Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Gm22294-201ENSMUST00000083308 104 ntBASIC1.45□□□□□ -2.18
ClppO88696 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.45□□□□□ -2.18
ClppO88696 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.45□□□□□ -2.18
ClppO88696 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
ClppO88696 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
ClppO88696 Gm6025-201ENSMUST00000121517 201 ntBASIC1.44□□□□□ -2.18
ClppO88696 Gm24895-201ENSMUST00000122742 74 ntBASIC1.44□□□□□ -2.18
ClppO88696 Gm25831-201ENSMUST00000158924 163 ntBASIC1.44□□□□□ -2.18
ClppO88696 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC1.44□□□□□ -2.18
ClppO88696 Gm22114-201ENSMUST00000177756 107 ntBASIC1.44□□□□□ -2.18
ClppO88696 Gm25936-201ENSMUST00000179952 114 ntBASIC1.44□□□□□ -2.18
ClppO88696 Gm28912-201ENSMUST00000189001 234 ntBASIC1.44□□□□□ -2.18
ClppO88696 Gm37693-201ENSMUST00000194562 234 ntBASIC1.44□□□□□ -2.18
ClppO88696 AC163295.1-201ENSMUST00000227840 314 ntBASIC1.44□□□□□ -2.18
ClppO88696 AC163646.2-201ENSMUST00000227962 141 ntBASIC1.44□□□□□ -2.18
ClppO88696 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.44□□□□□ -2.18
ClppO88696 Mir759-201ENSMUST00000103254 98 ntBASIC1.43□□□□□ -2.18
ClppO88696 Gm23907-201ENSMUST00000104595 189 ntBASIC1.43□□□□□ -2.18
ClppO88696 Mir293-201ENSMUST00000104841 80 ntBASIC1.43□□□□□ -2.18
ClppO88696 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC1.43□□□□□ -2.18
ClppO88696 Gm22215-201ENSMUST00000157558 96 ntBASIC1.43□□□□□ -2.18
ClppO88696 Gm22537-201ENSMUST00000158172 199 ntBASIC1.43□□□□□ -2.18
ClppO88696 Gm24174-201ENSMUST00000158933 111 ntBASIC1.43□□□□□ -2.18
ClppO88696 Gm23267-201ENSMUST00000178490 132 ntBASIC1.43□□□□□ -2.18
ClppO88696 Gm27540-201ENSMUST00000184950 187 ntBASIC1.43□□□□□ -2.18
ClppO88696 Gm28418-201ENSMUST00000186179 423 ntBASIC1.43□□□□□ -2.18
ClppO88696 Gm44308-201ENSMUST00000197080 99 ntBASIC1.43□□□□□ -2.18
ClppO88696 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.42□□□□□ -2.18
ClppO88696 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
ClppO88696 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
ClppO88696 Gm24116-201ENSMUST00000103975 107 ntBASIC1.42□□□□□ -2.18
ClppO88696 Gm22491-201ENSMUST00000157190 102 ntBASIC1.42□□□□□ -2.18
ClppO88696 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.42□□□□□ -2.18
ClppO88696 Gm23474-201ENSMUST00000158884 75 ntBASIC1.42□□□□□ -2.18
ClppO88696 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC1.42□□□□□ -2.18
ClppO88696 Gm7958-201ENSMUST00000178255 468 ntBASIC1.42□□□□□ -2.18
ClppO88696 Gm7950-201ENSMUST00000179633 468 ntBASIC1.42□□□□□ -2.18
ClppO88696 Gm27326-201ENSMUST00000183504 95 ntBASIC1.42□□□□□ -2.18
ClppO88696 Gm29661-201ENSMUST00000186781 315 ntBASIC1.42□□□□□ -2.18
ClppO88696 Gm29308-201ENSMUST00000188863 315 ntBASIC1.42□□□□□ -2.18
ClppO88696 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.42□□□□□ -2.18
ClppO88696 Gm45543-201ENSMUST00000209327 88 ntBASIC1.42□□□□□ -2.18
ClppO88696 AC145736.2-201ENSMUST00000216305 365 ntBASIC1.42□□□□□ -2.18
ClppO88696 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.42□□□□□ -2.18
ClppO88696 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.41□□□□□ -2.18
ClppO88696 Gm25759-201ENSMUST00000103988 129 ntBASIC1.41□□□□□ -2.18
ClppO88696 Defb44-ps-201ENSMUST00000126871 219 ntBASIC1.41□□□□□ -2.18
ClppO88696 Gm24277-201ENSMUST00000158661 104 ntBASIC1.41□□□□□ -2.18
ClppO88696 Gm17113-201ENSMUST00000170118 171 ntBASIC1.41□□□□□ -2.18
ClppO88696 Gm29037-201ENSMUST00000189092 313 ntBASIC1.41□□□□□ -2.18
ClppO88696 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC1.41□□□□□ -2.18
ClppO88696 Gm43911-201ENSMUST00000203097 76 ntBASIC1.41□□□□□ -2.18
ClppO88696 Gm24966-201ENSMUST00000082443 79 ntBASIC1.41□□□□□ -2.18
ClppO88696 Gm26111-201ENSMUST00000083969 106 ntBASIC1.41□□□□□ -2.18
ClppO88696 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.41□□□□□ -2.18
ClppO88696 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
ClppO88696 Gm25495-201ENSMUST00000104431 131 ntBASIC1.4□□□□□ -2.19
ClppO88696 Gm23221-201ENSMUST00000158118 93 ntBASIC1.4□□□□□ -2.19
ClppO88696 Gm23967-201ENSMUST00000175062 78 ntBASIC1.4□□□□□ -2.19
ClppO88696 Gm21064-202ENSMUST00000190583 278 ntBASIC1.4□□□□□ -2.19
ClppO88696 Gm37763-201ENSMUST00000193445 120 ntBASIC1.4□□□□□ -2.19
ClppO88696 Mir3535-201ENSMUST00000197651 147 ntBASIC1.4□□□□□ -2.19
ClppO88696 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC1.4□□□□□ -2.19
ClppO88696 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC1.4□□□□□ -2.19
ClppO88696 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.4□□□□□ -2.19
ClppO88696 Gm25793-201ENSMUST00000083287 107 ntBASIC1.4□□□□□ -2.19
ClppO88696 CT030170.3-201ENSMUST00000221205 1815 ntBASIC1.39□□□□□ -2.19
ClppO88696 Gm25068-201ENSMUST00000103895 110 ntBASIC1.39□□□□□ -2.19
ClppO88696 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC1.39□□□□□ -2.19
ClppO88696 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.39□□□□□ -2.19
ClppO88696 Gm14922-201ENSMUST00000121131 163 ntBASIC1.39□□□□□ -2.19
ClppO88696 Gm15115-201ENSMUST00000121145 264 ntBASIC1.39□□□□□ -2.19
ClppO88696 Gm23208-201ENSMUST00000158666 127 ntBASIC1.39□□□□□ -2.19
ClppO88696 Gm24677-201ENSMUST00000158755 150 ntBASIC1.39□□□□□ -2.19
ClppO88696 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.39□□□□□ -2.19
ClppO88696 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
ClppO88696 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.39□□□□□ -2.19
ClppO88696 Mir376a-201ENSMUST00000197584 68 ntBASIC1.39□□□□□ -2.19
ClppO88696 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.39□□□□□ -2.19
ClppO88696 AC132437.1-201ENSMUST00000218308 320 ntBASIC1.39□□□□□ -2.19
ClppO88696 AC163033.1-201ENSMUST00000218608 157 ntBASIC1.39□□□□□ -2.19
ClppO88696 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.39□□□□□ -2.19
ClppO88696 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
ClppO88696 Mir221-201ENSMUST00000083488 95 ntBASIC1.39□□□□□ -2.19
ClppO88696 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.39□□□□□ -2.19
ClppO88696 Gm26135-201ENSMUST00000101993 72 ntBASIC1.38□□□□□ -2.19
ClppO88696 Gm22814-201ENSMUST00000157452 104 ntBASIC1.38□□□□□ -2.19
ClppO88696 Gm22944-201ENSMUST00000158662 133 ntBASIC1.38□□□□□ -2.19
ClppO88696 Snord50b-201ENSMUST00000178497 72 ntBASIC1.38□□□□□ -2.19
ClppO88696 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC1.38□□□□□ -2.19
ClppO88696 Gm44858-201ENSMUST00000207360 154 ntBASIC1.38□□□□□ -2.19
ClppO88696 Gm25079-201ENSMUST00000082529 203 ntBASIC1.38□□□□□ -2.19
ClppO88696 Mir767-201ENSMUST00000103256 107 ntBASIC1.37□□□□□ -2.19
ClppO88696 Gm13967-201ENSMUST00000120404 380 ntBASIC1.37□□□□□ -2.19
ClppO88696 Gm25318-201ENSMUST00000122554 314 ntBASIC1.37□□□□□ -2.19
ClppO88696 Gm26049-201ENSMUST00000157313 108 ntBASIC1.37□□□□□ -2.19
ClppO88696 Gm17919-201ENSMUST00000173344 312 ntBASIC1.37□□□□□ -2.19
ClppO88696 Gm27894-201ENSMUST00000184177 92 ntBASIC1.37□□□□□ -2.19
ClppO88696 Gm28110-201ENSMUST00000185782 315 ntBASIC1.37□□□□□ -2.19
ClppO88696 Gm29057-201ENSMUST00000186468 315 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms