShdO88834 Mir669d-201ENSMUST00000104644 121 ntBASIC2.06□□□□□ -2.08
ShdO88834 Gm20630-201ENSMUST00000177387 551 ntBASIC2.06□□□□□ -2.08
ShdO88834 Gm6105-201ENSMUST00000200580 624 ntBASIC2.06□□□□□ -2.08
ShdO88834 AC126672.1-201ENSMUST00000217096 396 ntBASIC2.06□□□□□ -2.08
ShdO88834 CT954323.1-201ENSMUST00000222774 229 ntBASIC2.06□□□□□ -2.08
ShdO88834 Gm24042-201ENSMUST00000083114 103 ntBASIC2.06□□□□□ -2.08
ShdO88834 Mir155-201ENSMUST00000083463 65 ntBASIC2.06□□□□□ -2.08
ShdO88834 Mir322-201ENSMUST00000083484 95 ntBASIC2.06□□□□□ -2.08
ShdO88834 Gm25513-201ENSMUST00000083861 162 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 424.5 ms