Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm26200-201ENSMUST00000180273 79 ntBASIC0.1□□□□□ -2.39
Hmgb3O54879 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC0.1□□□□□ -2.39
Hmgb3O54879 Gm44960-201ENSMUST00000207403 141 ntBASIC0.1□□□□□ -2.39
Hmgb3O54879 Gm23622-201ENSMUST00000082460 107 ntBASIC0.1□□□□□ -2.39
Hmgb3O54879 Gm25697-201ENSMUST00000082902 98 ntBASIC0.1□□□□□ -2.39
Hmgb3O54879 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.09□□□□□ -2.39
Hmgb3O54879 Gm22786-201ENSMUST00000104086 122 ntBASIC0.09□□□□□ -2.4
Hmgb3O54879 Gm22733-201ENSMUST00000158094 91 ntBASIC0.09□□□□□ -2.4
Hmgb3O54879 Gm20391-201ENSMUST00000174722 106 ntBASIC0.09□□□□□ -2.4
Hmgb3O54879 Gm23523-201ENSMUST00000180190 107 ntBASIC0.09□□□□□ -2.4
Hmgb3O54879 Mir7050-201ENSMUST00000184636 60 ntBASIC0.09□□□□□ -2.4
Hmgb3O54879 Gm27656-201ENSMUST00000185055 80 ntBASIC0.09□□□□□ -2.4
Hmgb3O54879 Gm37128-201ENSMUST00000192599 232 ntBASIC0.09□□□□□ -2.4
Hmgb3O54879 Gm29817-201ENSMUST00000210098 172 ntBASIC0.09□□□□□ -2.4
Hmgb3O54879 Gm45541-201ENSMUST00000210443 54 ntBASIC0.09□□□□□ -2.4
Hmgb3O54879 AC164629.1-201ENSMUST00000220250 1113 ntBASIC0.09□□□□□ -2.4
Hmgb3O54879 AC100209.2-201ENSMUST00000224461 451 ntBASIC0.09□□□□□ -2.4
Hmgb3O54879 Gm22578-201ENSMUST00000083730 107 ntBASIC0.09□□□□□ -2.4
Hmgb3O54879 Mir500-201ENSMUST00000093600 92 ntBASIC0.09□□□□□ -2.4
Hmgb3O54879 Gm10033-201ENSMUST00000072427 1813 ntBASIC0.08□□□□□ -2.4
Hmgb3O54879 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
Hmgb3O54879 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
Hmgb3O54879 Mir654-201ENSMUST00000104787 84 ntBASIC0.08□□□□□ -2.4
Hmgb3O54879 Gm6985-201ENSMUST00000121255 271 ntBASIC0.08□□□□□ -2.4
Hmgb3O54879 Gm24198-201ENSMUST00000157812 108 ntBASIC0.08□□□□□ -2.4
Hmgb3O54879 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC0.08□□□□□ -2.4
Hmgb3O54879 Gm43513-201ENSMUST00000199779 1076 ntBASIC0.08□□□□□ -2.4
Hmgb3O54879 AC192616.3-201ENSMUST00000220797 1124 ntBASIC0.08□□□□□ -2.4
Hmgb3O54879 Gm24833-201ENSMUST00000116775 120 ntBASIC0.07□□□□□ -2.4
Hmgb3O54879 Gm11410-201ENSMUST00000120053 1143 ntBASIC0.07□□□□□ -2.4
Hmgb3O54879 Gm23898-201ENSMUST00000158111 103 ntBASIC0.07□□□□□ -2.4
Hmgb3O54879 Gm18417-201ENSMUST00000176564 648 ntBASIC0.07□□□□□ -2.4
Hmgb3O54879 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC0.07□□□□□ -2.4
Hmgb3O54879 Gm27385-201ENSMUST00000184747 104 ntBASIC0.07□□□□□ -2.4
Hmgb3O54879 Gm20144-201ENSMUST00000203031 165 ntBASIC0.07□□□□□ -2.4
Hmgb3O54879 Gm44948-201ENSMUST00000209050 149 ntBASIC0.07□□□□□ -2.4
Hmgb3O54879 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.07□□□□□ -2.4
Hmgb3O54879 Snord38a-201ENSMUST00000083746 71 ntBASIC0.07□□□□□ -2.4
Hmgb3O54879 AC133079.1-201ENSMUST00000220943 1881 ntBASIC0.07□□□□□ -2.4
Hmgb3O54879 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC0.06□□□□□ -2.4
Hmgb3O54879 Gm23169-201ENSMUST00000157157 112 ntBASIC0.06□□□□□ -2.4
Hmgb3O54879 Gm16546-201ENSMUST00000159442 355 ntBASIC0.06□□□□□ -2.4
Hmgb3O54879 Mir3108-201ENSMUST00000175500 79 ntBASIC0.06□□□□□ -2.4
Hmgb3O54879 Gm43810-201ENSMUST00000201018 232 ntBASIC0.06□□□□□ -2.4
Hmgb3O54879 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC0.06□□□□□ -2.4
Hmgb3O54879 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.06□□□□□ -2.4
Hmgb3O54879 Gm25789-201ENSMUST00000083294 76 ntBASIC0.06□□□□□ -2.4
Hmgb3O54879 Gm22469-201ENSMUST00000104118 133 ntBASIC0.05□□□□□ -2.4
Hmgb3O54879 Gm24005-201ENSMUST00000158459 296 ntBASIC0.05□□□□□ -2.4
Hmgb3O54879 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC0.05□□□□□ -2.4
Hmgb3O54879 Gm25952-201ENSMUST00000175329 74 ntBASIC0.05□□□□□ -2.4
Hmgb3O54879 Gm27659-201ENSMUST00000183472 98 ntBASIC0.05□□□□□ -2.4
Hmgb3O54879 AC124542.1-201ENSMUST00000205588 908 ntBASIC0.05□□□□□ -2.4
Hmgb3O54879 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC0.05□□□□□ -2.4
Hmgb3O54879 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC0.05□□□□□ -2.4
Hmgb3O54879 AC109212.1-201ENSMUST00000215561 427 ntBASIC0.05□□□□□ -2.4
Hmgb3O54879 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC0.05□□□□□ -2.4
Hmgb3O54879 Gm24355-201ENSMUST00000082858 122 ntBASIC0.05□□□□□ -2.4
Hmgb3O54879 Gm25404-201ENSMUST00000082970 107 ntBASIC0.05□□□□□ -2.4
Hmgb3O54879 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
Hmgb3O54879 Mir701-201ENSMUST00000102208 109 ntBASIC0.04□□□□□ -2.4
Hmgb3O54879 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
Hmgb3O54879 Mir190b-201ENSMUST00000104803 80 ntBASIC0.04□□□□□ -2.4
Hmgb3O54879 Gm16358-201ENSMUST00000146046 210 ntBASIC0.04□□□□□ -2.4
Hmgb3O54879 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC0.04□□□□□ -2.4
Hmgb3O54879 Gm22914-201ENSMUST00000175195 77 ntBASIC0.04□□□□□ -2.4
Hmgb3O54879 Gm17067-202ENSMUST00000180131 123 ntBASIC0.04□□□□□ -2.4
Hmgb3O54879 Gm29640-201ENSMUST00000187972 278 ntBASIC0.04□□□□□ -2.4
Hmgb3O54879 Gm38261-201ENSMUST00000192608 316 ntBASIC0.04□□□□□ -2.4
Hmgb3O54879 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC0.04□□□□□ -2.4
Hmgb3O54879 Gm44923-201ENSMUST00000206673 85 ntBASIC0.04□□□□□ -2.4
Hmgb3O54879 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC0.04□□□□□ -2.4
Hmgb3O54879 AC159297.2-201ENSMUST00000219567 1075 ntBASIC0.04□□□□□ -2.4
Hmgb3O54879 Mir411-201ENSMUST00000083543 82 ntBASIC0.04□□□□□ -2.4
Hmgb3O54879 Gm6272-201ENSMUST00000121256 171 ntBASIC0.03□□□□□ -2.4
Hmgb3O54879 Gm22888-201ENSMUST00000158640 77 ntBASIC0.03□□□□□ -2.4
Hmgb3O54879 Gm23340-201ENSMUST00000158955 123 ntBASIC0.03□□□□□ -2.4
Hmgb3O54879 Gm16539-201ENSMUST00000160086 327 ntBASIC0.03□□□□□ -2.4
Hmgb3O54879 Gm24308-201ENSMUST00000177773 114 ntBASIC0.03□□□□□ -2.4
Hmgb3O54879 Mir496b-201ENSMUST00000184935 113 ntBASIC0.03□□□□□ -2.4
Hmgb3O54879 Gm37641-201ENSMUST00000193837 239 ntBASIC0.03□□□□□ -2.4
Hmgb3O54879 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
Hmgb3O54879 Gm8219-201ENSMUST00000218309 242 ntBASIC0.03□□□□□ -2.4
Hmgb3O54879 Gm25627-201ENSMUST00000084003 153 ntBASIC0.03□□□□□ -2.4
Hmgb3O54879 Mir710-201ENSMUST00000102088 110 ntBASIC0.02□□□□□ -2.41
Hmgb3O54879 Mir1b-201ENSMUST00000117012 122 ntBASIC0.02□□□□□ -2.41
Hmgb3O54879 Gm15379-201ENSMUST00000121224 648 ntBASIC0.02□□□□□ -2.41
Hmgb3O54879 Gm24517-201ENSMUST00000122560 107 ntBASIC0.02□□□□□ -2.41
Hmgb3O54879 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.02□□□□□ -2.41
Hmgb3O54879 Gm23435-201ENSMUST00000157183 156 ntBASIC0.02□□□□□ -2.41
Hmgb3O54879 Scarna8-201ENSMUST00000158333 131 ntBASIC0.02□□□□□ -2.41
Hmgb3O54879 Gm23853-201ENSMUST00000158375 104 ntBASIC0.02□□□□□ -2.41
Hmgb3O54879 Gm22200-201ENSMUST00000158614 67 ntBASIC0.02□□□□□ -2.41
Hmgb3O54879 Gm24618-201ENSMUST00000177718 94 ntBASIC0.02□□□□□ -2.41
Hmgb3O54879 Gm23953-201ENSMUST00000178214 94 ntBASIC0.02□□□□□ -2.41
Hmgb3O54879 Gm26332-201ENSMUST00000179813 94 ntBASIC0.02□□□□□ -2.41
Hmgb3O54879 Gm22863-201ENSMUST00000180265 94 ntBASIC0.02□□□□□ -2.41
Hmgb3O54879 Gm44142-201ENSMUST00000203358 311 ntBASIC0.02□□□□□ -2.41
Hmgb3O54879 Gm45403-201ENSMUST00000209453 276 ntBASIC0.02□□□□□ -2.41
Hmgb3O54879 Gm23321-201ENSMUST00000104465 126 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms