Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
Sdc4O35988 Gm26484-201ENSMUST00000158018 106 ntBASIC0.3□□□□□ -2.36
Sdc4O35988 Gm24768-201ENSMUST00000158512 94 ntBASIC0.3□□□□□ -2.36
Sdc4O35988 Mir15a-201ENSMUST00000175266 84 ntBASIC0.3□□□□□ -2.36
Sdc4O35988 Gm22851-201ENSMUST00000178741 94 ntBASIC0.3□□□□□ -2.36
Sdc4O35988 Gm25074-201ENSMUST00000178782 94 ntBASIC0.3□□□□□ -2.36
Sdc4O35988 Gm27289-201ENSMUST00000183341 82 ntBASIC0.3□□□□□ -2.36
Sdc4O35988 Gm27793-201ENSMUST00000183405 76 ntBASIC0.3□□□□□ -2.36
Sdc4O35988 Gm27236-201ENSMUST00000184147 442 ntBASIC0.3□□□□□ -2.36
Sdc4O35988 Mir496b-201ENSMUST00000184935 113 ntBASIC0.3□□□□□ -2.36
Sdc4O35988 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC0.3□□□□□ -2.36
Sdc4O35988 Gm34783-201ENSMUST00000209159 303 ntBASIC0.3□□□□□ -2.36
Sdc4O35988 Gm45315-201ENSMUST00000209283 333 ntBASIC0.3□□□□□ -2.36
Sdc4O35988 Gm45403-201ENSMUST00000209453 276 ntBASIC0.3□□□□□ -2.36
Sdc4O35988 AC159297.2-201ENSMUST00000219567 1075 ntBASIC0.3□□□□□ -2.36
Sdc4O35988 Gm23140-201ENSMUST00000082487 107 ntBASIC0.3□□□□□ -2.36
Sdc4O35988 Mir224-201ENSMUST00000083608 82 ntBASIC0.3□□□□□ -2.36
Sdc4O35988 Gm25378-201ENSMUST00000104333 129 ntBASIC0.29□□□□□ -2.36
Sdc4O35988 Mir1197-201ENSMUST00000117037 120 ntBASIC0.29□□□□□ -2.36
Sdc4O35988 Gm12433-201ENSMUST00000119659 255 ntBASIC0.29□□□□□ -2.36
Sdc4O35988 Gm26152-201ENSMUST00000157427 101 ntBASIC0.29□□□□□ -2.36
Sdc4O35988 Gm23542-201ENSMUST00000158208 96 ntBASIC0.29□□□□□ -2.36
Sdc4O35988 Gm27385-201ENSMUST00000184747 104 ntBASIC0.29□□□□□ -2.36
Sdc4O35988 Gm28992-201ENSMUST00000190534 139 ntBASIC0.29□□□□□ -2.36
Sdc4O35988 Gm37641-201ENSMUST00000193837 239 ntBASIC0.29□□□□□ -2.36
Sdc4O35988 Gm33654-201ENSMUST00000221704 215 ntBASIC0.29□□□□□ -2.36
Sdc4O35988 CT009733.1-203ENSMUST00000224033 451 ntBASIC0.29□□□□□ -2.36
Sdc4O35988 DQ267101-201ENSMUST00000082562 73 ntBASIC0.29□□□□□ -2.36
Sdc4O35988 Gm22884-201ENSMUST00000083127 140 ntBASIC0.29□□□□□ -2.36
Sdc4O35988 Gm25207-201ENSMUST00000093745 107 ntBASIC0.29□□□□□ -2.36
Sdc4O35988 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.29□□□□□ -2.36
Sdc4O35988 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
Sdc4O35988 Mir710-201ENSMUST00000102088 110 ntBASIC0.28□□□□□ -2.36
Sdc4O35988 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC0.28□□□□□ -2.36
Sdc4O35988 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC0.28□□□□□ -2.36
Sdc4O35988 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.28□□□□□ -2.36
Sdc4O35988 n-R5s63-201ENSMUST00000122756 103 ntBASIC0.28□□□□□ -2.36
Sdc4O35988 Gm23411-201ENSMUST00000157988 62 ntBASIC0.28□□□□□ -2.36
Sdc4O35988 Gm24772-201ENSMUST00000158507 110 ntBASIC0.28□□□□□ -2.36
Sdc4O35988 Mir468-201ENSMUST00000197332 78 ntBASIC0.28□□□□□ -2.36
Sdc4O35988 Gm43220-201ENSMUST00000199299 282 ntBASIC0.28□□□□□ -2.36
Sdc4O35988 Gm44921-201ENSMUST00000205290 301 ntBASIC0.28□□□□□ -2.36
Sdc4O35988 Gm44960-201ENSMUST00000207403 141 ntBASIC0.28□□□□□ -2.36
Sdc4O35988 AC164297.3-201ENSMUST00000224238 94 ntBASIC0.28□□□□□ -2.36
Sdc4O35988 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
Sdc4O35988 Gm24625-201ENSMUST00000082622 130 ntBASIC0.28□□□□□ -2.36
Sdc4O35988 Gm24355-201ENSMUST00000082858 122 ntBASIC0.28□□□□□ -2.36
Sdc4O35988 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.28□□□□□ -2.36
Sdc4O35988 Mir463-201ENSMUST00000093570 75 ntBASIC0.28□□□□□ -2.36
Sdc4O35988 AC154515.1-201ENSMUST00000226085 2841 ntBASIC0.27□□□□□ -2.37
Sdc4O35988 Gm26500-201ENSMUST00000101867 106 ntBASIC0.27□□□□□ -2.37
Sdc4O35988 Mir872-201ENSMUST00000104728 81 ntBASIC0.27□□□□□ -2.37
Sdc4O35988 n-R5s207-201ENSMUST00000122497 118 ntBASIC0.27□□□□□ -2.37
Sdc4O35988 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
Sdc4O35988 Gm22706-201ENSMUST00000157907 112 ntBASIC0.27□□□□□ -2.37
Sdc4O35988 Gm25486-201ENSMUST00000158726 63 ntBASIC0.27□□□□□ -2.37
Sdc4O35988 Gm20391-201ENSMUST00000174722 106 ntBASIC0.27□□□□□ -2.37
Sdc4O35988 Mir7077-201ENSMUST00000183991 57 ntBASIC0.27□□□□□ -2.37
Sdc4O35988 Gm28661-201ENSMUST00000188231 681 ntBASIC0.27□□□□□ -2.37
Sdc4O35988 Gm29229-201ENSMUST00000188874 323 ntBASIC0.27□□□□□ -2.37
Sdc4O35988 Gm37918-201ENSMUST00000192071 120 ntBASIC0.27□□□□□ -2.37
Sdc4O35988 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC0.27□□□□□ -2.37
Sdc4O35988 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC0.27□□□□□ -2.37
Sdc4O35988 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.27□□□□□ -2.37
Sdc4O35988 Gm24966-201ENSMUST00000082443 79 ntBASIC0.27□□□□□ -2.37
Sdc4O35988 Mir490-201ENSMUST00000093567 84 ntBASIC0.27□□□□□ -2.37
Sdc4O35988 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
Sdc4O35988 Gm25968-201ENSMUST00000157167 100 ntBASIC0.26□□□□□ -2.37
Sdc4O35988 Gm24308-201ENSMUST00000177773 114 ntBASIC0.26□□□□□ -2.37
Sdc4O35988 Gm24315-201ENSMUST00000177835 127 ntBASIC0.26□□□□□ -2.37
Sdc4O35988 Gm20144-201ENSMUST00000203031 165 ntBASIC0.26□□□□□ -2.37
Sdc4O35988 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.26□□□□□ -2.37
Sdc4O35988 AL929265.1-201ENSMUST00000213427 125 ntBASIC0.26□□□□□ -2.37
Sdc4O35988 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
Sdc4O35988 AC163033.1-201ENSMUST00000218608 157 ntBASIC0.26□□□□□ -2.37
Sdc4O35988 AC116589.9-201ENSMUST00000221462 908 ntBASIC0.26□□□□□ -2.37
Sdc4O35988 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC0.26□□□□□ -2.37
Sdc4O35988 AC154424.1-201ENSMUST00000225883 799 ntBASIC0.26□□□□□ -2.37
Sdc4O35988 Gm22704-201ENSMUST00000083027 137 ntBASIC0.26□□□□□ -2.37
Sdc4O35988 Mir1b-201ENSMUST00000117012 122 ntBASIC0.25□□□□□ -2.37
Sdc4O35988 Gm12143-201ENSMUST00000119666 332 ntBASIC0.25□□□□□ -2.37
Sdc4O35988 Gm14846-201ENSMUST00000121868 216 ntBASIC0.25□□□□□ -2.37
Sdc4O35988 Gm23025-201ENSMUST00000158769 111 ntBASIC0.25□□□□□ -2.37
Sdc4O35988 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC0.25□□□□□ -2.37
Sdc4O35988 Gm20257-202ENSMUST00000188643 130 ntBASIC0.25□□□□□ -2.37
Sdc4O35988 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC0.25□□□□□ -2.37
Sdc4O35988 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.25□□□□□ -2.37
Sdc4O35988 AC134334.1-201ENSMUST00000214277 255 ntBASIC0.25□□□□□ -2.37
Sdc4O35988 CT033781.2-201ENSMUST00000221113 153 ntBASIC0.25□□□□□ -2.37
Sdc4O35988 AC154636.2-201ENSMUST00000222538 161 ntBASIC0.25□□□□□ -2.37
Sdc4O35988 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.25□□□□□ -2.37
Sdc4O35988 Gm24208-201ENSMUST00000082783 135 ntBASIC0.25□□□□□ -2.37
Sdc4O35988 Gm24577-201ENSMUST00000158580 63 ntBASIC0.24□□□□□ -2.37
Sdc4O35988 Gm24277-201ENSMUST00000158661 104 ntBASIC0.24□□□□□ -2.37
Sdc4O35988 Gm22631-201ENSMUST00000179656 94 ntBASIC0.24□□□□□ -2.37
Sdc4O35988 Gm25121-201ENSMUST00000179846 79 ntBASIC0.24□□□□□ -2.37
Sdc4O35988 Gm38261-201ENSMUST00000192608 316 ntBASIC0.24□□□□□ -2.37
Sdc4O35988 Gm44923-201ENSMUST00000206673 85 ntBASIC0.24□□□□□ -2.37
Sdc4O35988 Gm45616-201ENSMUST00000211711 319 ntBASIC0.24□□□□□ -2.37
Sdc4O35988 AL772265.1-201ENSMUST00000214379 305 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms