Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Gm38019-201ENSMUST00000195133 380 ntBASIC1.93□□□□□ -2.1
Smarce1O54941 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC1.93□□□□□ -2.1
Smarce1O54941 Hmgb1l-201ENSMUST00000082150 571 ntBASIC1.93□□□□□ -2.1
Smarce1O54941 Mir322-201ENSMUST00000083484 95 ntBASIC1.93□□□□□ -2.1
Smarce1O54941 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
Smarce1O54941 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Smarce1O54941 Gm24440-201ENSMUST00000157236 63 ntBASIC1.92□□□□□ -2.1
Smarce1O54941 Gm24512-201ENSMUST00000174963 65 ntBASIC1.92□□□□□ -2.1
Smarce1O54941 Mir6388-201ENSMUST00000184417 75 ntBASIC1.92□□□□□ -2.1
Smarce1O54941 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.92□□□□□ -2.1
Smarce1O54941 Mir378a-201ENSMUST00000198300 66 ntBASIC1.92□□□□□ -2.1
Smarce1O54941 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.91□□□□□ -2.1
Smarce1O54941 Gm26135-201ENSMUST00000101993 72 ntBASIC1.91□□□□□ -2.1
Smarce1O54941 Gm25111-201ENSMUST00000116686 147 ntBASIC1.91□□□□□ -2.1
Smarce1O54941 Gm22321-201ENSMUST00000157152 104 ntBASIC1.91□□□□□ -2.1
Smarce1O54941 Gm22603-201ENSMUST00000157603 96 ntBASIC1.91□□□□□ -2.1
Smarce1O54941 Gm23181-201ENSMUST00000158685 110 ntBASIC1.91□□□□□ -2.1
Smarce1O54941 Mir3086-201ENSMUST00000175072 87 ntBASIC1.91□□□□□ -2.1
Smarce1O54941 Mir3103-201ENSMUST00000175474 67 ntBASIC1.91□□□□□ -2.1
Smarce1O54941 Snord50b-201ENSMUST00000178497 72 ntBASIC1.91□□□□□ -2.1
Smarce1O54941 Mir7068-201ENSMUST00000183439 74 ntBASIC1.91□□□□□ -2.1
Smarce1O54941 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.91□□□□□ -2.1
Smarce1O54941 Gm45907-201ENSMUST00000213023 193 ntBASIC1.91□□□□□ -2.1
Smarce1O54941 AC125374.2-201ENSMUST00000214278 162 ntBASIC1.91□□□□□ -2.1
Smarce1O54941 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.91□□□□□ -2.1
Smarce1O54941 Gm25357-201ENSMUST00000082745 72 ntBASIC1.91□□□□□ -2.1
Smarce1O54941 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Smarce1O54941 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Smarce1O54941 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Smarce1O54941 Gm23536-201ENSMUST00000157541 134 ntBASIC1.9□□□□□ -2.11
Smarce1O54941 Gm16584-201ENSMUST00000159267 189 ntBASIC1.9□□□□□ -2.11
Smarce1O54941 Snord87-201ENSMUST00000175437 87 ntBASIC1.9□□□□□ -2.11
Smarce1O54941 Gm27959-201ENSMUST00000185172 111 ntBASIC1.9□□□□□ -2.11
Smarce1O54941 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.9□□□□□ -2.11
Smarce1O54941 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.9□□□□□ -2.11
Smarce1O54941 AC173482.5-201ENSMUST00000224181 327 ntBASIC1.9□□□□□ -2.11
Smarce1O54941 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
Smarce1O54941 AC164297.1-201ENSMUST00000224484 1561 ntBASIC1.89□□□□□ -2.11
Smarce1O54941 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.89□□□□□ -2.11
Smarce1O54941 Gm15861-201ENSMUST00000120979 339 ntBASIC1.89□□□□□ -2.11
Smarce1O54941 Gm26181-201ENSMUST00000157687 106 ntBASIC1.89□□□□□ -2.11
Smarce1O54941 Gm24851-201ENSMUST00000158028 103 ntBASIC1.89□□□□□ -2.11
Smarce1O54941 Gm22075-201ENSMUST00000158599 192 ntBASIC1.89□□□□□ -2.11
Smarce1O54941 Gm25707-201ENSMUST00000175120 96 ntBASIC1.89□□□□□ -2.11
Smarce1O54941 Gm22118-201ENSMUST00000175593 171 ntBASIC1.89□□□□□ -2.11
Smarce1O54941 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.89□□□□□ -2.11
Smarce1O54941 Gm44352-201ENSMUST00000196358 110 ntBASIC1.89□□□□□ -2.11
Smarce1O54941 Gm42774-201ENSMUST00000198854 283 ntBASIC1.89□□□□□ -2.11
Smarce1O54941 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Smarce1O54941 Gm5010-201ENSMUST00000213131 260 ntBASIC1.89□□□□□ -2.11
Smarce1O54941 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.89□□□□□ -2.11
Smarce1O54941 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.89□□□□□ -2.11
Smarce1O54941 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Smarce1O54941 Gm24204-201ENSMUST00000082950 107 ntBASIC1.89□□□□□ -2.11
Smarce1O54941 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.88□□□□□ -2.11
Smarce1O54941 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Smarce1O54941 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Smarce1O54941 Gm24909-201ENSMUST00000157290 280 ntBASIC1.88□□□□□ -2.11
Smarce1O54941 Gm26024-201ENSMUST00000158657 322 ntBASIC1.88□□□□□ -2.11
Smarce1O54941 Gm24174-201ENSMUST00000158933 111 ntBASIC1.88□□□□□ -2.11
Smarce1O54941 Mir5118-201ENSMUST00000175551 67 ntBASIC1.88□□□□□ -2.11
Smarce1O54941 Gm25615-201ENSMUST00000177836 94 ntBASIC1.88□□□□□ -2.11
Smarce1O54941 Mir7679-201ENSMUST00000183379 63 ntBASIC1.88□□□□□ -2.11
Smarce1O54941 Gm44962-201ENSMUST00000206460 279 ntBASIC1.88□□□□□ -2.11
Smarce1O54941 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.88□□□□□ -2.11
Smarce1O54941 Gm45365-201ENSMUST00000209489 256 ntBASIC1.88□□□□□ -2.11
Smarce1O54941 AC098718.2-201ENSMUST00000226822 285 ntBASIC1.88□□□□□ -2.11
Smarce1O54941 Gm24042-201ENSMUST00000083114 103 ntBASIC1.88□□□□□ -2.11
Smarce1O54941 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Smarce1O54941 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Smarce1O54941 Gm23172-201ENSMUST00000157160 124 ntBASIC1.87□□□□□ -2.11
Smarce1O54941 Gm22264-201ENSMUST00000178200 107 ntBASIC1.87□□□□□ -2.11
Smarce1O54941 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.87□□□□□ -2.11
Smarce1O54941 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Smarce1O54941 Gm10360-201ENSMUST00000097219 272 ntBASIC1.87□□□□□ -2.11
Smarce1O54941 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Smarce1O54941 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.86□□□□□ -2.11
Smarce1O54941 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.86□□□□□ -2.11
Smarce1O54941 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Smarce1O54941 Gm23109-201ENSMUST00000116867 126 ntBASIC1.86□□□□□ -2.11
Smarce1O54941 Gm25664-201ENSMUST00000157697 107 ntBASIC1.86□□□□□ -2.11
Smarce1O54941 Gm26022-201ENSMUST00000158663 108 ntBASIC1.86□□□□□ -2.11
Smarce1O54941 Gm22450-201ENSMUST00000179641 107 ntBASIC1.86□□□□□ -2.11
Smarce1O54941 Gm25473-201ENSMUST00000180191 107 ntBASIC1.86□□□□□ -2.11
Smarce1O54941 Mir6997-201ENSMUST00000184313 71 ntBASIC1.86□□□□□ -2.11
Smarce1O54941 Gm27332-201ENSMUST00000184893 112 ntBASIC1.86□□□□□ -2.11
Smarce1O54941 Gm37693-201ENSMUST00000194562 234 ntBASIC1.86□□□□□ -2.11
Smarce1O54941 Gm24856-201ENSMUST00000082809 107 ntBASIC1.86□□□□□ -2.11
Smarce1O54941 Gm26071-201ENSMUST00000083261 107 ntBASIC1.86□□□□□ -2.11
Smarce1O54941 Gm25513-201ENSMUST00000083861 162 ntBASIC1.86□□□□□ -2.11
Smarce1O54941 Gm24521-201ENSMUST00000083958 107 ntBASIC1.86□□□□□ -2.11
Smarce1O54941 Gm23390-201ENSMUST00000157393 106 ntBASIC1.85□□□□□ -2.11
Smarce1O54941 Gm23182-201ENSMUST00000158688 135 ntBASIC1.85□□□□□ -2.11
Smarce1O54941 Gm24222-201ENSMUST00000158834 93 ntBASIC1.85□□□□□ -2.11
Smarce1O54941 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.85□□□□□ -2.11
Smarce1O54941 Mir6352-201ENSMUST00000184495 116 ntBASIC1.85□□□□□ -2.11
Smarce1O54941 Mir7241-201ENSMUST00000184532 64 ntBASIC1.85□□□□□ -2.11
Smarce1O54941 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.85□□□□□ -2.11
Smarce1O54941 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC1.85□□□□□ -2.11
Smarce1O54941 Gm23370-201ENSMUST00000199545 130 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms